RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C VPS24P36095 224 aaKnown RBP8.13□□□□□ -1.11
SHO1YER118C BOI1P38041 980 aaKnown RBP8.13□□□□□ -1.11
SHO1YER118C SPR3P41901 512 aa8.13□□□□□ -1.11
SHO1YER118C CWC24P53769 259 aa8.13□□□□□ -1.11
SHO1YER118C GYP5Q12344 894 aa8.13□□□□□ -1.11
SHO1YER118C NKP1Q12493 238 aa8.13□□□□□ -1.11
SHO1YER118C MPH3P0CE00 602 aa8.12□□□□□ -1.11
SHO1YER118C RPS26AP39938 119 aaKnown RBP8.12□□□□□ -1.11
SHO1YER118C RPS26BP39939 119 aaKnown RBP8.12□□□□□ -1.11
SHO1YER118C DAK2P43550 591 aa8.12□□□□□ -1.11
SHO1YER118C ITC1P53125 1264 aa8.12□□□□□ -1.11
SHO1YER118C PUS6P53294 404 aa8.12□□□□□ -1.11
SHO1YER118C GIR2Q03768 265 aaPredicted RBP8.12□□□□□ -1.11
SHO1YER118C AI4P03878 556 aa8.11□□□□□ -1.11
SHO1YER118C RAD2P07276 1031 aa8.11□□□□□ -1.11
SHO1YER118C VAN1P23642 535 aa8.11□□□□□ -1.11
SHO1YER118C GRX1P25373 110 aaKnown RBP8.11□□□□□ -1.11
SHO1YER118C PET112P33893 541 aa8.11□□□□□ -1.11
SHO1YER118C MPE1P35728 441 aaKnown RBP8.11□□□□□ -1.11
SHO1YER118C FUI1P38196 639 aa8.11□□□□□ -1.11
SHO1YER118C KRI1P42846 591 aaKnown RBP8.11□□□□□ -1.11
SHO1YER118C PHO8P11491 566 aa8.1□□□□□ -1.11
SHO1YER118C MRC1P25588 1096 aa8.1□□□□□ -1.11
SHO1YER118C CRP1P38845 465 aaKnown RBP8.1□□□□□ -1.11
SHO1YER118C UTP13Q05946 817 aaKnown RBP8.1□□□□□ -1.11
SHO1YER118C TSC13Q99190 310 aa8.1□□□□□ -1.11
SHO1YER118C TRS33Q99394 268 aa8.1□□□□□ -1.11
SHO1YER118C SRM1P21827 482 aa8.09□□□□□ -1.11
SHO1YER118C TIM23P32897 222 aa8.09□□□□□ -1.11
SHO1YER118C VPS27P40343 622 aaKnown RBP8.09□□□□□ -1.11
SHO1YER118C FRA1Q07825 749 aa8.09□□□□□ -1.11
SHO1YER118C THS1P04801 734 aaKnown RBP8.08□□□□□ -1.12
SHO1YER118C GCD6P32501 712 aaKnown RBP8.08□□□□□ -1.12
SHO1YER118C TOA1P32773 286 aa8.08□□□□□ -1.12
SHO1YER118C SLI15P38283 698 aa8.08□□□□□ -1.12
SHO1YER118C PAF1P38351 445 aa8.08□□□□□ -1.12
SHO1YER118C SOH1P38633 127 aa8.08□□□□□ -1.12
SHO1YER118C NOC2P39744 710 aaKnown RBP8.08□□□□□ -1.12
SHO1YER118C PEX21P50091 288 aa8.08□□□□□ -1.12
SHO1YER118C COG4Q06096 861 aa8.08□□□□□ -1.12
SHO1YER118C TUM1Q08686 304 aaKnown RBP8.08□□□□□ -1.12
SHO1YER118C YLR125WQ12138 136 aa8.08□□□□□ -1.12
SHO1YER118C CYC8P14922 966 aa8.07□□□□□ -1.12
SHO1YER118C TRX2P22803 104 aaKnown RBP8.07□□□□□ -1.12
SHO1YER118C ISW1P38144 1129 aa8.07□□□□□ -1.12
SHO1YER118C RPT2P40327 437 aaKnown RBP8.07□□□□□ -1.12
SHO1YER118C APL6P46682 809 aa8.07□□□□□ -1.12
SHO1YER118C YGR122WP53272 402 aa8.07□□□□□ -1.12
SHO1YER118C STE20Q03497 939 aaKnown RBP8.07□□□□□ -1.12
SHO1YER118C RAD4P14736 754 aa8.06□□□□□ -1.12
SHO1YER118C PDI1P17967 522 aaKnown RBP8.06□□□□□ -1.12
SHO1YER118C RAD27P26793 382 aa8.06□□□□□ -1.12
SHO1YER118C DPB3P27344 201 aa8.06□□□□□ -1.12
SHO1YER118C SUV3P32580 737 aa8.06□□□□□ -1.12
SHO1YER118C MFT1P33441 392 aaKnown RBP8.06□□□□□ -1.12
SHO1YER118C FOL1P53848 824 aa8.06□□□□□ -1.12
SHO1YER118C CDC73Q06697 393 aa8.06□□□□□ -1.12
SHO1YER118C POL5P39985 1022 aaKnown RBP8.05□□□□□ -1.12
SHO1YER118C CHZ1P40019 153 aaPredicted RBP8.05□□□□□ -1.12
SHO1YER118C TBF1Q02457 562 aa8.05□□□□□ -1.12
SHO1YER118C NAN1Q02931 896 aaKnown RBP8.05□□□□□ -1.12
SHO1YER118C SVL3Q03088 825 aaKnown RBP8.05□□□□□ -1.12
SHO1YER118C VMS1Q04311 632 aaKnown RBP8.05□□□□□ -1.12
SHO1YER118C TEC1P18412 486 aa8.04□□□□□ -1.12
SHO1YER118C BUD31P25337 157 aaPredicted RBP8.04□□□□□ -1.12
SHO1YER118C GUT2P32191 649 aa8.04□□□□□ -1.12
SHO1YER118C VPS35P34110 944 aa8.04□□□□□ -1.12
SHO1YER118C TIM54P47045 478 aa8.04□□□□□ -1.12
SHO1YER118C PEX8P53248 589 aa8.04□□□□□ -1.12
SHO1YER118C NOP14Q99207 810 aaKnown RBP8.04□□□□□ -1.12
SHO1YER118C THI4P32318 326 aa8.03□□□□□ -1.12
SHO1YER118C DCW1P36091 449 aa8.03□□□□□ -1.12
SHO1YER118C TUB4P53378 473 aa8.02□□□□□ -1.13
SHO1YER118C UFD2P54860 961 aa8.02□□□□□ -1.13
SHO1YER118C FOX2Q02207 900 aaKnown RBP8.02□□□□□ -1.13
SHO1YER118C TDA5Q06417 326 aaKnown RBP8.02□□□□□ -1.13
SHO1YER118C YPR084WQ06821 456 aa8.02□□□□□ -1.13
SHO1YER118C YNR029CP53729 429 aaKnown RBP8.01□□□□□ -1.13
SHO1YER118C GDE1Q02979 1223 aa8.01□□□□□ -1.13
SHO1YER118C SPO20Q04359 397 aa8.01□□□□□ -1.13
SHO1YER118C YOR378WQ08902 515 aa8.01□□□□□ -1.13
SHO1YER118C YRR1Q12172 810 aa8.01□□□□□ -1.13
SHO1YER118C YHR020WP38708 688 aaKnown RBP8□□□□□ -1.13
SHO1YER118C UBP9P39967 754 aa8□□□□□ -1.13
SHO1YER118C SPF1P39986 1215 aaKnown RBP8□□□□□ -1.13
SHO1YER118C ESF2P53743 316 aaKnown RBP8□□□□□ -1.13
SHO1YER118C ENT2Q05785 613 aa8□□□□□ -1.13
SHO1YER118C HIF1Q12373 385 aa8□□□□□ -1.13
SHO1YER118C DPS1P04802 557 aaKnown RBP7.99□□□□□ -1.13
SHO1YER118C FIG4P42837 879 aa7.99□□□□□ -1.13
SHO1YER118C YFL034WP43564 1073 aa7.99□□□□□ -1.13
SHO1YER118C FAA4P47912 694 aaKnown RBP7.99□□□□□ -1.13
SHO1YER118C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
SHO1YER118C OXR1Q08952 273 aa7.99□□□□□ -1.13
SHO1YER118C KEX2P13134 814 aa7.98□□□□□ -1.13
SHO1YER118C PRI2P20457 528 aa7.98□□□□□ -1.13
SHO1YER118C UBP1P25037 809 aa7.98□□□□□ -1.13
SHO1YER118C RPN12P32496 274 aa7.98□□□□□ -1.13
SHO1YER118C SNF7P39929 240 aaKnown RBP7.98□□□□□ -1.13
SHO1YER118C SAM37P50110 327 aa7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 108.3 ms