RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	CYT1	P07143	309 aa		3.24	□□□□□ -1.89
RIC1	YLR039C	FBP26	P32604	452 aa		3.24	□□□□□ -1.89
RIC1	YLR039C	UBP1	P25037	809 aa		3.24	□□□□□ -1.89
RIC1	YLR039C	MKS1	P34072	584 aa		3.24	□□□□□ -1.89
RIC1	YLR039C	TRS33	Q99394	268 aa		3.24	□□□□□ -1.89
RIC1	YLR039C	SPT2	P06843	333 aa	Predicted RBP	3.23	□□□□□ -1.89
RIC1	YLR039C	MRF1	P30775	413 aa	Predicted RBP	3.23	□□□□□ -1.89
RIC1	YLR039C	UTR2	P32623	467 aa		3.23	□□□□□ -1.89
RIC1	YLR039C	NGR1	P32831	672 aa	Known RBP	3.23	□□□□□ -1.89
RIC1	YLR039C	YBR197C	P38306	217 aa		3.23	□□□□□ -1.89
RIC1	YLR039C	YFL034W	P43564	1073 aa		3.23	□□□□□ -1.89
RIC1	YLR039C	CAB1	Q04430	367 aa		3.23	□□□□□ -1.89
RIC1	YLR039C	KTR2	P33550	425 aa		3.23	□□□□□ -1.89
RIC1	YLR039C	FOX2	Q02207	900 aa	Known RBP	3.23	□□□□□ -1.89
RIC1	YLR039C	DFG5	Q05031	458 aa		3.23	□□□□□ -1.89
RIC1	YLR039C	DAT1	P13483	248 aa	Known RBP	3.22	□□□□□ -1.89
RIC1	YLR039C	RPB10	P22139	70 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	SNU71	P53207	620 aa	Known RBP	3.22	□□□□□ -1.89
RIC1	YLR039C	LSO1	Q3E827	93 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	SEC20	P28791	383 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	ISC10	P32645	267 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	MRT4	P33201	236 aa	Known RBP	3.22	□□□□□ -1.89
RIC1	YLR039C	YBL086C	P38177	466 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	UTP7	P40055	554 aa	Known RBP	3.22	□□□□□ -1.89
RIC1	YLR039C	THI12	P42883	340 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	THI5	P43534	340 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	POL32	P47110	350 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	THI11	P47183	340 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	THI13	Q07748	340 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	GPI13	Q07830	1017 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	STE6	P12866	1290 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	MET4	P32389	672 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	PPX1	P38698	397 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	WTM2	Q12206	467 aa		3.22	□□□□□ -1.89
RIC1	YLR039C	ORC1	P54784	914 aa	Predicted RBP	3.21	□□□□□ -1.9
RIC1	YLR039C	ACF4	P47129	309 aa		3.21	□□□□□ -1.9
RIC1	YLR039C	YPQ2	Q06328	317 aa		3.21	□□□□□ -1.9
RIC1	YLR039C	HXT5	P38695	592 aa		3.2	□□□□□ -1.9
RIC1	YLR039C	STB3	Q12427	513 aa		3.2	□□□□□ -1.9
RIC1	YLR039C	MET32	Q12041	191 aa		3.2	□□□□□ -1.9
RIC1	YLR039C	NOP7	P53261	605 aa	Known RBP	3.2	□□□□□ -1.9
RIC1	YLR039C	YNL165W	P53891	406 aa		3.2	□□□□□ -1.9
RIC1	YLR039C	MNL2	Q12205	849 aa		3.2	□□□□□ -1.9
RIC1	YLR039C	RAS1	P01119	309 aa		3.19	□□□□□ -1.9
RIC1	YLR039C	SEC8	P32855	1065 aa		3.19	□□□□□ -1.9
RIC1	YLR039C	AIR1	P40507	360 aa	Known RBP	3.19	□□□□□ -1.9
RIC1	YLR039C	APC11	Q12157	165 aa		3.19	□□□□□ -1.9
RIC1	YLR039C	CWH41	P53008	833 aa		3.19	□□□□□ -1.9
RIC1	YLR039C	BDS1	Q08347	646 aa		3.19	□□□□□ -1.9
RIC1	YLR039C	TBS1	P38114	1094 aa		3.18	□□□□□ -1.9
RIC1	YLR039C	MET10	P39692	1035 aa		3.18	□□□□□ -1.9
RIC1	YLR039C	BCK2	P33306	851 aa		3.18	□□□□□ -1.9
RIC1	YLR039C	SUT1	P53032	299 aa	Known RBP	3.18	□□□□□ -1.9
RIC1	YLR039C	OYE2	Q03558	400 aa	Known RBP	3.18	□□□□□ -1.9
RIC1	YLR039C	HED1	Q03937	162 aa		3.18	□□□□□ -1.9
RIC1	YLR039C	TRS120	Q04183	1289 aa		3.18	□□□□□ -1.9
RIC1	YLR039C	AMS1	P22855	1083 aa		3.18	□□□□□ -1.9
RIC1	YLR039C	FYV10	P40492	516 aa		3.18	□□□□□ -1.9
RIC1	YLR039C	SUM1	P46676	1062 aa		3.18	□□□□□ -1.9
RIC1	YLR039C	MRPL33	P20084	86 aa		3.17	□□□□□ -1.9
RIC1	YLR039C	MET1	P36150	593 aa		3.17	□□□□□ -1.9
RIC1	YLR039C	ASF1	P32447	279 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	TOS4	Q06266	489 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	Q0182	Q9ZZW1	134 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	PHO4	P07270	312 aa	Known RBP	3.16	□□□□□ -1.9
RIC1	YLR039C	MCM2	P29469	868 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	YJR107W	P47145	328 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	SPR28	Q04921	423 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	VMA3	P25515	160 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	MLF3	P32047	452 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	SHM1	P37292	490 aa	Predicted RBP	3.16	□□□□□ -1.9
RIC1	YLR039C	SSN3	P39073	555 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	XDJ1	P39102	459 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	DAK2	P43550	591 aa		3.16	□□□□□ -1.9
RIC1	YLR039C	MCM1	P11746	286 aa		3.15	□□□□□ -1.9
RIC1	YLR039C	RPT1	P33299	467 aa	Known RBP	3.15	□□□□□ -1.9
RIC1	YLR039C	SPR3	P41901	512 aa		3.15	□□□□□ -1.9
RIC1	YLR039C	RPS31	P05759	152 aa	Known RBP	3.15	□□□□□ -1.91
RIC1	YLR039C	TY1A-DR3	Q12441	440 aa		3.15	□□□□□ -1.91
RIC1	YLR039C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
RIC1	YLR039C	DLD3	P39976	496 aa	Known RBP	3.14	□□□□□ -1.91
RIC1	YLR039C	MAG2	Q06436	670 aa	Known RBP	3.14	□□□□□ -1.91
RIC1	YLR039C	DLD1	P32891	587 aa		3.14	□□□□□ -1.91
RIC1	YLR039C	ASH1	P34233	588 aa		3.13	□□□□□ -1.91
RIC1	YLR039C	SCD5	P34758	872 aa		3.13	□□□□□ -1.91
RIC1	YLR039C	MGE1	P38523	228 aa		3.13	□□□□□ -1.91
RIC1	YLR039C	QDR2	P40474	542 aa		3.13	□□□□□ -1.91
RIC1	YLR039C	ALA1	P40825	983 aa	Known RBP	3.13	□□□□□ -1.91
RIC1	YLR039C	AAD14	P42884	376 aa		3.13	□□□□□ -1.91
RIC1	YLR039C	JIP5	Q06214	492 aa	Predicted RBP	3.13	□□□□□ -1.91
RIC1	YLR039C	UGA3	P26370	528 aa		3.13	□□□□□ -1.91
RIC1	YLR039C	HXT8	P40886	569 aa		3.13	□□□□□ -1.91
RIC1	YLR039C	RGD2	P43556	714 aa		3.13	□□□□□ -1.91
RIC1	YLR039C	JJJ2	P46997	583 aa		3.13	□□□□□ -1.91
RIC1	YLR039C	UFD2	P54860	961 aa		3.13	□□□□□ -1.91
RIC1	YLR039C	MSN1	P22148	382 aa		3.12	□□□□□ -1.91
RIC1	YLR039C	SLA1	P32790	1244 aa		3.12	□□□□□ -1.91
RIC1	YLR039C	BSD2	P38356	321 aa		3.12	□□□□□ -1.91
RIC1	YLR039C	YNL011C	P53980	444 aa		3.12	□□□□□ -1.91
RIC1	YLR039C	RPP2B	P02400	110 aa	Known RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms