RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C UBP15P50101 1230 aa6.85□□□□□ -1.31
SPR28YDR218C UTP13Q05946 817 aaKnown RBP6.85□□□□□ -1.31
SPR28YDR218C MDJ1P35191 511 aa6.83□□□□□ -1.32
SPR28YDR218C SUM1P46676 1062 aa6.83□□□□□ -1.32
SPR28YDR218C YJL007CP47080 104 aa6.83□□□□□ -1.32
SPR28YDR218C HGH1P48362 394 aaKnown RBP6.83□□□□□ -1.32
SPR28YDR218C SHM1P37292 490 aaPredicted RBP6.82□□□□□ -1.32
SPR28YDR218C TBS1P38114 1094 aa6.82□□□□□ -1.32
SPR28YDR218C MTC5Q03897 1148 aa6.82□□□□□ -1.32
SPR28YDR218C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
SPR28YDR218C DIT1P21623 536 aa6.81□□□□□ -1.32
SPR28YDR218C ATG3P40344 310 aa6.81□□□□□ -1.32
SPR28YDR218C JJJ2P46997 583 aa6.81□□□□□ -1.32
SPR28YDR218C AHP1P38013 176 aaKnown RBP6.8□□□□□ -1.32
SPR28YDR218C CEM1P39525 442 aa6.8□□□□□ -1.32
SPR28YDR218C ATG32P40458 529 aa6.8□□□□□ -1.32
SPR28YDR218C SYT1Q06836 1226 aa6.8□□□□□ -1.32
SPR28YDR218C YFL066CP43538 392 aa6.79□□□□□ -1.32
SPR28YDR218C MRX10Q05648 414 aa6.79□□□□□ -1.32
SPR28YDR218C BIM1P40013 344 aa6.78□□□□□ -1.32
SPR28YDR218C ICP55P40051 511 aa6.78□□□□□ -1.32
SPR28YDR218C YMR265CQ03508 461 aaKnown RBP6.78□□□□□ -1.32
SPR28YDR218C YPQ2Q06328 317 aa6.78□□□□□ -1.32
SPR28YDR218C ENO1P00924 437 aaKnown RBP6.77□□□□□ -1.33
SPR28YDR218C SWI5P08153 709 aa6.76□□□□□ -1.33
SPR28YDR218C TIF1P10081 395 aaKnown RBP6.76□□□□□ -1.33
SPR28YDR218C IRE1P32361 1115 aa6.76□□□□□ -1.33
SPR28YDR218C AIM9P40053 627 aaKnown RBP6.76□□□□□ -1.33
SPR28YDR218C ALA1P40825 983 aaKnown RBP6.76□□□□□ -1.33
SPR28YDR218C KRE33P53914 1056 aaKnown RBP6.76□□□□□ -1.33
SPR28YDR218C PSH1Q12161 406 aa6.75□□□□□ -1.33
SPR28YDR218C YDR461C-AQ2V2P7 80 aa6.75□□□□□ -1.33
SPR28YDR218C RPS31P05759 152 aaKnown RBP6.74□□□□□ -1.33
SPR28YDR218C NSG2P53898 299 aa6.74□□□□□ -1.33
SPR28YDR218C ADE12P80210 433 aaKnown RBP6.74□□□□□ -1.33
SPR28YDR218C PHM7Q12252 991 aa6.74□□□□□ -1.33
SPR28YDR218C PDC6P26263 563 aaKnown RBP6.73□□□□□ -1.33
SPR28YDR218C PUS1Q12211 544 aaKnown RBP6.73□□□□□ -1.33
SPR28YDR218C AI1P03875 834 aa6.72□□□□□ -1.33
SPR28YDR218C THI72Q08579 599 aa6.72□□□□□ -1.33
SPR28YDR218C RPS6AP0CX37 236 aaKnown RBP6.71□□□□□ -1.34
SPR28YDR218C RPS6BP0CX38 236 aaPredicted RBP6.71□□□□□ -1.34
SPR28YDR218C PEP12P32854 288 aa6.71□□□□□ -1.34
SPR28YDR218C YNL165WP53891 406 aa6.71□□□□□ -1.34
SPR28YDR218C RTG2P32608 588 aaKnown RBP6.7□□□□□ -1.34
SPR28YDR218C SBE2P42223 864 aaKnown RBP6.7□□□□□ -1.34
SPR28YDR218C IOC4Q04213 475 aa6.7□□□□□ -1.34
SPR28YDR218C LSB3P43603 459 aaKnown RBP6.69□□□□□ -1.34
SPR28YDR218C PDI1P17967 522 aaKnown RBP6.68□□□□□ -1.34
SPR28YDR218C NTH2P35172 780 aa6.68□□□□□ -1.34
SPR28YDR218C MRPL16P38064 232 aa6.68□□□□□ -1.34
SPR28YDR218C ALD2P47771 506 aa6.68□□□□□ -1.34
SPR28YDR218C STB3Q12427 513 aa6.67□□□□□ -1.34
SPR28YDR218C GPM1P00950 247 aaKnown RBP6.65□□□□□ -1.34
SPR28YDR218C MCM1P11746 286 aa6.65□□□□□ -1.34
SPR28YDR218C YFL034WP43564 1073 aa6.65□□□□□ -1.34
SPR28YDR218C YML020WQ03722 664 aa6.65□□□□□ -1.34
SPR28YDR218C LEU1P07264 779 aaKnown RBP6.64□□□□□ -1.35
SPR28YDR218C FPS1P23900 669 aa6.64□□□□□ -1.35
SPR28YDR218C RPL34BP40525 121 aaKnown RBP6.64□□□□□ -1.35
SPR28YDR218C SPR3P41901 512 aa6.64□□□□□ -1.35
SPR28YDR218C TDA6Q06466 467 aa6.64□□□□□ -1.35
SPR28YDR218C TSC13Q99190 310 aa6.64□□□□□ -1.35
SPR28YDR218C ORC1P54784 914 aaPredicted RBP6.63□□□□□ -1.35
SPR28YDR218C MLF3P32047 452 aa6.62□□□□□ -1.35
SPR28YDR218C KTR7P40504 517 aa6.62□□□□□ -1.35
SPR28YDR218C CCT8P47079 568 aaKnown RBP6.62□□□□□ -1.35
SPR28YDR218C ACS2P52910 683 aaKnown RBP6.62□□□□□ -1.35
SPR28YDR218C CYT1P07143 309 aa6.61□□□□□ -1.35
SPR28YDR218C MSC7P38694 644 aa6.61□□□□□ -1.35
SPR28YDR218C NOP7P53261 605 aaKnown RBP6.61□□□□□ -1.35
SPR28YDR218C YPR053CQ6Q5F3 151 aa6.61□□□□□ -1.35
SPR28YDR218C TY1A-DR2Q03964 440 aaKnown RBP6.6□□□□□ -1.35
SPR28YDR218C PDC5P16467 563 aaKnown RBP6.58□□□□□ -1.36
SPR28YDR218C RGP1P16664 663 aa6.58□□□□□ -1.36
SPR28YDR218C PHO87P25360 923 aa6.58□□□□□ -1.36
SPR28YDR218C Q0182Q9ZZW1 134 aa6.58□□□□□ -1.36
SPR28YDR218C SKN7P38889 622 aa6.57□□□□□ -1.36
SPR28YDR218C YNR014WP53719 212 aa6.57□□□□□ -1.36
SPR28YDR218C YCK2P23292 546 aaKnown RBP6.56□□□□□ -1.36
SPR28YDR218C UBP1P25037 809 aa6.56□□□□□ -1.36
SPR28YDR218C KNS1P32350 737 aaPredicted RBP6.56□□□□□ -1.36
SPR28YDR218C MCX1P38323 520 aaPredicted RBP6.55□□□□□ -1.36
SPR28YDR218C YTA6P40328 754 aa6.55□□□□□ -1.36
SPR28YDR218C ROM1P53046 1155 aa6.55□□□□□ -1.36
SPR28YDR218C YMR187CQ03236 431 aa6.55□□□□□ -1.36
SPR28YDR218C NOP8Q08287 484 aaPredicted RBP6.55□□□□□ -1.36
SPR28YDR218C SSA1P10591 642 aaKnown RBP6.54□□□□□ -1.36
SPR28YDR218C HXT5P38695 592 aa6.54□□□□□ -1.36
SPR28YDR218C GAS4Q08271 471 aa6.54□□□□□ -1.36
SPR28YDR218C GEF1P37020 779 aa6.53□□□□□ -1.36
SPR28YDR218C BOI2P39969 1040 aa6.53□□□□□ -1.36
SPR28YDR218C YDR215CQ12240 137 aa6.53□□□□□ -1.36
SPR28YDR218C HAP4P14064 554 aa6.52□□□□□ -1.37
SPR28YDR218C GAL2P13181 574 aa6.51□□□□□ -1.37
SPR28YDR218C SLN1P39928 1220 aaPredicted RBP6.51□□□□□ -1.37
SPR28YDR218C MTO1P53070 669 aa6.51□□□□□ -1.37
SPR28YDR218C NGR1P32831 672 aaKnown RBP6.5□□□□□ -1.37
SPR28YDR218C TTI1P36097 1038 aa6.5□□□□□ -1.37
SPR28YDR218C UTP4Q06679 776 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms