RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W TOP1P04786 769 aa3.33□□□□□ -1.88
HRD3YLR207W TRL1P09880 827 aaKnown RBP3.33□□□□□ -1.88
HRD3YLR207W VAC17P25591 423 aa3.33□□□□□ -1.88
HRD3YLR207W IXR1P33417 597 aa3.33□□□□□ -1.88
HRD3YLR207W NTH2P35172 780 aa3.33□□□□□ -1.88
HRD3YLR207W OYE2Q03558 400 aaKnown RBP3.33□□□□□ -1.88
HRD3YLR207W ATG20Q07528 640 aa3.33□□□□□ -1.88
HRD3YLR207W UFD4P33202 1483 aa3.33□□□□□ -1.88
HRD3YLR207W BOL3P39724 118 aa3.33□□□□□ -1.88
HRD3YLR207W SPR3P41901 512 aa3.33□□□□□ -1.88
HRD3YLR207W ALD4P46367 519 aaKnown RBP3.33□□□□□ -1.88
HRD3YLR207W CYT1P07143 309 aa3.32□□□□□ -1.88
HRD3YLR207W TBS1P38114 1094 aa3.32□□□□□ -1.88
HRD3YLR207W APL6P46682 809 aa3.32□□□□□ -1.88
HRD3YLR207W HDA3Q06623 655 aa3.32□□□□□ -1.88
HRD3YLR207W GYP1Q08484 637 aa3.32□□□□□ -1.88
HRD3YLR207W RPP2BP02400 110 aaKnown RBP3.32□□□□□ -1.88
HRD3YLR207W RRD1P40454 393 aaKnown RBP3.32□□□□□ -1.88
HRD3YLR207W NUT2Q06213 157 aa3.32□□□□□ -1.88
HRD3YLR207W JIP5Q06214 492 aaPredicted RBP3.32□□□□□ -1.88
HRD3YLR207W SSK2P53599 1579 aa3.32□□□□□ -1.88
HRD3YLR207W DAT1P13483 248 aaKnown RBP3.31□□□□□ -1.88
HRD3YLR207W SEC8P32855 1065 aa3.31□□□□□ -1.88
HRD3YLR207W NNF1P47149 201 aa3.31□□□□□ -1.88
HRD3YLR207W RPS6AP0CX37 236 aaKnown RBP3.31□□□□□ -1.88
HRD3YLR207W RPS6BP0CX38 236 aaPredicted RBP3.31□□□□□ -1.88
HRD3YLR207W ATE1P16639 503 aa3.31□□□□□ -1.88
HRD3YLR207W TPD3P31383 635 aa3.3□□□□□ -1.88
HRD3YLR207W UTR2P32623 467 aa3.3□□□□□ -1.88
HRD3YLR207W SPC42P36094 363 aa3.3□□□□□ -1.88
HRD3YLR207W HAL5P38970 855 aaKnown RBP3.3□□□□□ -1.88
HRD3YLR207W FPR4Q06205 392 aaPredicted RBP3.3□□□□□ -1.88
HRD3YLR207W WHI5Q12416 295 aa3.3□□□□□ -1.88
HRD3YLR207W OCA5P38738 679 aa3.3□□□□□ -1.88
HRD3YLR207W FOX2Q02207 900 aaKnown RBP3.3□□□□□ -1.88
HRD3YLR207W SIN3P22579 1536 aa3.29□□□□□ -1.88
HRD3YLR207W ESP1Q03018 1630 aa3.29□□□□□ -1.88
HRD3YLR207W SAS4Q04003 481 aa3.29□□□□□ -1.88
HRD3YLR207W LSO1Q3E827 93 aa3.29□□□□□ -1.88
HRD3YLR207W BPT1P14772 1559 aa3.29□□□□□ -1.88
HRD3YLR207W MRF1P30775 413 aaPredicted RBP3.29□□□□□ -1.88
HRD3YLR207W RRP15Q06511 250 aaPredicted RBP3.29□□□□□ -1.88
HRD3YLR207W UBP1P25037 809 aa3.28□□□□□ -1.88
HRD3YLR207W ISC10P32645 267 aa3.28□□□□□ -1.88
HRD3YLR207W MKS1P34072 584 aa3.28□□□□□ -1.88
HRD3YLR207W MET1P36150 593 aa3.28□□□□□ -1.88
HRD3YLR207W MAD1P40957 749 aa3.28□□□□□ -1.88
HRD3YLR207W YAF9P53930 226 aa3.28□□□□□ -1.88
HRD3YLR207W APP1P53933 587 aa3.28□□□□□ -1.88
HRD3YLR207W DOS2P54858 310 aa3.28□□□□□ -1.88
HRD3YLR207W UFD2P54860 961 aa3.28□□□□□ -1.88
HRD3YLR207W SYH1Q02875 849 aaKnown RBP3.28□□□□□ -1.88
HRD3YLR207W TRS120Q04183 1289 aa3.28□□□□□ -1.88
HRD3YLR207W YML082WQ04533 649 aaKnown RBP3.28□□□□□ -1.88
HRD3YLR207W SWI5P08153 709 aa3.28□□□□□ -1.88
HRD3YLR207W GCD6P32501 712 aaKnown RBP3.28□□□□□ -1.88
HRD3YLR207W PEP7P32609 515 aa3.28□□□□□ -1.88
HRD3YLR207W NGR1P32831 672 aaKnown RBP3.28□□□□□ -1.88
HRD3YLR207W NMD2P38798 1089 aaKnown RBP3.28□□□□□ -1.88
HRD3YLR207W FRT1Q99332 602 aa3.28□□□□□ -1.88
HRD3YLR207W SCC2Q04002 1493 aa3.27□□□□□ -1.89
HRD3YLR207W RTS3P53289 263 aa3.27□□□□□ -1.89
HRD3YLR207W STU1P38198 1513 aa3.27□□□□□ -1.89
HRD3YLR207W BUD31P25337 157 aaPredicted RBP3.27□□□□□ -1.89
HRD3YLR207W CST6P40535 587 aa3.27□□□□□ -1.89
HRD3YLR207W YJR107WP47145 328 aa3.27□□□□□ -1.89
HRD3YLR207W FAR11P53917 953 aa3.27□□□□□ -1.89
HRD3YLR207W ISU1Q03020 165 aa3.27□□□□□ -1.89
HRD3YLR207W OXR1Q08952 273 aa3.27□□□□□ -1.89
HRD3YLR207W YPR015CQ12531 247 aa3.27□□□□□ -1.89
HRD3YLR207W YPK9Q12697 1472 aa3.26□□□□□ -1.89
HRD3YLR207W CLN2P20438 545 aa3.26□□□□□ -1.89
HRD3YLR207W MET4P32389 672 aa3.26□□□□□ -1.89
HRD3YLR207W RPT1P33299 467 aaKnown RBP3.26□□□□□ -1.89
HRD3YLR207W DLD3P39976 496 aaKnown RBP3.26□□□□□ -1.89
HRD3YLR207W FKH1P40466 484 aa3.26□□□□□ -1.89
HRD3YLR207W SUT1P53032 299 aaKnown RBP3.26□□□□□ -1.89
HRD3YLR207W YDR344CQ05510 147 aa3.26□□□□□ -1.89
HRD3YLR207W SUV3P32580 737 aa3.26□□□□□ -1.89
HRD3YLR207W FBP26P32604 452 aa3.26□□□□□ -1.89
HRD3YLR207W PPG1P32838 368 aa3.26□□□□□ -1.89
HRD3YLR207W YBR197CP38306 217 aa3.26□□□□□ -1.89
HRD3YLR207W PRE3P38624 215 aa3.26□□□□□ -1.89
HRD3YLR207W EMW1P42842 904 aaKnown RBP3.26□□□□□ -1.89
HRD3YLR207W YJL171CP46992 396 aa3.26□□□□□ -1.89
HRD3YLR207W SAM37P50110 327 aa3.26□□□□□ -1.89
HRD3YLR207W BDS1Q08347 646 aa3.26□□□□□ -1.89
HRD3YLR207W PUS5Q06244 254 aa3.25□□□□□ -1.89
HRD3YLR207W STB3Q12427 513 aa3.25□□□□□ -1.89
HRD3YLR207W MOD5P07884 428 aa3.25□□□□□ -1.89
HRD3YLR207W CIC1P38779 376 aaKnown RBP3.25□□□□□ -1.89
HRD3YLR207W NUG1P40010 520 aaKnown RBP3.25□□□□□ -1.89
HRD3YLR207W RNH70P53331 553 aa3.25□□□□□ -1.89
HRD3YLR207W CWC24P53769 259 aa3.25□□□□□ -1.89
HRD3YLR207W FRK1Q03002 865 aaPredicted RBP3.25□□□□□ -1.89
HRD3YLR207W WTM2Q12206 467 aa3.25□□□□□ -1.89
HRD3YLR207W BMT6Q12291 365 aa3.25□□□□□ -1.89
HRD3YLR207W SMC1P32908 1225 aa3.24□□□□□ -1.89
HRD3YLR207W RRP14P36080 434 aaKnown RBP3.24□□□□□ -1.89
HRD3YLR207W BOI1P38041 980 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms