RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C YBL113CQ7M4S9 792 aa4.04□□□□□ -1.76
CDH1YGL003C HEM3P28789 327 aa4.03□□□□□ -1.76
CDH1YGL003C UTR2P32623 467 aa4.03□□□□□ -1.76
CDH1YGL003C NTH2P35172 780 aa4.03□□□□□ -1.76
CDH1YGL003C TPS3P38426 1054 aaKnown RBP4.03□□□□□ -1.76
CDH1YGL003C XDJ1P39102 459 aa4.03□□□□□ -1.76
CDH1YGL003C APP1P53933 587 aa4.03□□□□□ -1.76
CDH1YGL003C ISU1Q03020 165 aa4.03□□□□□ -1.76
CDH1YGL003C PUN1Q06991 263 aa4.03□□□□□ -1.76
CDH1YGL003C RPS6AP0CX37 236 aaKnown RBP4.02□□□□□ -1.77
CDH1YGL003C RPS6BP0CX38 236 aaPredicted RBP4.02□□□□□ -1.77
CDH1YGL003C SEC20P28791 383 aa4.02□□□□□ -1.77
CDH1YGL003C TBS1P38114 1094 aa4.02□□□□□ -1.77
CDH1YGL003C SSN2P38931 1420 aa4.02□□□□□ -1.77
CDH1YGL003C RTT106P40161 455 aa4.02□□□□□ -1.77
CDH1YGL003C CYT1P07143 309 aa4.01□□□□□ -1.77
CDH1YGL003C ERP5P38819 212 aa4.01□□□□□ -1.77
CDH1YGL003C CWH41P53008 833 aa4.01□□□□□ -1.77
CDH1YGL003C ATG1P53104 897 aa4.01□□□□□ -1.77
CDH1YGL003C HED1Q03937 162 aa4.01□□□□□ -1.77
CDH1YGL003C STE6P12866 1290 aa4.01□□□□□ -1.77
CDH1YGL003C YBL086CP38177 466 aa4.01□□□□□ -1.77
CDH1YGL003C OSW7P43611 510 aa4.01□□□□□ -1.77
CDH1YGL003C ALD4P46367 519 aaKnown RBP4.01□□□□□ -1.77
CDH1YGL003C FUR4P05316 633 aaKnown RBP4□□□□□ -1.77
CDH1YGL003C SWI5P08153 709 aa4□□□□□ -1.77
CDH1YGL003C TRL1P09880 827 aaKnown RBP4□□□□□ -1.77
CDH1YGL003C DAT1P13483 248 aaKnown RBP4□□□□□ -1.77
CDH1YGL003C AMS1P22855 1083 aa4□□□□□ -1.77
CDH1YGL003C BRN1P38170 754 aa4□□□□□ -1.77
CDH1YGL003C BOL3P39724 118 aa4□□□□□ -1.77
CDH1YGL003C RTS3P53289 263 aa4□□□□□ -1.77
CDH1YGL003C DOS2P54858 310 aa4□□□□□ -1.77
CDH1YGL003C DFG5Q05031 458 aa4□□□□□ -1.77
CDH1YGL003C RRN6P32786 894 aa3.99□□□□□ -1.77
CDH1YGL003C NGR1P32831 672 aaKnown RBP3.99□□□□□ -1.77
CDH1YGL003C PAM1P37304 830 aaKnown RBP3.99□□□□□ -1.77
CDH1YGL003C BDS1Q08347 646 aa3.99□□□□□ -1.77
CDH1YGL003C MSC6Q08818 692 aaKnown RBP3.99□□□□□ -1.77
CDH1YGL003C WTM2Q12206 467 aa3.99□□□□□ -1.77
CDH1YGL003C LSO1Q3E827 93 aa3.99□□□□□ -1.77
CDH1YGL003C SUV3P32580 737 aa3.98□□□□□ -1.77
CDH1YGL003C GRS1P38088 690 aaKnown RBP3.98□□□□□ -1.77
CDH1YGL003C NAB3P38996 802 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
CDH1YGL003C MDJ2P42834 146 aa3.98□□□□□ -1.77
CDH1YGL003C ACF4P47129 309 aa3.98□□□□□ -1.77
CDH1YGL003C MCM1P11746 286 aa3.98□□□□□ -1.77
CDH1YGL003C ATG36P46983 293 aa3.98□□□□□ -1.77
CDH1YGL003C FAR11P53917 953 aa3.98□□□□□ -1.77
CDH1YGL003C YTA7P40340 1379 aa3.98□□□□□ -1.77
CDH1YGL003C TOA1P32773 286 aa3.97□□□□□ -1.77
CDH1YGL003C PPX1P38698 397 aa3.97□□□□□ -1.77
CDH1YGL003C YHL050CP38721 697 aa3.97□□□□□ -1.77
CDH1YGL003C YHR219WP38900 624 aa3.97□□□□□ -1.77
CDH1YGL003C IPL1P38991 367 aa3.97□□□□□ -1.77
CDH1YGL003C MET10P39692 1035 aa3.97□□□□□ -1.77
CDH1YGL003C GLO3P38682 493 aaKnown RBP3.96□□□□□ -1.78
CDH1YGL003C DLD3P39976 496 aaKnown RBP3.96□□□□□ -1.78
CDH1YGL003C QDR1P40475 563 aa3.96□□□□□ -1.78
CDH1YGL003C CWC22P53333 577 aaKnown RBP3.96□□□□□ -1.78
CDH1YGL003C HIF1Q12373 385 aa3.96□□□□□ -1.78
CDH1YGL003C SGS1P35187 1447 aa3.96□□□□□ -1.78
CDH1YGL003C TCB3Q03640 1545 aaKnown RBP3.96□□□□□ -1.78
CDH1YGL003C CDC4P07834 779 aa3.95□□□□□ -1.78
CDH1YGL003C YBR197CP38306 217 aa3.95□□□□□ -1.78
CDH1YGL003C SPR3P41901 512 aa3.95□□□□□ -1.78
CDH1YGL003C SUM1P46676 1062 aa3.95□□□□□ -1.78
CDH1YGL003C YPQ2Q06328 317 aa3.95□□□□□ -1.78
CDH1YGL003C ISC10P32645 267 aa3.95□□□□□ -1.78
CDH1YGL003C CAB1Q04430 367 aa3.95□□□□□ -1.78
CDH1YGL003C MET32Q12041 191 aa3.95□□□□□ -1.78
CDH1YGL003C SCD5P34758 872 aa3.94□□□□□ -1.78
CDH1YGL003C SPC42P36094 363 aa3.94□□□□□ -1.78
CDH1YGL003C TPO2P53283 614 aa3.94□□□□□ -1.78
CDH1YGL003C NUT2Q06213 157 aa3.94□□□□□ -1.78
CDH1YGL003C RLP24Q07915 199 aaKnown RBP3.94□□□□□ -1.78
CDH1YGL003C UGA3P26370 528 aa3.93□□□□□ -1.78
CDH1YGL003C BOI1P38041 980 aaKnown RBP3.93□□□□□ -1.78
CDH1YGL003C HXT5P38695 592 aa3.93□□□□□ -1.78
CDH1YGL003C UTP7P40055 554 aaKnown RBP3.93□□□□□ -1.78
CDH1YGL003C CLA4P48562 842 aa3.93□□□□□ -1.78
CDH1YGL003C MSB3P48566 633 aaPredicted RBP3.93□□□□□ -1.78
CDH1YGL003C FOX2Q02207 900 aaKnown RBP3.93□□□□□ -1.78
CDH1YGL003C APC11Q12157 165 aa3.93□□□□□ -1.78
CDH1YGL003C RAS1P01119 309 aa3.92□□□□□ -1.78
CDH1YGL003C ARG82P07250 355 aa3.92□□□□□ -1.78
CDH1YGL003C AFT1P22149 690 aa3.92□□□□□ -1.78
CDH1YGL003C HST3P53687 447 aa3.92□□□□□ -1.78
CDH1YGL003C UTP4Q06679 776 aaKnown RBP3.92□□□□□ -1.78
CDH1YGL003C MRPL33P20084 86 aa3.92□□□□□ -1.78
CDH1YGL003C YJR008WP47085 338 aa3.92□□□□□ -1.78
CDH1YGL003C UFD2P54860 961 aa3.92□□□□□ -1.78
CDH1YGL003C TRS120Q04183 1289 aa3.92□□□□□ -1.78
CDH1YGL003C FRT1Q99332 602 aa3.92□□□□□ -1.78
CDH1YGL003C RPS0AP32905 252 aaKnown RBP3.91□□□□□ -1.78
CDH1YGL003C ASH1P34233 588 aa3.91□□□□□ -1.78
CDH1YGL003C THI12P42883 340 aa3.91□□□□□ -1.78
CDH1YGL003C AAD14P42884 376 aa3.91□□□□□ -1.78
CDH1YGL003C THI5P43534 340 aa3.91□□□□□ -1.78
CDH1YGL003C POL32P47110 350 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms