RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	ALD4	P46367	519 aa	Known RBP	8.17	□□□□□ -1.1
RPN5	YDL147W	ACF4	P47129	309 aa		8.17	□□□□□ -1.1
RPN5	YDL147W	SDH2	P21801	266 aa		8.16	□□□□□ -1.1
RPN5	YDL147W	PPX1	P38698	397 aa		8.16	□□□□□ -1.1
RPN5	YDL147W	QDR1	P40475	563 aa		8.16	□□□□□ -1.1
RPN5	YDL147W	SYH1	Q02875	849 aa	Known RBP	8.16	□□□□□ -1.1
RPN5	YDL147W	CYT1	P07143	309 aa		8.15	□□□□□ -1.1
RPN5	YDL147W	POL32	P47110	350 aa		8.15	□□□□□ -1.1
RPN5	YDL147W	RPS6A	P0CX37	236 aa	Known RBP	8.14	□□□□□ -1.11
RPN5	YDL147W	RPS6B	P0CX38	236 aa	Predicted RBP	8.14	□□□□□ -1.11
RPN5	YDL147W	EMW1	P42842	904 aa	Known RBP	8.14	□□□□□ -1.11
RPN5	YDL147W	APP1	P53933	587 aa		8.14	□□□□□ -1.11
RPN5	YDL147W	DAT1	P13483	248 aa	Known RBP	8.13	□□□□□ -1.11
RPN5	YDL147W	TBS1	P38114	1094 aa		8.13	□□□□□ -1.11
RPN5	YDL147W	RPP2B	P02400	110 aa	Known RBP	8.12	□□□□□ -1.11
RPN5	YDL147W	UBP1	P25037	809 aa		8.12	□□□□□ -1.11
RPN5	YDL147W	UTR2	P32623	467 aa		8.12	□□□□□ -1.11
RPN5	YDL147W	ISU1	Q03020	165 aa		8.12	□□□□□ -1.11
RPN5	YDL147W	PUS5	Q06244	254 aa		8.12	□□□□□ -1.11
RPN5	YDL147W	SWI5	P08153	709 aa		8.11	□□□□□ -1.11
RPN5	YDL147W	ALD2	P47771	506 aa		8.11	□□□□□ -1.11
RPN5	YDL147W	SPT2	P06843	333 aa	Predicted RBP	8.1	□□□□□ -1.11
RPN5	YDL147W	NGR1	P32831	672 aa	Known RBP	8.1	□□□□□ -1.11
RPN5	YDL147W	MGE1	P38523	228 aa		8.1	□□□□□ -1.11
RPN5	YDL147W	LSO1	Q3E827	93 aa		8.1	□□□□□ -1.11
RPN5	YDL147W	FBP26	P32604	452 aa		8.09	□□□□□ -1.11
RPN5	YDL147W	MKS1	P34072	584 aa		8.09	□□□□□ -1.11
RPN5	YDL147W	BDP1	P46678	594 aa		8.09	□□□□□ -1.11
RPN5	YDL147W	NUT2	Q06213	157 aa		8.09	□□□□□ -1.11
RPN5	YDL147W	SUV3	P32580	737 aa		8.08	□□□□□ -1.12
RPN5	YDL147W	SPR3	P41901	512 aa		8.08	□□□□□ -1.12
RPN5	YDL147W	FRK1	Q03002	865 aa	Predicted RBP	8.07	□□□□□ -1.12
RPN5	YDL147W	WHI5	Q12416	295 aa		8.07	□□□□□ -1.12
RPN5	YDL147W	ATE1	P16639	503 aa		8.06	□□□□□ -1.12
RPN5	YDL147W	SVF1	Q05515	481 aa		8.06	□□□□□ -1.12
RPN5	YDL147W	RRP15	Q06511	250 aa	Predicted RBP	8.05	□□□□□ -1.12
RPN5	YDL147W	YBR197C	P38306	217 aa		8.04	□□□□□ -1.12
RPN5	YDL147W	FRT1	Q99332	602 aa		8.04	□□□□□ -1.12
RPN5	YDL147W	ISC10	P32645	267 aa		8.03	□□□□□ -1.12
RPN5	YDL147W	SEC8	P32855	1065 aa		8.03	□□□□□ -1.12
RPN5	YDL147W	FOX2	Q02207	900 aa	Known RBP	8.03	□□□□□ -1.12
RPN5	YDL147W	OYE2	Q03558	400 aa	Known RBP	8.03	□□□□□ -1.12
RPN5	YDL147W	BDS1	Q08347	646 aa		8.03	□□□□□ -1.12
RPN5	YDL147W	STE6	P12866	1290 aa		8.03	□□□□□ -1.12
RPN5	YDL147W	ORC1	P54784	914 aa	Predicted RBP	8.03	□□□□□ -1.12
RPN5	YDL147W	TRS120	Q04183	1289 aa		8.03	□□□□□ -1.12
RPN5	YDL147W	WTM2	Q12206	467 aa		8.03	□□□□□ -1.12
RPN5	YDL147W	DFG5	Q05031	458 aa		8.02	□□□□□ -1.13
RPN5	YDL147W	MRT4	P33201	236 aa	Known RBP	8.01	□□□□□ -1.13
RPN5	YDL147W	BOI1	P38041	980 aa	Known RBP	8.01	□□□□□ -1.13
RPN5	YDL147W	DLD3	P39976	496 aa	Known RBP	8.01	□□□□□ -1.13
RPN5	YDL147W	MET4	P32389	672 aa		8	□□□□□ -1.13
RPN5	YDL147W	UFD2	P54860	961 aa		8	□□□□□ -1.13
RPN5	YDL147W	NAP1	P25293	417 aa	Known RBP	7.99	□□□□□ -1.13
RPN5	YDL147W	YBL086C	P38177	466 aa		7.99	□□□□□ -1.13
RPN5	YDL147W	CST6	P40535	587 aa		7.99	□□□□□ -1.13
RPN5	YDL147W	CAB1	Q04430	367 aa		7.99	□□□□□ -1.13
RPN5	YDL147W	MCM1	P11746	286 aa		7.97	□□□□□ -1.13
RPN5	YDL147W	UTP7	P40055	554 aa	Known RBP	7.97	□□□□□ -1.13
RPN5	YDL147W	RTT106	P40161	455 aa		7.97	□□□□□ -1.13
RPN5	YDL147W	YJR107W	P47145	328 aa		7.97	□□□□□ -1.13
RPN5	YDL147W	YPL062W	Q02781	134 aa		7.97	□□□□□ -1.13
RPN5	YDL147W	APC11	Q12157	165 aa		7.97	□□□□□ -1.13
RPN5	YDL147W	SCD5	P34758	872 aa		7.96	□□□□□ -1.14
RPN5	YDL147W	SUT1	P53032	299 aa	Known RBP	7.96	□□□□□ -1.14
RPN5	YDL147W	SUM1	P46676	1062 aa		7.95	□□□□□ -1.14
RPN5	YDL147W	HED1	Q03937	162 aa		7.95	□□□□□ -1.14
RPN5	YDL147W	STB3	Q12427	513 aa		7.95	□□□□□ -1.14
RPN5	YDL147W	MRPL33	P20084	86 aa		7.94	□□□□□ -1.14
RPN5	YDL147W	GCD6	P32501	712 aa	Known RBP	7.94	□□□□□ -1.14
RPN5	YDL147W	MET1	P36150	593 aa		7.94	□□□□□ -1.14
RPN5	YDL147W	JIP5	Q06214	492 aa	Predicted RBP	7.94	□□□□□ -1.14
RPN5	YDL147W	HXT5	P38695	592 aa		7.93	□□□□□ -1.14
RPN5	YDL147W	ALA1	P40825	983 aa	Known RBP	7.93	□□□□□ -1.14
RPN5	YDL147W	YPQ2	Q06328	317 aa		7.93	□□□□□ -1.14
RPN5	YDL147W	RPB10	P22139	70 aa		7.92	□□□□□ -1.14
RPN5	YDL147W	SMC1	P32908	1225 aa		7.92	□□□□□ -1.14
RPN5	YDL147W	RPT1	P33299	467 aa	Known RBP	7.92	□□□□□ -1.14
RPN5	YDL147W	SAM37	P50110	327 aa		7.92	□□□□□ -1.14
RPN5	YDL147W	YNL011C	P53980	444 aa		7.92	□□□□□ -1.14
RPN5	YDL147W	GPI13	Q07830	1017 aa		7.92	□□□□□ -1.14
RPN5	YDL147W	PHO4	P07270	312 aa	Known RBP	7.91	□□□□□ -1.14
RPN5	YDL147W	HXT8	P40886	569 aa		7.9	□□□□□ -1.14
RPN5	YDL147W	NNF1	P47149	201 aa		7.9	□□□□□ -1.14
RPN5	YDL147W	VPS35	P34110	944 aa		7.89	□□□□□ -1.15
RPN5	YDL147W	LDH1	P38139	375 aa		7.89	□□□□□ -1.15
RPN5	YDL147W	CDC55	Q00362	526 aa		7.89	□□□□□ -1.15
RPN5	YDL147W	OXR1	Q08952	273 aa		7.89	□□□□□ -1.15
RPN5	YDL147W	MNL2	Q12205	849 aa		7.89	□□□□□ -1.15
RPN5	YDL147W	Q0182	Q9ZZW1	134 aa		7.89	□□□□□ -1.15
RPN5	YDL147W	VMA3	P25515	160 aa		7.88	□□□□□ -1.15
RPN5	YDL147W	FIR1	P40020	876 aa		7.88	□□□□□ -1.15
RPN5	YDL147W	AIR1	P40507	360 aa	Known RBP	7.88	□□□□□ -1.15
RPN5	YDL147W	DAK2	P43550	591 aa		7.87	□□□□□ -1.15
RPN5	YDL147W	UGA3	P26370	528 aa		7.86	□□□□□ -1.15
RPN5	YDL147W	PEP7	P32609	515 aa		7.86	□□□□□ -1.15
RPN5	YDL147W	YBR287W	P38355	427 aa		7.86	□□□□□ -1.15
RPN5	YDL147W	CIC1	P38779	376 aa	Known RBP	7.86	□□□□□ -1.15
RPN5	YDL147W	DYS1	P38791	387 aa		7.86	□□□□□ -1.15
RPN5	YDL147W	BRE2	P43132	505 aa		7.86	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms