RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W YTA7P40340 1379 aa6.09□□□□□ -1.43
TFA1YKL028W CPS1P27614 576 aa6.08□□□□□ -1.44
TFA1YKL028W DAL1P32375 460 aa6.08□□□□□ -1.44
TFA1YKL028W CEM1P39525 442 aa6.08□□□□□ -1.44
TFA1YKL028W TTI1P36097 1038 aa6.08□□□□□ -1.44
TFA1YKL028W YFL066CP43538 392 aa6.08□□□□□ -1.44
TFA1YKL028W NAF1P53919 492 aaKnown RBP6.08□□□□□ -1.44
TFA1YKL028W FRA1Q07825 749 aa6.08□□□□□ -1.44
TFA1YKL028W AI1P03875 834 aa6.07□□□□□ -1.44
TFA1YKL028W NOB1Q08444 459 aaKnown RBP6.07□□□□□ -1.44
TFA1YKL028W RPP2BP02400 110 aaKnown RBP6.06□□□□□ -1.44
TFA1YKL028W BRN1P38170 754 aa6.06□□□□□ -1.44
TFA1YKL028W THI72Q08579 599 aa6.06□□□□□ -1.44
TFA1YKL028W UBP15P50101 1230 aa6.05□□□□□ -1.44
TFA1YKL028W STE20Q03497 939 aaKnown RBP6.05□□□□□ -1.44
TFA1YKL028W DOS2P54858 310 aa6.04□□□□□ -1.44
TFA1YKL028W OCA5P38738 679 aa6.02□□□□□ -1.45
TFA1YKL028W CCT8P47079 568 aaKnown RBP6.02□□□□□ -1.45
TFA1YKL028W YMR265CQ03508 461 aaKnown RBP6.02□□□□□ -1.45
TFA1YKL028W SYT1Q06836 1226 aa6.02□□□□□ -1.45
TFA1YKL028W WTM2Q12206 467 aa6.02□□□□□ -1.45
TFA1YKL028W HAT1Q12341 374 aa6.02□□□□□ -1.45
TFA1YKL028W TY1A-DR3Q12441 440 aa6.02□□□□□ -1.45
TFA1YKL028W YPR053CQ6Q5F3 151 aa6.02□□□□□ -1.45
TFA1YKL028W DIT1P21623 536 aa6.01□□□□□ -1.45
TFA1YKL028W RTG2P32608 588 aaKnown RBP6.01□□□□□ -1.45
TFA1YKL028W YBL036CP38197 257 aa6.01□□□□□ -1.45
TFA1YKL028W MSN5P52918 1224 aa6.01□□□□□ -1.45
TFA1YKL028W BIO2P32451 375 aa6□□□□□ -1.45
TFA1YKL028W SLA1P32790 1244 aa6□□□□□ -1.45
TFA1YKL028W SSN3P39073 555 aa6□□□□□ -1.45
TFA1YKL028W ADE12P80210 433 aaKnown RBP6□□□□□ -1.45
TFA1YKL028W ISR1Q06098 443 aaKnown RBP6□□□□□ -1.45
TFA1YKL028W ASF1P32447 279 aa5.99□□□□□ -1.45
TFA1YKL028W SPC42P36094 363 aa5.99□□□□□ -1.45
TFA1YKL028W APL6P46682 809 aa5.99□□□□□ -1.45
TFA1YKL028W SPT2P06843 333 aaPredicted RBP5.99□□□□□ -1.45
TFA1YKL028W UTR2P32623 467 aa5.99□□□□□ -1.45
TFA1YKL028W AHP1P38013 176 aaKnown RBP5.99□□□□□ -1.45
TFA1YKL028W SBE2P42223 864 aaKnown RBP5.99□□□□□ -1.45
TFA1YKL028W FAR11P53917 953 aa5.99□□□□□ -1.45
TFA1YKL028W MCM16Q12262 181 aa5.99□□□□□ -1.45
TFA1YKL028W YDR461C-AQ2V2P7 80 aa5.99□□□□□ -1.45
TFA1YKL028W PUP1P25043 261 aa5.98□□□□□ -1.45
TFA1YKL028W ISF1P32488 338 aa5.98□□□□□ -1.45
TFA1YKL028W EMP47P43555 445 aa5.98□□□□□ -1.45
TFA1YKL028W KRE33P53914 1056 aaKnown RBP5.98□□□□□ -1.45
TFA1YKL028W YML083CQ04526 418 aa5.98□□□□□ -1.45
TFA1YKL028W NRD1P53617 575 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45 RIP-Chip
TFA1YKL028W STM1P39015 273 aaKnown RBP5.96□□□□□ -1.46
TFA1YKL028W FPR4Q06205 392 aaPredicted RBP5.96□□□□□ -1.46
TFA1YKL028W TDA6Q06466 467 aa5.96□□□□□ -1.46
TFA1YKL028W URN1Q06525 465 aaKnown RBP5.96□□□□□ -1.46
TFA1YKL028W DAT1P13483 248 aaKnown RBP5.95□□□□□ -1.46
TFA1YKL028W CSE4P36012 229 aa5.95□□□□□ -1.46
TFA1YKL028W SIS2P36024 562 aa5.95□□□□□ -1.46
TFA1YKL028W HAL5P38970 855 aaKnown RBP5.95□□□□□ -1.46
TFA1YKL028W UTP7P40055 554 aaKnown RBP5.95□□□□□ -1.46
TFA1YKL028W YNL108CP53929 270 aa5.95□□□□□ -1.46
TFA1YKL028W SPT5P27692 1063 aaKnown RBP5.94□□□□□ -1.46
TFA1YKL028W SEC20P28791 383 aa5.94□□□□□ -1.46
TFA1YKL028W IPL1P38991 367 aa5.94□□□□□ -1.46
TFA1YKL028W SUP45P12385 437 aaKnown RBP5.92□□□□□ -1.46
TFA1YKL028W TBS1P38114 1094 aa5.92□□□□□ -1.46
TFA1YKL028W SKN7P38889 622 aa5.92□□□□□ -1.46
TFA1YKL028W NNF1P47149 201 aa5.92□□□□□ -1.46
TFA1YKL028W ALD2P47771 506 aa5.92□□□□□ -1.46
TFA1YKL028W ATG36P46983 293 aa5.91□□□□□ -1.46
TFA1YKL028W JJJ2P46997 583 aa5.91□□□□□ -1.46
TFA1YKL028W YRB30P53107 440 aaPredicted RBP5.91□□□□□ -1.46
TFA1YKL028W YAF9P53930 226 aa5.91□□□□□ -1.46
TFA1YKL028W NMD2P38798 1089 aaKnown RBP5.91□□□□□ -1.46
TFA1YKL028W ALD4P46367 519 aaKnown RBP5.91□□□□□ -1.46
TFA1YKL028W SUM1P46676 1062 aa5.91□□□□□ -1.46
TFA1YKL028W YNR014WP53719 212 aa5.91□□□□□ -1.46
TFA1YKL028W ENO1P00924 437 aaKnown RBP5.9□□□□□ -1.47
TFA1YKL028W NUG1P40010 520 aaKnown RBP5.9□□□□□ -1.47
TFA1YKL028W YMR187CQ03236 431 aa5.9□□□□□ -1.47
TFA1YKL028W SVF1Q05515 481 aa5.9□□□□□ -1.47
TFA1YKL028W MRX10Q05648 414 aa5.9□□□□□ -1.47
TFA1YKL028W RRP15Q06511 250 aaPredicted RBP5.9□□□□□ -1.47
TFA1YKL028W GPM1P00950 247 aaKnown RBP5.89□□□□□ -1.47
TFA1YKL028W YDJ1P25491 409 aaKnown RBP5.89□□□□□ -1.47
TFA1YKL028W SHM1P37292 490 aaPredicted RBP5.89□□□□□ -1.47
TFA1YKL028W MSC6Q08818 692 aaKnown RBP5.89□□□□□ -1.47
TFA1YKL028W YBL113CQ7M4S9 792 aa5.89□□□□□ -1.47
TFA1YKL028W TGL4P36165 910 aa5.88□□□□□ -1.47
TFA1YKL028W ALA1P40825 983 aaKnown RBP5.88□□□□□ -1.47
TFA1YKL028W RTS3P53289 263 aa5.88□□□□□ -1.47
TFA1YKL028W ENO2P00925 437 aaKnown RBP5.87□□□□□ -1.47
TFA1YKL028W MCX1P38323 520 aaPredicted RBP5.87□□□□□ -1.47
TFA1YKL028W SOH1P38633 127 aa5.87□□□□□ -1.47
TFA1YKL028W SBP1P10080 294 aaKnown RBP5.86□□□□□ -1.47
TFA1YKL028W FPS1P23900 669 aa5.86□□□□□ -1.47
TFA1YKL028W IRE1P32361 1115 aa5.86□□□□□ -1.47
TFA1YKL028W PSH1Q12161 406 aa5.86□□□□□ -1.47
TFA1YKL028W PDC6P26263 563 aaKnown RBP5.85□□□□□ -1.47
TFA1YKL028W ERP5P38819 212 aa5.85□□□□□ -1.47
TFA1YKL028W UTP13Q05946 817 aaKnown RBP5.85□□□□□ -1.47
TFA1YKL028W YCK2P23292 546 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms