RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeastyeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC3YAL011W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
SWC3YAL011W HEF3P53978 1044 aaKnown RBP5.54□□□□□ -1.52
SWC3YAL011W RTT109Q07794 436 aa5.54□□□□□ -1.52
SWC3YAL011W RAD2P07276 1031 aa5.54□□□□□ -1.52
SWC3YAL011W HOP09932 586 aa5.54□□□□□ -1.52
SWC3YAL011W TY4A-JP47023 414 aa5.54□□□□□ -1.52
SWC3YAL011W CSN12P47130 423 aa5.54□□□□□ -1.52
SWC3YAL011W APC1P53886 1748 aa5.53□□□□□ -1.52
SWC3YAL011W RPO41P13433 1351 aaKnown RBP5.53□□□□□ -1.52
SWC3YAL011W YMR196WQ04336 1088 aa5.53□□□□□ -1.52
SWC3YAL011W SSB1P11484 613 aaKnown RBP5.52□□□□□ -1.53
SWC3YAL011W PMC1P38929 1173 aaPredicted RBP5.52□□□□□ -1.53
SWC3YAL011W SSB2P40150 613 aaKnown RBP5.52□□□□□ -1.53
SWC3YAL011W YIL092WP40497 633 aa5.52□□□□□ -1.53
SWC3YAL011W THI12P42883 340 aa5.52□□□□□ -1.53
SWC3YAL011W THI5P43534 340 aa5.52□□□□□ -1.53
SWC3YAL011W THI11P47183 340 aa5.52□□□□□ -1.53
SWC3YAL011W THI13Q07748 340 aa5.52□□□□□ -1.53
SWC3YAL011W TSR4P25040 408 aa5.51□□□□□ -1.53
SWC3YAL011W AKL1P38080 1108 aaKnown RBP5.51□□□□□ -1.53
SWC3YAL011W TFG1P41895 735 aaPredicted RBP5.51□□□□□ -1.53
SWC3YAL011W TFC8Q12308 588 aa5.51□□□□□ -1.53
SWC3YAL011W URB1P34241 1764 aaKnown RBP5.51□□□□□ -1.53
SWC3YAL011W FKS3Q04952 1785 aa5.51□□□□□ -1.53
SWC3YAL011W PUP1P25043 261 aa5.51□□□□□ -1.53
SWC3YAL011W ISW1P38144 1129 aa5.51□□□□□ -1.53
SWC3YAL011W YPR204WQ08995 1032 aa5.51□□□□□ -1.53
SWC3YAL011W YRF1-2P40105 1681 aa5.51□□□□□ -1.53
SWC3YAL011W GAL11P19659 1081 aa5.5□□□□□ -1.53
SWC3YAL011W COQ8P27697 501 aa5.5□□□□□ -1.53
SWC3YAL011W YML083CQ04526 418 aa5.5□□□□□ -1.53
SWC3YAL011W BIO2P32451 375 aa5.49□□□□□ -1.53
SWC3YAL011W PPG1P32838 368 aa5.49□□□□□ -1.53
SWC3YAL011W MAP2P38174 421 aaKnown RBP5.49□□□□□ -1.53
SWC3YAL011W BUD27P43573 796 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
SWC3YAL011W POL32P47110 350 aa5.49□□□□□ -1.53
SWC3YAL011W CWC22P53333 577 aaKnown RBP5.49□□□□□ -1.53
SWC3YAL011W YDL121CQ07541 149 aa5.49□□□□□ -1.53
SWC3YAL011W RLP24Q07915 199 aaKnown RBP5.49□□□□□ -1.53
SWC3YAL011W MSC6Q08818 692 aaKnown RBP5.49□□□□□ -1.53
SWC3YAL011W VMA4P22203 233 aaKnown RBP5.49□□□□□ -1.53
SWC3YAL011W RTG2P32608 588 aaKnown RBP5.49□□□□□ -1.53
SWC3YAL011W RPS0AP32905 252 aaKnown RBP5.49□□□□□ -1.53
SWC3YAL011W BOI2P39969 1040 aa5.49□□□□□ -1.53
SWC3YAL011W DSD1P53095 428 aa5.49□□□□□ -1.53
SWC3YAL011W GIR2Q03768 265 aaPredicted RBP5.49□□□□□ -1.53
SWC3YAL011W YRF1-4O13559 1382 aa5.49□□□□□ -1.53
SWC3YAL011W SIR4P11978 1358 aa5.49□□□□□ -1.53
SWC3YAL011W ALG12P53730 551 aa5.48□□□□□ -1.53
SWC3YAL011W TMA64Q04600 565 aaKnown RBP5.48□□□□□ -1.53
SWC3YAL011W MAG2Q06436 670 aaKnown RBP5.48□□□□□ -1.53
SWC3YAL011W YBL113CQ7M4S9 792 aa5.48□□□□□ -1.53
SWC3YAL011W ATE1P16639 503 aa5.47□□□□□ -1.53
SWC3YAL011W RPT2P40327 437 aaKnown RBP5.47□□□□□ -1.53
SWC3YAL011W RRT14P40470 206 aa5.47□□□□□ -1.53
SWC3YAL011W BBC1P47068 1157 aa5.47□□□□□ -1.53
SWC3YAL011W YGL081WP53156 320 aa5.47□□□□□ -1.53
SWC3YAL011W YNL050CP53952 270 aa5.47□□□□□ -1.53
SWC3YAL011W PUF6Q04373 656 aaKnown RBP5.47□□□□□ -1.53
SWC3YAL011W YOL057WQ08225 711 aa5.47□□□□□ -1.53
SWC3YAL011W HSP104P31539 908 aaKnown RBP5.47□□□□□ -1.53
SWC3YAL011W NTH2P35172 780 aa5.47□□□□□ -1.53
SWC3YAL011W YBL036CP38197 257 aa5.47□□□□□ -1.53
SWC3YAL011W YBR287WP38355 427 aa5.47□□□□□ -1.53
SWC3YAL011W GYP7P48365 746 aa5.47□□□□□ -1.53
SWC3YAL011W STB3Q12427 513 aa5.47□□□□□ -1.53
SWC3YAL011W UBP14P38237 781 aaKnown RBP5.46□□□□□ -1.54
SWC3YAL011W UBP10P53874 792 aaPredicted RBP5.46□□□□□ -1.54
SWC3YAL011W CIT2P08679 460 aa5.45□□□□□ -1.54
SWC3YAL011W PRP5P21372 849 aaPredicted RBP5.45□□□□□ -1.54
SWC3YAL011W PRP45P28004 379 aaPredicted RBP5.45□□□□□ -1.54
SWC3YAL011W OPY1P38271 328 aa5.45□□□□□ -1.54
SWC3YAL011W PPX1P38698 397 aa5.45□□□□□ -1.54
SWC3YAL011W CEF1Q03654 590 aaPredicted RBP5.45□□□□□ -1.54
SWC3YAL011W POB3Q04636 552 aaKnown RBP5.45□□□□□ -1.54
SWC3YAL011W TRP5P00931 707 aaKnown RBP5.45□□□□□ -1.54
SWC3YAL011W MRM1P25270 412 aa5.45□□□□□ -1.54
SWC3YAL011W KTR1P27810 393 aaKnown RBP5.45□□□□□ -1.54
SWC3YAL011W MFT1P33441 392 aaKnown RBP5.45□□□□□ -1.54
SWC3YAL011W IME2P32581 645 aa5.44□□□□□ -1.54
SWC3YAL011W MAM1P40065 302 aa5.44□□□□□ -1.54
SWC3YAL011W AIM21P40563 679 aa5.44□□□□□ -1.54
SWC3YAL011W IOC3P43596 787 aa5.44□□□□□ -1.54
SWC3YAL011W MSB3P48566 633 aaPredicted RBP5.44□□□□□ -1.54
SWC3YAL011W SRT1Q03175 343 aa5.44□□□□□ -1.54
SWC3YAL011W SLM3Q12093 417 aa5.44□□□□□ -1.54
SWC3YAL011W ERP5P38819 212 aa5.43□□□□□ -1.54
SWC3YAL011W ERP2P39704 215 aa5.43□□□□□ -1.54
SWC3YAL011W AOS1Q06624 347 aa5.43□□□□□ -1.54
SWC3YAL011W BMS1Q08965 1183 aaKnown RBP5.43□□□□□ -1.54
SWC3YAL011W PSE1P32337 1089 aaKnown RBP5.43□□□□□ -1.54
SWC3YAL011W MPE1P35728 441 aaKnown RBP5.43□□□□□ -1.54
SWC3YAL011W NOC2P39744 710 aaKnown RBP5.43□□□□□ -1.54
SWC3YAL011W RPN4Q03465 531 aa5.43□□□□□ -1.54
SWC3YAL011W NKP1Q12493 238 aa5.43□□□□□ -1.54
SWC3YAL011W COQ4O13525 335 aa5.42□□□□□ -1.54
SWC3YAL011W SUP45P12385 437 aaKnown RBP5.42□□□□□ -1.54
SWC3YAL011W RPA135P22138 1203 aaKnown RBP5.42□□□□□ -1.54
SWC3YAL011W SRP40P32583 406 aaPredicted RBP5.42□□□□□ -1.54
SWC3YAL011W ILV3P39522 585 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms