RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	AI4	P03878	556 aa		2.19	□□□□□ -2.06
YCS4	YLR272C	PRT1	P06103	763 aa	Known RBP	2.19	□□□□□ -2.06
YCS4	YLR272C	UGA3	P26370	528 aa		2.19	□□□□□ -2.06
YCS4	YLR272C	TPS3	P38426	1054 aa	Known RBP	2.19	□□□□□ -2.06
YCS4	YLR272C	PEX13	P80667	386 aa		2.19	□□□□□ -2.06
YCS4	YLR272C	NUT2	Q06213	157 aa		2.19	□□□□□ -2.06
YCS4	YLR272C	DLD1	P32891	587 aa		2.19	□□□□□ -2.06
YCS4	YLR272C	PET112	P33893	541 aa		2.19	□□□□□ -2.06
YCS4	YLR272C	MCM7	P38132	845 aa		2.19	□□□□□ -2.06
YCS4	YLR272C	BOL3	P39724	118 aa		2.19	□□□□□ -2.06
YCS4	YLR272C	SAM3	Q08986	587 aa		2.19	□□□□□ -2.06
YCS4	YLR272C	PHO87	P25360	923 aa		2.18	□□□□□ -2.06
YCS4	YLR272C	HST3	P53687	447 aa		2.18	□□□□□ -2.06
YCS4	YLR272C	JIP4	Q03361	876 aa		2.18	□□□□□ -2.06
YCS4	YLR272C	OSH2	Q12451	1283 aa		2.18	□□□□□ -2.06
YCS4	YLR272C	NUP145	P49687	1317 aa		2.18	□□□□□ -2.06
YCS4	YLR272C	MET6	P05694	767 aa	Known RBP	2.18	□□□□□ -2.06
YCS4	YLR272C	ARE1	P25628	610 aa		2.18	□□□□□ -2.06
YCS4	YLR272C	Q0182	Q9ZZW1	134 aa		2.18	□□□□□ -2.06
YCS4	YLR272C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	2.18	□□□□□ -2.06	not detected
YCS4	YLR272C	ALD3	P54114	506 aa		2.18	□□□□□ -2.06
YCS4	YLR272C	TSC13	Q99190	310 aa		2.18	□□□□□ -2.06
YCS4	YLR272C	YMR074C	Q04773	145 aa		2.17	□□□□□ -2.06
YCS4	YLR272C	MRX10	Q05648	414 aa		2.17	□□□□□ -2.06
YCS4	YLR272C	NOC3	Q07896	663 aa	Predicted RBP	2.17	□□□□□ -2.06
YCS4	YLR272C	GAS4	Q08271	471 aa		2.17	□□□□□ -2.06
YCS4	YLR272C	NOP8	Q08287	484 aa	Predicted RBP	2.17	□□□□□ -2.06
YCS4	YLR272C	MSC6	Q08818	692 aa	Known RBP	2.17	□□□□□ -2.06
YCS4	YLR272C	SRS2	P12954	1174 aa		2.17	□□□□□ -2.06
YCS4	YLR272C	YEF3	P16521	1044 aa	Known RBP	2.17	□□□□□ -2.06
YCS4	YLR272C	CLN2	P20438	545 aa		2.17	□□□□□ -2.06
YCS4	YLR272C	RAD27	P26793	382 aa		2.17	□□□□□ -2.06
YCS4	YLR272C	ROM1	P53046	1155 aa		2.17	□□□□□ -2.06
YCS4	YLR272C	YDR344C	Q05510	147 aa		2.17	□□□□□ -2.06
YCS4	YLR272C	MSB4	Q12317	492 aa		2.17	□□□□□ -2.06
YCS4	YLR272C	RPP2B	P02400	110 aa	Known RBP	2.17	□□□□□ -2.06
YCS4	YLR272C	DSS1	P39112	969 aa		2.17	□□□□□ -2.06
YCS4	YLR272C	PDC1	P06169	563 aa	Known RBP	2.16	□□□□□ -2.06
YCS4	YLR272C	AHP1	P38013	176 aa	Known RBP	2.16	□□□□□ -2.06
YCS4	YLR272C	HAL5	P38970	855 aa	Known RBP	2.16	□□□□□ -2.06
YCS4	YLR272C	PPH3	P32345	308 aa		2.16	□□□□□ -2.06
YCS4	YLR272C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.16	□□□□□ -2.06	not detected
YCS4	YLR272C	NYV1	Q12255	253 aa		2.16	□□□□□ -2.06
YCS4	YLR272C	OSW7	P43611	510 aa		2.16	□□□□□ -2.06
YCS4	YLR272C	ADR1	P07248	1323 aa		2.15	□□□□□ -2.06
YCS4	YLR272C	SEC23	P15303	768 aa	Known RBP	2.15	□□□□□ -2.06
YCS4	YLR272C	SRM1	P21827	482 aa		2.15	□□□□□ -2.06
YCS4	YLR272C	RPA14	P50106	137 aa		2.15	□□□□□ -2.06
YCS4	YLR272C	YGR125W	P53273	1036 aa		2.15	□□□□□ -2.06
YCS4	YLR272C	FRT1	Q99332	602 aa		2.15	□□□□□ -2.06
YCS4	YLR272C	RAD4	P14736	754 aa		2.15	□□□□□ -2.07
YCS4	YLR272C	MDJ2	P42834	146 aa		2.15	□□□□□ -2.07
YCS4	YLR272C	HLJ1	P48353	224 aa		2.15	□□□□□ -2.07
YCS4	YLR272C	SWI5	P08153	709 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	LDH1	P38139	375 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	HUL5	P53119	910 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	GCR2	Q01722	534 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	WHI5	Q12416	295 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	YOL098C	Q12496	1037 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	CIC1	P38779	376 aa	Known RBP	2.14	□□□□□ -2.07
YCS4	YLR272C	RAD55	P38953	406 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	MNN1	P39106	762 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	HXT10	P43581	546 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	SYH1	Q02875	849 aa	Known RBP	2.14	□□□□□ -2.07
YCS4	YLR272C	BUD20	Q08004	166 aa	Predicted RBP	2.14	□□□□□ -2.07
YCS4	YLR272C	ISW1	P38144	1129 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	YEN1	P40028	759 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	MRPS18	P42847	217 aa		2.14	□□□□□ -2.07
YCS4	YLR272C	PUF6	Q04373	656 aa	Known RBP	2.14	□□□□□ -2.07
YCS4	YLR272C	RDS2	P19541	446 aa	Known RBP	2.13	□□□□□ -2.07
YCS4	YLR272C	YPR097W	Q06839	1073 aa		2.13	□□□□□ -2.07
YCS4	YLR272C	INP54	Q08227	384 aa	Known RBP	2.13	□□□□□ -2.07
YCS4	YLR272C	SIT4	P20604	311 aa		2.13	□□□□□ -2.07
YCS4	YLR272C	YTA7	P40340	1379 aa		2.13	□□□□□ -2.07
YCS4	YLR272C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	2.13	□□□□□ -2.07	not detected
YCS4	YLR272C	SPR3	P41901	512 aa		2.13	□□□□□ -2.07
YCS4	YLR272C	DAS1	P47005	663 aa		2.13	□□□□□ -2.07
YCS4	YLR272C	FAA4	P47912	694 aa	Known RBP	2.13	□□□□□ -2.07
YCS4	YLR272C	UBX5	Q06682	500 aa		2.13	□□□□□ -2.07
YCS4	YLR272C	WTM2	Q12206	467 aa		2.13	□□□□□ -2.07
YCS4	YLR272C	GCD6	P32501	712 aa	Known RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	ALO1	P54783	526 aa	Known RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	SPO20	Q04359	397 aa		2.12	□□□□□ -2.07
YCS4	YLR272C	POB3	Q04636	552 aa	Known RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	NAP1	P25293	417 aa	Known RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	NFS1	P25374	497 aa		2.12	□□□□□ -2.07
YCS4	YLR272C	MCM5	P29496	775 aa	Known RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	TYS1	P36421	394 aa	Known RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	YBR284W	P38150	797 aa		2.12	□□□□□ -2.07
YCS4	YLR272C	QDR2	P40474	542 aa		2.12	□□□□□ -2.07
YCS4	YLR272C	PTK2	P47116	818 aa	Known RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	RTF1	P53064	558 aa		2.12	□□□□□ -2.07
YCS4	YLR272C	SEN54	Q02825	467 aa	Predicted RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	YLR225C	Q05948	407 aa	Known RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	MNL2	Q12205	849 aa		2.12	□□□□□ -2.07
YCS4	YLR272C	DPS1	P04802	557 aa	Known RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	TOM70	P07213	617 aa	Known RBP	2.12	□□□□□ -2.07
YCS4	YLR272C	SPT23	P35210	1082 aa		2.12	□□□□□ -2.07
YCS4	YLR272C	SAP190	P36123	1033 aa		2.12	□□□□□ -2.07
YCS4	YLR272C	PAM1	P37304	830 aa	Known RBP	2.12	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms