RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR048C	YDR048C	DAL1	P32375	460 aa		4.32	□□□□□ -1.72
YDR048C	YDR048C	SPT2	P06843	333 aa	Predicted RBP	4.31	□□□□□ -1.72
YDR048C	YDR048C	TAT1	P38085	619 aa		4.31	□□□□□ -1.72
YDR048C	YDR048C	RPP2B	P02400	110 aa	Known RBP	4.3	□□□□□ -1.72
YDR048C	YDR048C	MCM16	Q12262	181 aa		4.3	□□□□□ -1.72
YDR048C	YDR048C	BOI2	P39969	1040 aa		4.29	□□□□□ -1.72
YDR048C	YDR048C	MSN5	P52918	1224 aa		4.28	□□□□□ -1.72
YDR048C	YDR048C	WTM2	Q12206	467 aa		4.28	□□□□□ -1.72
YDR048C	YDR048C	YBL036C	P38197	257 aa		4.27	□□□□□ -1.73
YDR048C	YDR048C	DLD3	P39976	496 aa	Known RBP	4.27	□□□□□ -1.73
YDR048C	YDR048C	EMP47	P43555	445 aa		4.27	□□□□□ -1.73
YDR048C	YDR048C	UTP13	Q05946	817 aa	Known RBP	4.27	□□□□□ -1.73
YDR048C	YDR048C	SLA1	P32790	1244 aa		4.26	□□□□□ -1.73
YDR048C	YDR048C	BRL1	P38770	471 aa		4.26	□□□□□ -1.73
YDR048C	YDR048C	SSN3	P39073	555 aa		4.26	□□□□□ -1.73
YDR048C	YDR048C	DIT1	P21623	536 aa		4.25	□□□□□ -1.73
YDR048C	YDR048C	HAL5	P38970	855 aa	Known RBP	4.25	□□□□□ -1.73
YDR048C	YDR048C	UBP15	P50101	1230 aa		4.25	□□□□□ -1.73
YDR048C	YDR048C	TFB3	Q03290	321 aa		4.25	□□□□□ -1.73
YDR048C	YDR048C	YMR265C	Q03508	461 aa	Known RBP	4.25	□□□□□ -1.73
YDR048C	YDR048C	ISR1	Q06098	443 aa	Known RBP	4.25	□□□□□ -1.73
YDR048C	YDR048C	SUP45	P12385	437 aa	Known RBP	4.24	□□□□□ -1.73
YDR048C	YDR048C	YDJ1	P25491	409 aa	Known RBP	4.24	□□□□□ -1.73
YDR048C	YDR048C	ISF1	P32488	338 aa		4.24	□□□□□ -1.73
YDR048C	YDR048C	UTR2	P32623	467 aa		4.24	□□□□□ -1.73
YDR048C	YDR048C	YPP1	P46951	817 aa		4.24	□□□□□ -1.73
YDR048C	YDR048C	AOS1	Q06624	347 aa		4.24	□□□□□ -1.73
YDR048C	YDR048C	TY1A-DR3	Q12441	440 aa		4.24	□□□□□ -1.73
YDR048C	YDR048C	YDR461C-A	Q2V2P7	80 aa		4.24	□□□□□ -1.73
YDR048C	YDR048C	ATG3	P40344	310 aa		4.23	□□□□□ -1.73
YDR048C	YDR048C	PKC1	P24583	1151 aa		4.22	□□□□□ -1.73
YDR048C	YDR048C	BIO2	P32451	375 aa		4.22	□□□□□ -1.73
YDR048C	YDR048C	TBS1	P38114	1094 aa		4.22	□□□□□ -1.73
YDR048C	YDR048C	KRE33	P53914	1056 aa	Known RBP	4.22	□□□□□ -1.73
YDR048C	YDR048C	DAT1	P13483	248 aa	Known RBP	4.21	□□□□□ -1.74
YDR048C	YDR048C	SLX8	P40072	274 aa		4.21	□□□□□ -1.74
YDR048C	YDR048C	SUM1	P46676	1062 aa		4.21	□□□□□ -1.74
YDR048C	YDR048C	GPM1	P00950	247 aa	Known RBP	4.2	□□□□□ -1.74
YDR048C	YDR048C	SOH1	P38633	127 aa		4.2	□□□□□ -1.74
YDR048C	YDR048C	ENO2	P00925	437 aa	Known RBP	4.19	□□□□□ -1.74
YDR048C	YDR048C	AHP1	P38013	176 aa	Known RBP	4.19	□□□□□ -1.74
YDR048C	YDR048C	PRY1	P47032	299 aa		4.19	□□□□□ -1.74
YDR048C	YDR048C	RIM21	P48565	533 aa		4.19	□□□□□ -1.74
YDR048C	YDR048C	HDA3	Q06623	655 aa		4.19	□□□□□ -1.74
YDR048C	YDR048C	JJJ2	P46997	583 aa		4.18	□□□□□ -1.74
YDR048C	YDR048C	RDS2	P19541	446 aa	Known RBP	4.17	□□□□□ -1.74
YDR048C	YDR048C	IRE1	P32361	1115 aa		4.17	□□□□□ -1.74
YDR048C	YDR048C	SHM1	P37292	490 aa	Predicted RBP	4.17	□□□□□ -1.74
YDR048C	YDR048C	UTP7	P40055	554 aa	Known RBP	4.17	□□□□□ -1.74
YDR048C	YDR048C	YPQ2	Q06328	317 aa		4.17	□□□□□ -1.74
YDR048C	YDR048C	YNL108C	P53929	270 aa		4.16	□□□□□ -1.74
YDR048C	YDR048C	ELM1	P32801	640 aa		4.15	□□□□□ -1.75
YDR048C	YDR048C	MRX10	Q05648	414 aa		4.15	□□□□□ -1.75
YDR048C	YDR048C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
YDR048C	YDR048C	RPS31	P05759	152 aa	Known RBP	4.14	□□□□□ -1.75
YDR048C	YDR048C	SWI5	P08153	709 aa		4.14	□□□□□ -1.75
YDR048C	YDR048C	MET1	P36150	593 aa		4.14	□□□□□ -1.75
YDR048C	YDR048C	ALA1	P40825	983 aa	Known RBP	4.14	□□□□□ -1.75
YDR048C	YDR048C	PSH1	Q12161	406 aa		4.14	□□□□□ -1.75
YDR048C	YDR048C	MCM1	P11746	286 aa		4.13	□□□□□ -1.75
YDR048C	YDR048C	PDC6	P26263	563 aa	Known RBP	4.13	□□□□□ -1.75
YDR048C	YDR048C	LEU1	P07264	779 aa	Known RBP	4.12	□□□□□ -1.75
YDR048C	YDR048C	AIM9	P40053	627 aa	Known RBP	4.12	□□□□□ -1.75
YDR048C	YDR048C	YFL034W	P43564	1073 aa		4.12	□□□□□ -1.75
YDR048C	YDR048C	RPS6A	P0CX37	236 aa	Known RBP	4.11	□□□□□ -1.75
YDR048C	YDR048C	RPS6B	P0CX38	236 aa	Predicted RBP	4.11	□□□□□ -1.75
YDR048C	YDR048C	MRPL16	P38064	232 aa		4.11	□□□□□ -1.75
YDR048C	YDR048C	YJL007C	P47080	104 aa		4.11	□□□□□ -1.75
YDR048C	YDR048C	FPS1	P23900	669 aa		4.1	□□□□□ -1.75
YDR048C	YDR048C	PEP12	P32854	288 aa		4.1	□□□□□ -1.75
YDR048C	YDR048C	BIM1	P40013	344 aa		4.1	□□□□□ -1.75
YDR048C	YDR048C	SPR3	P41901	512 aa		4.1	□□□□□ -1.75
YDR048C	YDR048C	ENO1	P00924	437 aa	Known RBP	4.09	□□□□□ -1.75
YDR048C	YDR048C	KNS1	P32350	737 aa	Predicted RBP	4.09	□□□□□ -1.75
YDR048C	YDR048C	ATG32	P40458	529 aa		4.09	□□□□□ -1.75
YDR048C	YDR048C	ALD2	P47771	506 aa		4.09	□□□□□ -1.75
YDR048C	YDR048C	STB3	Q12427	513 aa		4.09	□□□□□ -1.75
YDR048C	YDR048C	TIF1	P10081	395 aa	Known RBP	4.08	□□□□□ -1.76
YDR048C	YDR048C	NTH2	P35172	780 aa		4.08	□□□□□ -1.76
YDR048C	YDR048C	TY1A-DR2	Q03964	440 aa	Known RBP	4.08	□□□□□ -1.76
YDR048C	YDR048C	TSC13	Q99190	310 aa		4.08	□□□□□ -1.76
YDR048C	YDR048C	RPP1A	P05318	106 aa	Predicted RBP	4.07	□□□□□ -1.76
YDR048C	YDR048C	PDC5	P16467	563 aa	Known RBP	4.07	□□□□□ -1.76
YDR048C	YDR048C	RGP1	P16664	663 aa		4.07	□□□□□ -1.76
YDR048C	YDR048C	MSC7	P38694	644 aa		4.07	□□□□□ -1.76
YDR048C	YDR048C	HGH1	P48362	394 aa	Known RBP	4.07	□□□□□ -1.76
YDR048C	YDR048C	YNL165W	P53891	406 aa		4.07	□□□□□ -1.76
YDR048C	YDR048C	PDI1	P17967	522 aa	Known RBP	4.05	□□□□□ -1.76
YDR048C	YDR048C	RTG2	P32608	588 aa	Known RBP	4.05	□□□□□ -1.76
YDR048C	YDR048C	UBP5	P39944	805 aa		4.05	□□□□□ -1.76
YDR048C	YDR048C	CYT1	P07143	309 aa		4.04	□□□□□ -1.76
YDR048C	YDR048C	UBP1	P25037	809 aa		4.04	□□□□□ -1.76
YDR048C	YDR048C	MLF3	P32047	452 aa		4.04	□□□□□ -1.76
YDR048C	YDR048C	YTA6	P40328	754 aa		4.04	□□□□□ -1.76
YDR048C	YDR048C	RPL34B	P40525	121 aa	Known RBP	4.04	□□□□□ -1.76
YDR048C	YDR048C	UTP4	Q06679	776 aa	Known RBP	4.04	□□□□□ -1.76
YDR048C	YDR048C	PHO87	P25360	923 aa		4.03	□□□□□ -1.76
YDR048C	YDR048C	SKP1	P52286	194 aa		4.03	□□□□□ -1.76
YDR048C	YDR048C	HEH2	Q03281	663 aa		4.03	□□□□□ -1.76
YDR048C	YDR048C	Q0182	Q9ZZW1	134 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms