RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C TY1A-PR1P0CX58 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-ORP0CX59 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-PR2P0CX60 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-DR5P0CX65 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-ER2P0CX66 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-GR3P0CX67 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-LR1P0CX68 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-MR2P0CX69 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-JR2P47099 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-DR1Q03856 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-ML1Q04706 440 aaKnown RBP5.59□□□□□ -1.51
SPB4YFL002C TY1A-BRQ12217 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-NL2Q12470 440 aa5.59□□□□□ -1.51
SPB4YFL002C TY1A-GR2Q12485 440 aa5.59□□□□□ -1.51
SPB4YFL002C SUV3P32580 737 aa5.58□□□□□ -1.52
SPB4YFL002C HAL5P38970 855 aaKnown RBP5.58□□□□□ -1.52
SPB4YFL002C AIM9P40053 627 aaKnown RBP5.58□□□□□ -1.52
SPB4YFL002C SDH2P21801 266 aa5.57□□□□□ -1.52
SPB4YFL002C IXR1P33417 597 aa5.57□□□□□ -1.52
SPB4YFL002C FYV10P40492 516 aa5.57□□□□□ -1.52
SPB4YFL002C SPR3P41901 512 aa5.57□□□□□ -1.52
SPB4YFL002C KXD1P53158 218 aa5.57□□□□□ -1.52
SPB4YFL002C SAS4Q04003 481 aa5.57□□□□□ -1.52
SPB4YFL002C TRS120Q04183 1289 aa5.57□□□□□ -1.52
SPB4YFL002C SPT2P06843 333 aaPredicted RBP5.56□□□□□ -1.52
SPB4YFL002C MIP1P15801 1254 aa5.56□□□□□ -1.52
SPB4YFL002C UBP1P25037 809 aa5.56□□□□□ -1.52
SPB4YFL002C VAC17P25591 423 aa5.56□□□□□ -1.52
SPB4YFL002C CWH41P53008 833 aa5.56□□□□□ -1.52
SPB4YFL002C ISR1Q06098 443 aaKnown RBP5.56□□□□□ -1.52
SPB4YFL002C NTH2P35172 780 aa5.55□□□□□ -1.52
SPB4YFL002C BOI1P38041 980 aaKnown RBP5.55□□□□□ -1.52
SPB4YFL002C PAC1P39946 494 aaKnown RBP5.55□□□□□ -1.52
SPB4YFL002C HXT10P43581 546 aa5.55□□□□□ -1.52
SPB4YFL002C RNH70P53331 553 aa5.55□□□□□ -1.52
SPB4YFL002C HDA3Q06623 655 aa5.55□□□□□ -1.52
SPB4YFL002C GPI13Q07830 1017 aa5.55□□□□□ -1.52
SPB4YFL002C PHO4P07270 312 aaKnown RBP5.55□□□□□ -1.52
SPB4YFL002C VAC8P39968 578 aa5.55□□□□□ -1.52
SPB4YFL002C ALD3P54114 506 aa5.55□□□□□ -1.52
SPB4YFL002C BUD20Q08004 166 aaPredicted RBP5.55□□□□□ -1.52
SPB4YFL002C NGR1P32831 672 aaKnown RBP5.53□□□□□ -1.52
SPB4YFL002C ALD6P54115 500 aaKnown RBP5.53□□□□□ -1.52
SPB4YFL002C VPS16Q03308 798 aa5.53□□□□□ -1.52
SPB4YFL002C RMD1Q03441 430 aa5.53□□□□□ -1.52
SPB4YFL002C PIN2Q12057 282 aa5.53□□□□□ -1.52
SPB4YFL002C MCM2P29469 868 aa5.53□□□□□ -1.52
SPB4YFL002C TPD3P31383 635 aa5.53□□□□□ -1.52
SPB4YFL002C RPT1P33299 467 aaKnown RBP5.53□□□□□ -1.52
SPB4YFL002C MAD1P40957 749 aa5.53□□□□□ -1.52
SPB4YFL002C CYT1P07143 309 aa5.52□□□□□ -1.53
SPB4YFL002C SRP40P32583 406 aaPredicted RBP5.52□□□□□ -1.53
SPB4YFL002C YBR197CP38306 217 aa5.52□□□□□ -1.53
SPB4YFL002C SPR28Q04921 423 aa5.52□□□□□ -1.53
SPB4YFL002C ATG20Q07528 640 aa5.52□□□□□ -1.53
SPB4YFL002C APC11Q12157 165 aa5.52□□□□□ -1.53
SPB4YFL002C RPS6AP0CX37 236 aaKnown RBP5.51□□□□□ -1.53
SPB4YFL002C RPS6BP0CX38 236 aaPredicted RBP5.51□□□□□ -1.53
SPB4YFL002C PAT1P25644 796 aaKnown RBP5.51□□□□□ -1.53
SPB4YFL002C DAK2P43550 591 aa5.51□□□□□ -1.53
SPB4YFL002C UFD2P54860 961 aa5.51□□□□□ -1.53
SPB4YFL002C TOP1P04786 769 aa5.51□□□□□ -1.53
SPB4YFL002C CLN2P20438 545 aa5.51□□□□□ -1.53
SPB4YFL002C MRF1P30775 413 aaPredicted RBP5.51□□□□□ -1.53
SPB4YFL002C RRN7P40992 514 aa5.51□□□□□ -1.53
SPB4YFL002C GCD6P32501 712 aaKnown RBP5.5□□□□□ -1.53
SPB4YFL002C PPG1P32838 368 aa5.5□□□□□ -1.53
SPB4YFL002C RRD1P40454 393 aaKnown RBP5.5□□□□□ -1.53
SPB4YFL002C IOC3P43596 787 aa5.5□□□□□ -1.53
SPB4YFL002C OSW7P43611 510 aa5.5□□□□□ -1.53
SPB4YFL002C PRT1P06103 763 aaKnown RBP5.49□□□□□ -1.53
SPB4YFL002C ISC10P32645 267 aa5.49□□□□□ -1.53
SPB4YFL002C YJL049WP47048 450 aa5.49□□□□□ -1.53
SPB4YFL002C SWI5P08153 709 aa5.48□□□□□ -1.53
SPB4YFL002C YKL091CP33324 310 aaKnown RBP5.48□□□□□ -1.53
SPB4YFL002C VPS35P34110 944 aa5.48□□□□□ -1.53
SPB4YFL002C RRP14P36080 434 aaKnown RBP5.48□□□□□ -1.53
SPB4YFL002C RTT106P40161 455 aa5.48□□□□□ -1.53
SPB4YFL002C CAB1Q04430 367 aa5.48□□□□□ -1.53
SPB4YFL002C WRS1Q12109 432 aaKnown RBP5.48□□□□□ -1.53
SPB4YFL002C SSF2Q12153 453 aaPredicted RBP5.48□□□□□ -1.53
SPB4YFL002C CIT2P08679 460 aa5.48□□□□□ -1.53
SPB4YFL002C PEP7P32609 515 aa5.48□□□□□ -1.53
SPB4YFL002C FPR3P38911 411 aaKnown RBP5.48□□□□□ -1.53
SPB4YFL002C RPS26AP39938 119 aaKnown RBP5.48□□□□□ -1.53
SPB4YFL002C RPS26BP39939 119 aaKnown RBP5.48□□□□□ -1.53
SPB4YFL002C NSE3Q05541 303 aa5.48□□□□□ -1.53
SPB4YFL002C RPB10P22139 70 aa5.47□□□□□ -1.53
SPB4YFL002C YNL011CP53980 444 aa5.47□□□□□ -1.53
SPB4YFL002C ESF1Q06344 628 aaKnown RBP5.47□□□□□ -1.53
SPB4YFL002C MOD5P07884 428 aa5.46□□□□□ -1.53
SPB4YFL002C MNR2P35724 969 aa5.46□□□□□ -1.53
SPB4YFL002C SAM37P50110 327 aa5.46□□□□□ -1.53
SPB4YFL002C CDC55Q00362 526 aa5.46□□□□□ -1.53
SPB4YFL002C FOX2Q02207 900 aaKnown RBP5.46□□□□□ -1.53
SPB4YFL002C RPN4Q03465 531 aa5.46□□□□□ -1.53
SPB4YFL002C STI1P15705 589 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
SPB4YFL002C YGR122WP53272 402 aa5.46□□□□□ -1.54
SPB4YFL002C ALG12P53730 551 aa5.46□□□□□ -1.54
SPB4YFL002C YPL062WQ02781 134 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms