RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C HDA3Q06623 655 aa5.97□□□□□ -1.45
ATG3YNR007C SLX8P40072 274 aa5.96□□□□□ -1.46
ATG3YNR007C SUM1P46676 1062 aa5.96□□□□□ -1.46
ATG3YNR007C AHP1P38013 176 aaKnown RBP5.95□□□□□ -1.46
ATG3YNR007C UTP7P40055 554 aaKnown RBP5.95□□□□□ -1.46
ATG3YNR007C CEM1P39525 442 aa5.94□□□□□ -1.46
ATG3YNR007C TY1A-DR3Q12441 440 aa5.94□□□□□ -1.46
ATG3YNR007C ICP55P40051 511 aa5.93□□□□□ -1.46
ATG3YNR007C ALA1P40825 983 aaKnown RBP5.93□□□□□ -1.46
ATG3YNR007C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
ATG3YNR007C RDS2P19541 446 aaKnown RBP5.92□□□□□ -1.46
ATG3YNR007C DIT1P21623 536 aa5.92□□□□□ -1.46
ATG3YNR007C BIM1P40013 344 aa5.92□□□□□ -1.46
ATG3YNR007C YMR265CQ03508 461 aaKnown RBP5.92□□□□□ -1.46
ATG3YNR007C KOG1P38873 1557 aa5.92□□□□□ -1.46
ATG3YNR007C JJJ2P46997 583 aa5.91□□□□□ -1.46
ATG3YNR007C TIF1P10081 395 aaKnown RBP5.9□□□□□ -1.46
ATG3YNR007C ATG32P40458 529 aa5.9□□□□□ -1.46
ATG3YNR007C MRX10Q05648 414 aa5.9□□□□□ -1.46
ATG3YNR007C IRE1P32361 1115 aa5.89□□□□□ -1.47
ATG3YNR007C AIM9P40053 627 aaKnown RBP5.89□□□□□ -1.47
ATG3YNR007C RPL34BP40525 121 aaKnown RBP5.89□□□□□ -1.47
ATG3YNR007C YFL034WP43564 1073 aa5.89□□□□□ -1.47
ATG3YNR007C KRE33P53914 1056 aaKnown RBP5.89□□□□□ -1.47
ATG3YNR007C SYT1Q06836 1226 aa5.89□□□□□ -1.47
ATG3YNR007C PUS1Q12211 544 aaKnown RBP5.89□□□□□ -1.47
ATG3YNR007C PHM7Q12252 991 aa5.89□□□□□ -1.47
ATG3YNR007C YDR461C-AQ2V2P7 80 aa5.89□□□□□ -1.47
ATG3YNR007C ENO1P00924 437 aaKnown RBP5.88□□□□□ -1.47
ATG3YNR007C SWI5P08153 709 aa5.88□□□□□ -1.47
ATG3YNR007C RTG2P32608 588 aaKnown RBP5.88□□□□□ -1.47
ATG3YNR007C LEO1P38439 464 aa5.88□□□□□ -1.47
ATG3YNR007C ADE12P80210 433 aaKnown RBP5.88□□□□□ -1.47
ATG3YNR007C AI1P03875 834 aa5.87□□□□□ -1.47
ATG3YNR007C YPQ2Q06328 317 aa5.87□□□□□ -1.47
ATG3YNR007C MDJ1P35191 511 aa5.86□□□□□ -1.47
ATG3YNR007C SHM1P37292 490 aaPredicted RBP5.86□□□□□ -1.47
ATG3YNR007C NSG2P53898 299 aa5.85□□□□□ -1.47
ATG3YNR007C THI72Q08579 599 aa5.85□□□□□ -1.47
ATG3YNR007C RPS6AP0CX37 236 aaKnown RBP5.84□□□□□ -1.47
ATG3YNR007C RPS6BP0CX38 236 aaPredicted RBP5.84□□□□□ -1.47
ATG3YNR007C TSC13Q99190 310 aa5.84□□□□□ -1.47
ATG3YNR007C MCM1P11746 286 aa5.83□□□□□ -1.48
ATG3YNR007C PDC6P26263 563 aaKnown RBP5.83□□□□□ -1.48
ATG3YNR007C PEP12P32854 288 aa5.83□□□□□ -1.48
ATG3YNR007C NTH2P35172 780 aa5.83□□□□□ -1.48
ATG3YNR007C YFL066CP43538 392 aa5.83□□□□□ -1.48
ATG3YNR007C PSH1Q12161 406 aa5.83□□□□□ -1.48
ATG3YNR007C SWR1Q05471 1514 aa5.83□□□□□ -1.48
ATG3YNR007C RPS31P05759 152 aaKnown RBP5.82□□□□□ -1.48
ATG3YNR007C PDI1P17967 522 aaKnown RBP5.82□□□□□ -1.48
ATG3YNR007C FPS1P23900 669 aa5.82□□□□□ -1.48
ATG3YNR007C MRPL16P38064 232 aa5.81□□□□□ -1.48
ATG3YNR007C LSB3P43603 459 aaKnown RBP5.8□□□□□ -1.48
ATG3YNR007C LEU1P07264 779 aaKnown RBP5.79□□□□□ -1.48
ATG3YNR007C SIS2P36024 562 aa5.79□□□□□ -1.48
ATG3YNR007C STB3Q12427 513 aa5.79□□□□□ -1.48
ATG3YNR007C YTA6P40328 754 aa5.78□□□□□ -1.48
ATG3YNR007C SPR3P41901 512 aa5.78□□□□□ -1.48
ATG3YNR007C GPM1P00950 247 aaKnown RBP5.77□□□□□ -1.49
ATG3YNR007C RPP1AP05318 106 aaPredicted RBP5.77□□□□□ -1.49
ATG3YNR007C CYT1P07143 309 aa5.77□□□□□ -1.49
ATG3YNR007C YNL165WP53891 406 aa5.77□□□□□ -1.49
ATG3YNR007C HAP4P14064 554 aa5.76□□□□□ -1.49
ATG3YNR007C PHO87P25360 923 aa5.76□□□□□ -1.49
ATG3YNR007C KTR7P40504 517 aa5.75□□□□□ -1.49
ATG3YNR007C SBE2P42223 864 aaKnown RBP5.75□□□□□ -1.49
ATG3YNR007C ALD2P47771 506 aa5.75□□□□□ -1.49
ATG3YNR007C ACS2P52910 683 aaKnown RBP5.75□□□□□ -1.49
ATG3YNR007C YPR053CQ6Q5F3 151 aa5.75□□□□□ -1.49
ATG3YNR007C RGP1P16664 663 aa5.74□□□□□ -1.49
ATG3YNR007C MLF3P32047 452 aa5.74□□□□□ -1.49
ATG3YNR007C TDA6Q06466 467 aa5.74□□□□□ -1.49
ATG3YNR007C GAS4Q08271 471 aa5.74□□□□□ -1.49
ATG3YNR007C Q0182Q9ZZW1 134 aa5.74□□□□□ -1.49
ATG3YNR007C KNS1P32350 737 aaPredicted RBP5.73□□□□□ -1.49
ATG3YNR007C YNR014WP53719 212 aa5.73□□□□□ -1.49
ATG3YNR007C TY1A-DR2Q03964 440 aaKnown RBP5.73□□□□□ -1.49
ATG3YNR007C PDC5P16467 563 aaKnown RBP5.72□□□□□ -1.49
ATG3YNR007C UBP1P25037 809 aa5.72□□□□□ -1.49
ATG3YNR007C CCT8P47079 568 aaKnown RBP5.72□□□□□ -1.49
ATG3YNR007C YMR187CQ03236 431 aa5.72□□□□□ -1.49
ATG3YNR007C GAL2P13181 574 aa5.71□□□□□ -1.5
ATG3YNR007C MET1P36150 593 aa5.71□□□□□ -1.5
ATG3YNR007C MCX1P38323 520 aaPredicted RBP5.71□□□□□ -1.5
ATG3YNR007C SKN7P38889 622 aa5.71□□□□□ -1.5
ATG3YNR007C UTP4Q06679 776 aaKnown RBP5.71□□□□□ -1.5
ATG3YNR007C NGR1P32831 672 aaKnown RBP5.7□□□□□ -1.5
ATG3YNR007C SCD5P34758 872 aa5.7□□□□□ -1.5
ATG3YNR007C MSC7P38694 644 aa5.7□□□□□ -1.5
ATG3YNR007C BOI2P39969 1040 aa5.7□□□□□ -1.5
ATG3YNR007C DMA2P53924 522 aa5.7□□□□□ -1.5
ATG3YNR007C ROM1P53046 1155 aa5.69□□□□□ -1.5
ATG3YNR007C MTO1P53070 669 aa5.68□□□□□ -1.5
ATG3YNR007C HEH2Q03281 663 aa5.68□□□□□ -1.5
ATG3YNR007C TTI1P36097 1038 aa5.67□□□□□ -1.5
ATG3YNR007C TGL4P36165 910 aa5.67□□□□□ -1.5
ATG3YNR007C SKP1P52286 194 aa5.67□□□□□ -1.5
ATG3YNR007C VAN1P23642 535 aa5.66□□□□□ -1.5
ATG3YNR007C HXT5P38695 592 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms