RNA–Protein interactions for RNA: YDL132W

CDC53, Transcript of Cullin, yeast

Gene CDC53, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC53	YDL132W	MAD1	P40957	749 aa		3.04	□□□□□ -1.92
CDC53	YDL132W	YJL171C	P46992	396 aa		3.04	□□□□□ -1.92
CDC53	YDL132W	ACF4	P47129	309 aa		3.04	□□□□□ -1.92
CDC53	YDL132W	APP1	P53933	587 aa		3.04	□□□□□ -1.92
CDC53	YDL132W	VAC17	P25591	423 aa		3.04	□□□□□ -1.92
CDC53	YDL132W	RPT1	P33299	467 aa	Known RBP	3.04	□□□□□ -1.92
CDC53	YDL132W	APL6	P46682	809 aa		3.04	□□□□□ -1.92
CDC53	YDL132W	STB3	Q12427	513 aa		3.04	□□□□□ -1.92
CDC53	YDL132W	RPS6A	P0CX37	236 aa	Known RBP	3.03	□□□□□ -1.92
CDC53	YDL132W	RPS6B	P0CX38	236 aa	Predicted RBP	3.03	□□□□□ -1.92
CDC53	YDL132W	DAT1	P13483	248 aa	Known RBP	3.03	□□□□□ -1.92
CDC53	YDL132W	RRD1	P40454	393 aa	Known RBP	3.03	□□□□□ -1.92
CDC53	YDL132W	SPR3	P41901	512 aa		3.03	□□□□□ -1.92
CDC53	YDL132W	ARH1	P48360	493 aa		3.03	□□□□□ -1.92
CDC53	YDL132W	MCM2	P29469	868 aa		3.03	□□□□□ -1.92
CDC53	YDL132W	MET4	P32389	672 aa		3.03	□□□□□ -1.92
CDC53	YDL132W	ISC10	P32645	267 aa		3.03	□□□□□ -1.92
CDC53	YDL132W	OCA5	P38738	679 aa		3.03	□□□□□ -1.92
CDC53	YDL132W	VAC8	P39968	578 aa		3.03	□□□□□ -1.92
CDC53	YDL132W	FYV10	P40492	516 aa		3.03	□□□□□ -1.92
CDC53	YDL132W	SUT1	P53032	299 aa	Known RBP	3.03	□□□□□ -1.92
CDC53	YDL132W	SPR28	Q04921	423 aa		3.03	□□□□□ -1.92
CDC53	YDL132W	SPT2	P06843	333 aa	Predicted RBP	3.02	□□□□□ -1.93
CDC53	YDL132W	UTR2	P32623	467 aa		3.02	□□□□□ -1.93
CDC53	YDL132W	CST6	P40535	587 aa		3.02	□□□□□ -1.93
CDC53	YDL132W	BNI4	P53858	892 aa		3.02	□□□□□ -1.93
CDC53	YDL132W	RPB10	P22139	70 aa		3.02	□□□□□ -1.93
CDC53	YDL132W	SUV3	P32580	737 aa		3.02	□□□□□ -1.93
CDC53	YDL132W	PPG1	P32838	368 aa		3.02	□□□□□ -1.93
CDC53	YDL132W	TBS1	P38114	1094 aa		3.02	□□□□□ -1.93
CDC53	YDL132W	ALD6	P54115	500 aa	Known RBP	3.02	□□□□□ -1.93
CDC53	YDL132W	TRS120	Q04183	1289 aa		3.02	□□□□□ -1.93
CDC53	YDL132W	GYP1	Q08484	637 aa		3.02	□□□□□ -1.93
CDC53	YDL132W	SRP40	P32583	406 aa	Predicted RBP	3.01	□□□□□ -1.93
CDC53	YDL132W	SPT23	P35210	1082 aa		3.01	□□□□□ -1.93
CDC53	YDL132W	BOI1	P38041	980 aa	Known RBP	3.01	□□□□□ -1.93
CDC53	YDL132W	CWC24	P53769	259 aa		3.01	□□□□□ -1.93
CDC53	YDL132W	FPR4	Q06205	392 aa	Predicted RBP	3.01	□□□□□ -1.93
CDC53	YDL132W	YPR015C	Q12531	247 aa		3.01	□□□□□ -1.93
CDC53	YDL132W	SWI5	P08153	709 aa		3.01	□□□□□ -1.93
CDC53	YDL132W	YJR107W	P47145	328 aa		3.01	□□□□□ -1.93
CDC53	YDL132W	PUS5	Q06244	254 aa		3.01	□□□□□ -1.93
CDC53	YDL132W	BDS1	Q08347	646 aa		3.01	□□□□□ -1.93
CDC53	YDL132W	MNL2	Q12205	849 aa		3.01	□□□□□ -1.93
CDC53	YDL132W	MAG2	Q06436	670 aa	Known RBP	3	□□□□□ -1.93
CDC53	YDL132W	YOL098C	Q12496	1037 aa		3	□□□□□ -1.93
CDC53	YDL132W	LSO1	Q3E827	93 aa		3	□□□□□ -1.93
CDC53	YDL132W	GCD6	P32501	712 aa	Known RBP	3	□□□□□ -1.93
CDC53	YDL132W	YKL091C	P33324	310 aa	Known RBP	3	□□□□□ -1.93
CDC53	YDL132W	SPC42	P36094	363 aa		3	□□□□□ -1.93
CDC53	YDL132W	YBR197C	P38306	217 aa		3	□□□□□ -1.93
CDC53	YDL132W	UFD2	P54860	961 aa		3	□□□□□ -1.93
CDC53	YDL132W	WRS1	Q12109	432 aa	Known RBP	3	□□□□□ -1.93
CDC53	YDL132W	CLN2	P20438	545 aa		2.99	□□□□□ -1.93
CDC53	YDL132W	UBP1	P25037	809 aa		2.99	□□□□□ -1.93
CDC53	YDL132W	MKS1	P34072	584 aa		2.99	□□□□□ -1.93
CDC53	YDL132W	RPS26A	P39938	119 aa	Known RBP	2.99	□□□□□ -1.93
CDC53	YDL132W	RPS26B	P39939	119 aa	Known RBP	2.99	□□□□□ -1.93
CDC53	YDL132W	OXR1	Q08952	273 aa		2.99	□□□□□ -1.93
CDC53	YDL132W	NGR1	P32831	672 aa	Known RBP	2.99	□□□□□ -1.93
CDC53	YDL132W	UTP7	P40055	554 aa	Known RBP	2.99	□□□□□ -1.93
CDC53	YDL132W	DAK2	P43550	591 aa		2.99	□□□□□ -1.93
CDC53	YDL132W	ALD3	P54114	506 aa		2.99	□□□□□ -1.93
CDC53	YDL132W	FRK1	Q03002	865 aa	Predicted RBP	2.99	□□□□□ -1.93
CDC53	YDL132W	CAB1	Q04430	367 aa		2.99	□□□□□ -1.93
CDC53	YDL132W	PET112	P33893	541 aa		2.98	□□□□□ -1.93
CDC53	YDL132W	RNH70	P53331	553 aa		2.98	□□□□□ -1.93
CDC53	YDL132W	SYH1	Q02875	849 aa	Known RBP	2.98	□□□□□ -1.93
CDC53	YDL132W	GPI13	Q07830	1017 aa		2.98	□□□□□ -1.93
CDC53	YDL132W	ISU1	Q03020	165 aa		2.98	□□□□□ -1.93
CDC53	YDL132W	PHO4	P07270	312 aa	Known RBP	2.97	□□□□□ -1.93
CDC53	YDL132W	TPD3	P31383	635 aa		2.97	□□□□□ -1.93
CDC53	YDL132W	FBP26	P32604	452 aa		2.97	□□□□□ -1.93
CDC53	YDL132W	SAM37	P50110	327 aa		2.97	□□□□□ -1.93
CDC53	YDL132W	YAF9	P53930	226 aa		2.97	□□□□□ -1.93
CDC53	YDL132W	DFG5	Q05031	458 aa		2.97	□□□□□ -1.93
CDC53	YDL132W	ESF1	Q06344	628 aa	Known RBP	2.97	□□□□□ -1.93
CDC53	YDL132W	CDC53	Q12018	815 aa	Known RBP	2.97	□□□□□ -1.93
CDC53	YDL132W	RPP2B	P02400	110 aa	Known RBP	2.97	□□□□□ -1.93
CDC53	YDL132W	CIC1	P38779	376 aa	Known RBP	2.97	□□□□□ -1.93
CDC53	YDL132W	NMD2	P38798	1089 aa	Known RBP	2.97	□□□□□ -1.93
CDC53	YDL132W	DLD3	P39976	496 aa	Known RBP	2.97	□□□□□ -1.93
CDC53	YDL132W	VPS16	Q03308	798 aa		2.97	□□□□□ -1.93
CDC53	YDL132W	PRE3	P38624	215 aa		2.96	□□□□□ -1.94
CDC53	YDL132W	ALA1	P40825	983 aa	Known RBP	2.96	□□□□□ -1.94
CDC53	YDL132W	EMW1	P42842	904 aa	Known RBP	2.96	□□□□□ -1.94
CDC53	YDL132W	NOC3	Q07896	663 aa	Predicted RBP	2.96	□□□□□ -1.94
CDC53	YDL132W	WTM2	Q12206	467 aa		2.96	□□□□□ -1.94
CDC53	YDL132W	YOR131C	Q12486	218 aa		2.96	□□□□□ -1.94
CDC53	YDL132W	MOD5	P07884	428 aa		2.95	□□□□□ -1.94
CDC53	YDL132W	MRPL33	P20084	86 aa		2.95	□□□□□ -1.94
CDC53	YDL132W	CHL1	P22516	861 aa	Predicted RBP	2.95	□□□□□ -1.94
CDC53	YDL132W	RRP14	P36080	434 aa	Known RBP	2.95	□□□□□ -1.94
CDC53	YDL132W	YHL008C	P38750	627 aa		2.95	□□□□□ -1.94
CDC53	YDL132W	OSW7	P43611	510 aa		2.95	□□□□□ -1.94
CDC53	YDL132W	BDP1	P46678	594 aa		2.95	□□□□□ -1.94
CDC53	YDL132W	YNL011C	P53980	444 aa		2.95	□□□□□ -1.94
CDC53	YDL132W	CDC55	Q00362	526 aa		2.95	□□□□□ -1.94
CDC53	YDL132W	BSC2	Q05611	235 aa		2.95	□□□□□ -1.94
CDC53	YDL132W	PIN2	Q12057	282 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms