RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W DUS1P53759 423 aaKnown RBP2.9□□□□□ -1.95
NUP170YBL079W NUP145P49687 1317 aa2.9□□□□□ -1.95
NUP170YBL079W TY4B-HP0C2J7 1802 aa2.9□□□□□ -1.95
NUP170YBL079W TY4B-JP47024 1803 aa2.9□□□□□ -1.95
NUP170YBL079W TEA1P47988 759 aa2.9□□□□□ -1.95
NUP170YBL079W INP54Q08227 384 aaKnown RBP2.9□□□□□ -1.95
NUP170YBL079W TIM23P32897 222 aa2.89□□□□□ -1.95
NUP170YBL079W MAC1P35192 417 aa2.89□□□□□ -1.95
NUP170YBL079W PAP2P53632 584 aaKnown RBP2.89□□□□□ -1.95
NUP170YBL079W SDH2P21801 266 aa2.89□□□□□ -1.95
NUP170YBL079W BUD2P33314 1104 aa2.89□□□□□ -1.95
NUP170YBL079W SNU71P53207 620 aaKnown RBP2.89□□□□□ -1.95
NUP170YBL079W ADE16P54113 591 aaKnown RBP2.89□□□□□ -1.95
NUP170YBL079W NOP8Q08287 484 aaPredicted RBP2.89□□□□□ -1.95
NUP170YBL079W VAB2P40003 282 aa2.89□□□□□ -1.95
NUP170YBL079W CWH41P53008 833 aa2.89□□□□□ -1.95
NUP170YBL079W YLL067CQ07888 1374 aa2.89□□□□□ -1.95
NUP170YBL079W PIF1P07271 859 aa2.89□□□□□ -1.95
NUP170YBL079W EMP47P43555 445 aa2.89□□□□□ -1.95
NUP170YBL079W YNL050CP53952 270 aa2.89□□□□□ -1.95
NUP170YBL079W RPP0P05317 312 aaKnown RBP2.88□□□□□ -1.95
NUP170YBL079W SER1P33330 395 aaKnown RBP2.88□□□□□ -1.95
NUP170YBL079W LYS14P40971 790 aa2.88□□□□□ -1.95
NUP170YBL079W MSH4P40965 878 aaPredicted RBP2.88□□□□□ -1.95
NUP170YBL079W DNM1P54861 757 aa2.88□□□□□ -1.95
NUP170YBL079W PER1P25625 357 aa2.88□□□□□ -1.95
NUP170YBL079W SPR3P41901 512 aa2.88□□□□□ -1.95
NUP170YBL079W YRB30P53107 440 aaPredicted RBP2.88□□□□□ -1.95
NUP170YBL079W RBA50Q04418 439 aa2.88□□□□□ -1.95
NUP170YBL079W DPH6Q12429 685 aa2.88□□□□□ -1.95
NUP170YBL079W AKL1P38080 1108 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W RPN1P38764 993 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W YLR271WQ06152 274 aa2.87□□□□□ -1.95
NUP170YBL079W SAC3P46674 1301 aa2.87□□□□□ -1.95
NUP170YBL079W YKR023WP36119 530 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W EAF6P47128 113 aa2.87□□□□□ -1.95
NUP170YBL079W MAK21Q12176 1025 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W PSD2P53037 1138 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W RIM15P43565 1770 aa2.87□□□□□ -1.95
NUP170YBL079W YLR278CQ05854 1341 aa2.87□□□□□ -1.95
NUP170YBL079W TPS3P38426 1054 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W YIL089WP40500 205 aa2.87□□□□□ -1.95
NUP170YBL079W MTC5Q03897 1148 aa2.87□□□□□ -1.95
NUP170YBL079W GAS4Q08271 471 aa2.87□□□□□ -1.95
NUP170YBL079W CLF1Q12309 687 aaPredicted RBP2.87□□□□□ -1.95
NUP170YBL079W HEM1P09950 548 aaPredicted RBP2.86□□□□□ -1.95
NUP170YBL079W BUD27P43573 796 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
NUP170YBL079W FAP1P53971 965 aa2.86□□□□□ -1.95
NUP170YBL079W PKH1Q03407 766 aa2.86□□□□□ -1.95
NUP170YBL079W PDS5Q04264 1277 aa2.86□□□□□ -1.95
NUP170YBL079W ICL2Q12031 575 aa2.86□□□□□ -1.95
NUP170YBL079W THS1P04801 734 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W TPM1P17536 199 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W HSP104P31539 908 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W APE3P37302 537 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W ETP1P38748 585 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W SSF1P38789 453 aaPredicted RBP2.86□□□□□ -1.95
NUP170YBL079W ZDS1P50111 915 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W TOP1P04786 769 aa2.86□□□□□ -1.95
NUP170YBL079W HVG1P0CE11 249 aa2.86□□□□□ -1.95
NUP170YBL079W MCM6P53091 1017 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W DIT2P21595 489 aa2.85□□□□□ -1.95
NUP170YBL079W AFG2P32794 780 aa2.85□□□□□ -1.95
NUP170YBL079W CST6P40535 587 aa2.85□□□□□ -1.95
NUP170YBL079W TUM1Q08686 304 aaKnown RBP2.85□□□□□ -1.95
NUP170YBL079W DPL1Q05567 589 aa2.85□□□□□ -1.95
NUP170YBL079W SIS2P36024 562 aa2.85□□□□□ -1.95
NUP170YBL079W NET1P47035 1189 aa2.85□□□□□ -1.95
NUP170YBL079W PDR18P53756 1333 aa2.85□□□□□ -1.95
NUP170YBL079W BFA1P47113 574 aa2.85□□□□□ -1.95
NUP170YBL079W MET7Q08645 548 aa2.85□□□□□ -1.95
NUP170YBL079W SNU66Q12420 587 aaPredicted RBP2.85□□□□□ -1.95
NUP170YBL079W MPH3P0CE00 602 aa2.84□□□□□ -1.95
NUP170YBL079W MXR1P40029 184 aa2.84□□□□□ -1.95
NUP170YBL079W NOP2P40991 618 aaKnown RBP2.84□□□□□ -1.95
NUP170YBL079W MPP10P47083 593 aaKnown RBP2.84□□□□□ -1.95
NUP170YBL079W SRC1Q03707 834 aa2.84□□□□□ -1.95
NUP170YBL079W YLR225CQ05948 407 aaKnown RBP2.84□□□□□ -1.95
NUP170YBL079W GPT2P36148 743 aa2.84□□□□□ -1.95
NUP170YBL079W VPS53P47061 822 aa2.84□□□□□ -1.95
NUP170YBL079W GYP7P48365 746 aa2.84□□□□□ -1.95
NUP170YBL079W ECM16Q04217 1267 aaKnown RBP2.84□□□□□ -1.96
NUP170YBL079W DIP2Q12220 943 aaPredicted RBP2.84□□□□□ -1.96
NUP170YBL079W GIN4Q12263 1142 aa2.84□□□□□ -1.96
NUP170YBL079W CSR2Q12734 1121 aa2.84□□□□□ -1.96
NUP170YBL079W MLP1Q02455 1875 aaKnown RBP2.84□□□□□ -1.96
NUP170YBL079W AFT1P22149 690 aa2.83□□□□□ -1.96
NUP170YBL079W APL2P36000 726 aaPredicted RBP2.83□□□□□ -1.96
NUP170YBL079W LDH1P38139 375 aa2.83□□□□□ -1.96
NUP170YBL079W JJJ2P46997 583 aa2.83□□□□□ -1.96
NUP170YBL079W JIP4Q03361 876 aa2.83□□□□□ -1.96
NUP170YBL079W YRF1-3P0CX14 1859 aa2.83□□□□□ -1.96
NUP170YBL079W YRF1-7P0CX15 1859 aa2.83□□□□□ -1.96
NUP170YBL079W YRF1-6P53819 1859 aa2.83□□□□□ -1.96
NUP170YBL079W ERG12P07277 443 aa2.83□□□□□ -1.96
NUP170YBL079W PAH1P32567 862 aa2.83□□□□□ -1.96
NUP170YBL079W SEC8P32855 1065 aa2.83□□□□□ -1.96
NUP170YBL079W NTH2P35172 780 aa2.83□□□□□ -1.96
NUP170YBL079W MCD4P36051 919 aa2.83□□□□□ -1.96
NUP170YBL079W AVT3P36062 692 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms