RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C MRF1P30775 413 aaPredicted RBP7.37□□□□□ -1.23
CCS1YMR038C YJL007CP47080 104 aa7.37□□□□□ -1.23
CCS1YMR038C YPR097WQ06839 1073 aa7.37□□□□□ -1.23
CCS1YMR038C BIM1P40013 344 aa7.36□□□□□ -1.23
CCS1YMR038C KXD1P53158 218 aa7.36□□□□□ -1.23
CCS1YMR038C BNR1P40450 1375 aa7.35□□□□□ -1.23
CCS1YMR038C HXT10P43581 546 aa7.35□□□□□ -1.23
CCS1YMR038C ALR1Q08269 859 aa7.35□□□□□ -1.23
CCS1YMR038C USO1P25386 1790 aa7.34□□□□□ -1.23
CCS1YMR038C TPD3P31383 635 aa7.34□□□□□ -1.23
CCS1YMR038C ATG32P40458 529 aa7.34□□□□□ -1.23
CCS1YMR038C ERG12P07277 443 aa7.33□□□□□ -1.24
CCS1YMR038C CST6P40535 587 aa7.33□□□□□ -1.24
CCS1YMR038C RRD1P40454 393 aaKnown RBP7.32□□□□□ -1.24
CCS1YMR038C URN1Q06525 465 aaKnown RBP7.32□□□□□ -1.24
CCS1YMR038C SEC7P11075 2009 aaKnown RBP7.31□□□□□ -1.24
CCS1YMR038C YDJ1P25491 409 aaKnown RBP7.31□□□□□ -1.24
CCS1YMR038C BDP1P46678 594 aa7.31□□□□□ -1.24
CCS1YMR038C YNL108CP53929 270 aa7.31□□□□□ -1.24
CCS1YMR038C SUP45P12385 437 aaKnown RBP7.3□□□□□ -1.24
CCS1YMR038C SPT5P27692 1063 aaKnown RBP7.3□□□□□ -1.24
CCS1YMR038C TIF1P10081 395 aaKnown RBP7.29□□□□□ -1.24
CCS1YMR038C AMS1P22855 1083 aa7.29□□□□□ -1.24
CCS1YMR038C NAF1P53919 492 aaKnown RBP7.29□□□□□ -1.24
CCS1YMR038C YEL077CQ3E7X8 1277 aa7.29□□□□□ -1.24
CCS1YMR038C FIG4P42837 879 aa7.28□□□□□ -1.24
CCS1YMR038C FRK1Q03002 865 aaPredicted RBP7.28□□□□□ -1.24
CCS1YMR038C RAS1P01119 309 aa7.27□□□□□ -1.25
CCS1YMR038C RLF2Q12495 606 aa7.27□□□□□ -1.25
CCS1YMR038C YBT1P32386 1661 aa7.27□□□□□ -1.25
CCS1YMR038C TY3B-GQ99315 1547 aa7.27□□□□□ -1.25
CCS1YMR038C PUS5Q06244 254 aa7.26□□□□□ -1.25
CCS1YMR038C YPR084WQ06821 456 aa7.26□□□□□ -1.25
CCS1YMR038C ENO2P00925 437 aaKnown RBP7.25□□□□□ -1.25
CCS1YMR038C VAC17P25591 423 aa7.25□□□□□ -1.25
CCS1YMR038C TEC1P18412 486 aa7.24□□□□□ -1.25
CCS1YMR038C THI12P42883 340 aa7.24□□□□□ -1.25
CCS1YMR038C THI5P43534 340 aa7.24□□□□□ -1.25
CCS1YMR038C THI11P47183 340 aa7.24□□□□□ -1.25
CCS1YMR038C THI13Q07748 340 aa7.24□□□□□ -1.25
CCS1YMR038C MCM16Q12262 181 aa7.24□□□□□ -1.25
CCS1YMR038C RPL34BP40525 121 aaKnown RBP7.23□□□□□ -1.25
CCS1YMR038C YSP2Q06681 1438 aa7.23□□□□□ -1.25
CCS1YMR038C GEA1P47102 1408 aaPredicted RBP7.22□□□□□ -1.25
CCS1YMR038C DPS1P04802 557 aaKnown RBP7.22□□□□□ -1.25
CCS1YMR038C RTG2P32608 588 aaKnown RBP7.22□□□□□ -1.25
CCS1YMR038C RIM21P48565 533 aa7.22□□□□□ -1.25
CCS1YMR038C CAT8P39113 1433 aa7.21□□□□□ -1.25
CCS1YMR038C ISF1P32488 338 aa7.21□□□□□ -1.26
CCS1YMR038C CLA4P48562 842 aa7.21□□□□□ -1.26
CCS1YMR038C YPR204WQ08995 1032 aa7.21□□□□□ -1.26
CCS1YMR038C MRX10Q05648 414 aa7.2□□□□□ -1.26
CCS1YMR038C FRA1Q07825 749 aa7.2□□□□□ -1.26
CCS1YMR038C GUT2P32191 649 aa7.19□□□□□ -1.26
CCS1YMR038C EMP47P43555 445 aa7.19□□□□□ -1.26
CCS1YMR038C ENO1P00924 437 aaKnown RBP7.18□□□□□ -1.26
CCS1YMR038C KIP2P28743 706 aa7.18□□□□□ -1.26
CCS1YMR038C STE20Q03497 939 aaKnown RBP7.18□□□□□ -1.26
CCS1YMR038C RDS2P19541 446 aaKnown RBP7.17□□□□□ -1.26
CCS1YMR038C IXR1P33417 597 aa7.17□□□□□ -1.26
CCS1YMR038C YPP1P46951 817 aa7.17□□□□□ -1.26
CCS1YMR038C SYH1Q02875 849 aaKnown RBP7.17□□□□□ -1.26
CCS1YMR038C HED1Q03937 162 aa7.16□□□□□ -1.26
CCS1YMR038C APL6P46682 809 aa7.15□□□□□ -1.26
CCS1YMR038C AIR1P40507 360 aaKnown RBP7.14□□□□□ -1.27
CCS1YMR038C TY1B-NL2Q99337 1749 aaKnown RBP7.13□□□□□ -1.27
CCS1YMR038C TTI1P36097 1038 aa7.13□□□□□ -1.27
CCS1YMR038C MRX12P47084 519 aa7.13□□□□□ -1.27
CCS1YMR038C MRT4P33201 236 aaKnown RBP7.11□□□□□ -1.27
CCS1YMR038C EMW1P42842 904 aaKnown RBP7.11□□□□□ -1.27
CCS1YMR038C APP1P53933 587 aa7.11□□□□□ -1.27
CCS1YMR038C MET32Q12041 191 aa7.11□□□□□ -1.27
CCS1YMR038C PEP12P32854 288 aa7.1□□□□□ -1.27
CCS1YMR038C IPL1P38991 367 aa7.1□□□□□ -1.27
CCS1YMR038C CPS1P27614 576 aa7.09□□□□□ -1.27
CCS1YMR038C CDC4P07834 779 aa7.08□□□□□ -1.28
CCS1YMR038C SRC1Q03707 834 aa7.08□□□□□ -1.28
CCS1YMR038C IML1P47170 1584 aa7.08□□□□□ -1.28
CCS1YMR038C SOH1P38633 127 aa7.07□□□□□ -1.28
CCS1YMR038C UTP13Q05946 817 aaKnown RBP7.07□□□□□ -1.28
CCS1YMR038C ENV9Q08651 330 aa7.07□□□□□ -1.28
CCS1YMR038C HAP1P0CE41 1502 aa7.06□□□□□ -1.28
CCS1YMR038C SIS2P36024 562 aa7.06□□□□□ -1.28
CCS1YMR038C HAL5P38970 855 aaKnown RBP7.06□□□□□ -1.28
CCS1YMR038C ATG20Q07528 640 aa7.06□□□□□ -1.28
CCS1YMR038C YBL086CP38177 466 aa7.05□□□□□ -1.28
CCS1YMR038C ATG3P40344 310 aa7.05□□□□□ -1.28
CCS1YMR038C ISR1Q06098 443 aaKnown RBP7.05□□□□□ -1.28
CCS1YMR038C NUP188P52593 1655 aaKnown RBP7.05□□□□□ -1.28
CCS1YMR038C SUB2Q07478 446 aaKnown RBP7.04□□□□□ -1.28
CCS1YMR038C SRB8P25648 1427 aa7.03□□□□□ -1.28
CCS1YMR038C AFT1P22149 690 aa7.03□□□□□ -1.28
CCS1YMR038C SSA4P22202 642 aaKnown RBP7.03□□□□□ -1.28
CCS1YMR038C MKS1P34072 584 aa7.03□□□□□ -1.28
CCS1YMR038C TYS1P36421 394 aaKnown RBP7.03□□□□□ -1.28
CCS1YMR038C FBP26P32604 452 aa7.02□□□□□ -1.29
CCS1YMR038C ASH1P34233 588 aa7.02□□□□□ -1.29
CCS1YMR038C TGL4P36165 910 aa7.02□□□□□ -1.29
CCS1YMR038C KTR7P40504 517 aa7.02□□□□□ -1.29
CCS1YMR038C VMR1P38735 1592 aa7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms