RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PPLO60437 1756 aa24.97■■□□□ 1.59
PHGDH-230ENST00000641927 IFT172Q9UG01 1749 aa24.97■■□□□ 1.59
PHGDH-230ENST00000641927 STAC3Q96MF2 364 aa24.97■■□□□ 1.59
PHGDH-230ENST00000641927 ZNF142P52746 1687 aaPredicted RBP24.97■■□□□ 1.59
PHGDH-230ENST00000641927 RIMS2Q9UQ26 1411 aa24.96■■□□□ 1.59
PHGDH-230ENST00000641927 VGFO15240 615 aaPredicted RBP24.95■■□□□ 1.58
PHGDH-230ENST00000641927 NBPF8Q3BBV2 869 aa24.95■■□□□ 1.58
PHGDH-230ENST00000641927 TMEM2Q9UHN6 1383 aa24.95■■□□□ 1.58
PHGDH-230ENST00000641927 ADGRF5Q8IZF2 1346 aa24.94■■□□□ 1.58
PHGDH-230ENST00000641927 MYOM2P54296 1465 aa24.94■■□□□ 1.58
PHGDH-230ENST00000641927 HDGFP51858 240 aaKnown RBP24.94■■□□□ 1.58
PHGDH-230ENST00000641927 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
PHGDH-230ENST00000641927 PRAG1Q86YV5 1406 aa24.93■■□□□ 1.58
PHGDH-230ENST00000641927 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.92■■□□□ 1.58
PHGDH-230ENST00000641927 ZFYVE9O95405 1425 aa24.91■■□□□ 1.58
PHGDH-230ENST00000641927 EID1Q9Y6B2 187 aa24.9■■□□□ 1.58
PHGDH-230ENST00000641927 TXNDC2Q86VQ3 553 aa24.88■■□□□ 1.57
PHGDH-230ENST00000641927 SLIT1O75093 1534 aa24.88■■□□□ 1.57
PHGDH-230ENST00000641927 ARHGAP23Q9P227 1491 aa24.86■■□□□ 1.57
PHGDH-230ENST00000641927 NRXN1Q9ULB1 1477 aa24.86■■□□□ 1.57
PHGDH-230ENST00000641927 LTKP29376 864 aa24.85■■□□□ 1.57
PHGDH-230ENST00000641927 BCANQ96GW7 911 aa24.85■■□□□ 1.57
PHGDH-230ENST00000641927 PIK3C2GO75747 1445 aa24.85■■□□□ 1.57
PHGDH-230ENST00000641927 CFAP70Q5T0N1 1121 aa24.82■■□□□ 1.56
PHGDH-230ENST00000641927 ANKLE2Q86XL3 938 aa24.82■■□□□ 1.56
PHGDH-230ENST00000641927 ROCK2O75116 1388 aaKnown RBP24.82■■□□□ 1.56
PHGDH-230ENST00000641927 TRPM1Q7Z4N2 1603 aa24.82■■□□□ 1.56
PHGDH-230ENST00000641927 RALGAPBQ86X10 1494 aa24.81■■□□□ 1.56
PHGDH-230ENST00000641927 SCAF11Q99590 1463 aaKnown RBP24.81■■□□□ 1.56
PHGDH-230ENST00000641927 HSPA2P54652 639 aa24.8■■□□□ 1.56
PHGDH-230ENST00000641927 LMTK3Q96Q04 1460 aa24.8■■□□□ 1.56
PHGDH-230ENST00000641927 NBPF1Q3BBV0 1214 aa24.79■■□□□ 1.56
PHGDH-230ENST00000641927 C14orf93Q9H972 538 aaKnown RBP24.78■■□□□ 1.56
PHGDH-230ENST00000641927 PLEKHG1Q9ULL1 1385 aa24.77■■□□□ 1.56
PHGDH-230ENST00000641927 CARD11Q9BXL7 1154 aa24.77■■□□□ 1.56
PHGDH-230ENST00000641927 KIAA1210Q9ULL0 1709 aa24.76■■□□□ 1.55
PHGDH-230ENST00000641927 LAMC1P11047 1609 aa24.74■■□□□ 1.55
PHGDH-230ENST00000641927 NCKAP5LQ9HCH0 1330 aa24.74■■□□□ 1.55
PHGDH-230ENST00000641927 IQGAP1P46940 1657 aa24.73■■□□□ 1.55
PHGDH-230ENST00000641927 SETBP1Q9Y6X0 1596 aa24.73■■□□□ 1.55
PHGDH-230ENST00000641927 ALKQ9UM73 1620 aa24.73■■□□□ 1.55
PHGDH-230ENST00000641927 TMEM132EQ6IEE7 984 aa24.72■■□□□ 1.55
PHGDH-230ENST00000641927 NRXN3Q9Y4C0 1643 aa24.71■■□□□ 1.55
PHGDH-230ENST00000641927 SLC26A8Q96RN1 970 aa24.71■■□□□ 1.55
PHGDH-230ENST00000641927 POLR1AO95602 1720 aaPredicted RBP24.7■■□□□ 1.55
PHGDH-230ENST00000641927 GPRASP1Q5JY77 1395 aa24.69■■□□□ 1.54
PHGDH-230ENST00000641927 NPHP4O75161 1426 aaPredicted RBP24.68■■□□□ 1.54
PHGDH-230ENST00000641927 EIF4G2P78344 907 aaKnown RBP eCLIP24.67■■□□□ 1.547e-14■■■■■ 63.8
PHGDH-230ENST00000641927 ADAMTS13Q76LX8 1427 aa24.67■■□□□ 1.54
PHGDH-230ENST00000641927 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
PHGDH-230ENST00000641927 USP47Q96K76 1375 aa24.65■■□□□ 1.54
PHGDH-230ENST00000641927 ADGRB1O14514 1584 aa24.65■■□□□ 1.54
PHGDH-230ENST00000641927 MED14O60244 1454 aa24.64■■□□□ 1.54
PHGDH-230ENST00000641927 STK26Q9P289 416 aa24.64■■□□□ 1.53
PHGDH-230ENST00000641927 ASXL1Q8IXJ9 1541 aa24.64■■□□□ 1.53
PHGDH-230ENST00000641927 METP08581 1390 aa24.63■■□□□ 1.53
PHGDH-230ENST00000641927 HIRIP3Q9BW71 556 aaPredicted RBP24.63■■□□□ 1.53
PHGDH-230ENST00000641927 SETD1AO15047 1707 aaKnown RBP24.63■■□□□ 1.53
PHGDH-230ENST00000641927 HSPA5P11021 654 aaKnown RBP24.62■■□□□ 1.53
PHGDH-230ENST00000641927 TBX22Q9Y458 520 aa24.62■■□□□ 1.53
PHGDH-230ENST00000641927 DIP2AQ14689 1571 aa24.62■■□□□ 1.53
PHGDH-230ENST00000641927 TRAK1Q9UPV9 953 aa24.62■■□□□ 1.53
PHGDH-230ENST00000641927 YTHDC2Q9H6S0 1430 aaKnown RBP24.6■■□□□ 1.53
PHGDH-230ENST00000641927 EIF3AQ14152 1382 aaKnown RBP24.58■■□□□ 1.52
PHGDH-230ENST00000641927 STRCQ7RTU9 1775 aa24.57■■□□□ 1.52
PHGDH-230ENST00000641927 ST20-MTHFSA0A0A6YYL1 179 aa24.56■■□□□ 1.52
PHGDH-230ENST00000641927 LRPPRCP42704 1394 aaKnown RBP24.56■■□□□ 1.52
PHGDH-230ENST00000641927 AMOTL2Q9Y2J4 779 aa24.52■■□□□ 1.52
PHGDH-230ENST00000641927 PIK3R4Q99570 1358 aa24.51■■□□□ 1.51
PHGDH-230ENST00000641927 PTPRUQ92729 1446 aa24.51■■□□□ 1.51
PHGDH-230ENST00000641927 ABCC11Q96J66 1382 aa24.51■■□□□ 1.51
PHGDH-230ENST00000641927 ZNF316A6NFI3 1004 aaPredicted RBP24.5■■□□□ 1.51
PHGDH-230ENST00000641927 POGKQ9P215 609 aa24.5■■□□□ 1.51
PHGDH-230ENST00000641927 CENPJQ9HC77 1338 aaPredicted RBP24.49■■□□□ 1.51
PHGDH-230ENST00000641927 ARHGEF28Q8N1W1 1705 aaKnown RBP24.49■■□□□ 1.51
PHGDH-230ENST00000641927 SAFB2Q14151 953 aaKnown RBP eCLIP24.49■■□□□ 1.51
PHGDH-230ENST00000641927 PRAM1Q96QH2 718 aa24.49■■□□□ 1.51
PHGDH-230ENST00000641927 DMRT2Q9Y5R5 561 aa24.47■■□□□ 1.51
PHGDH-230ENST00000641927 DLC1Q96QB1 1528 aa24.46■■□□□ 1.51
PHGDH-230ENST00000641927 KNDC1Q76NI1 1749 aa24.46■■□□□ 1.51
PHGDH-230ENST00000641927 TECPR2O15040 1411 aa24.46■■□□□ 1.51
PHGDH-230ENST00000641927 WAPLQ7Z5K2 1190 aa24.46■■□□□ 1.51
PHGDH-230ENST00000641927 KCNA6P17658 529 aa24.45■■□□□ 1.5
PHGDH-230ENST00000641927 ROBO2Q9HCK4 1378 aa24.44■■□□□ 1.5
PHGDH-230ENST00000641927 CHD2O14647 1828 aaKnown RBP24.44■■□□□ 1.5
PHGDH-230ENST00000641927 CPS1P31327 1500 aa24.44■■□□□ 1.5
PHGDH-230ENST00000641927 XRN1Q8IZH2 1706 aaKnown RBP24.43■■□□□ 1.5
PHGDH-230ENST00000641927 QRICH2Q9H0J4 1663 aa24.43■■□□□ 1.5
PHGDH-230ENST00000641927 TESK2Q96S53 571 aa24.43■■□□□ 1.5
PHGDH-230ENST00000641927 PLEKHH1Q9ULM0 1364 aa24.42■■□□□ 1.5
PHGDH-230ENST00000641927 FAM135BQ49AJ0 1406 aa24.42■■□□□ 1.5
PHGDH-230ENST00000641927 SIRT1Q96EB6 747 aa24.41■■□□□ 1.5
PHGDH-230ENST00000641927 PTCH1Q13635 1447 aa24.4■■□□□ 1.5
PHGDH-230ENST00000641927 TMF1P82094 1093 aa24.4■■□□□ 1.5
PHGDH-230ENST00000641927 MINK1Q8N4C8 1332 aaPredicted RBP24.39■■□□□ 1.5
PHGDH-230ENST00000641927 POLR3GLQ9BT43 218 aa24.37■■□□□ 1.49
PHGDH-230ENST00000641927 NWD1Q149M9 1564 aa24.37■■□□□ 1.49
PHGDH-230ENST00000641927 C11orf95C9JLR9 678 aaPredicted RBP24.37■■□□□ 1.49
PHGDH-230ENST00000641927 SLC24A1O60721 1099 aa24.37■■□□□ 1.49
PHGDH-230ENST00000641927 SBNO2Q9Y2G9 1366 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms