RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 RBM33Q96EV2 1170 aaKnown RBP17.93■□□□□ 0.46
ERGIC3-220ENST00000640748 RGS17Q9UGC6 210 aaPredicted RBP17.93■□□□□ 0.46
ERGIC3-220ENST00000640748 NWD1Q149M9 1564 aa17.92■□□□□ 0.46
ERGIC3-220ENST00000640748 ZFYVE9O95405 1425 aa17.92■□□□□ 0.46
ERGIC3-220ENST00000640748 NKTRP30414 1462 aaKnown RBP17.9■□□□□ 0.46
ERGIC3-220ENST00000640748 PROSER2Q86WR7 435 aaPredicted RBP17.9■□□□□ 0.46
ERGIC3-220ENST00000640748 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
ERGIC3-220ENST00000640748 PLEKHG1Q9ULL1 1385 aa17.87■□□□□ 0.45
ERGIC3-220ENST00000640748 UNC13BO14795 1591 aa17.87■□□□□ 0.45
ERGIC3-220ENST00000640748 ROBO1Q9Y6N7 1651 aa17.87■□□□□ 0.45
ERGIC3-220ENST00000640748 RIMS2Q9UQ26 1411 aa17.86■□□□□ 0.45
ERGIC3-220ENST00000640748 MYO5BQ9ULV0 1848 aa17.86■□□□□ 0.45
ERGIC3-220ENST00000640748 GCC2Q8IWJ2 1684 aa17.84■□□□□ 0.45
ERGIC3-220ENST00000640748 ROCK1Q13464 1354 aa17.83■□□□□ 0.45
ERGIC3-220ENST00000640748 BCANQ96GW7 911 aa17.83■□□□□ 0.44
ERGIC3-220ENST00000640748 E9PCH4 1651 aa17.82■□□□□ 0.44
ERGIC3-220ENST00000640748 CHD2O14647 1828 aaKnown RBP17.82■□□□□ 0.44
ERGIC3-220ENST00000640748 ADAMTS13Q76LX8 1427 aa17.81■□□□□ 0.44
ERGIC3-220ENST00000640748 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
ERGIC3-220ENST00000640748 MSH6P52701 1360 aa17.81■□□□□ 0.44
ERGIC3-220ENST00000640748 HRCP23327 699 aa17.81■□□□□ 0.44
ERGIC3-220ENST00000640748 SLAIN2Q9P270 581 aa17.81■□□□□ 0.44
ERGIC3-220ENST00000640748 TBX22Q9Y458 520 aa17.81■□□□□ 0.44
ERGIC3-220ENST00000640748 PPP1R15AO75807 674 aaPredicted RBP17.79■□□□□ 0.44
ERGIC3-220ENST00000640748 POTEAQ6S8J7 498 aa17.79■□□□□ 0.44
ERGIC3-220ENST00000640748 IQGAP3Q86VI3 1631 aa17.79■□□□□ 0.44
ERGIC3-220ENST00000640748 HDGFP51858 240 aaKnown RBP17.78■□□□□ 0.44
ERGIC3-220ENST00000640748 NUTM2DQ5VT03 806 aaPredicted RBP17.78■□□□□ 0.44
ERGIC3-220ENST00000640748 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
ERGIC3-220ENST00000640748 CHGAP10645 457 aaKnown RBP17.76■□□□□ 0.43
ERGIC3-220ENST00000640748 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.76■□□□□ 0.43
ERGIC3-220ENST00000640748 NUP155O75694 1391 aa17.75■□□□□ 0.43
ERGIC3-220ENST00000640748 PHLPP1O60346 1717 aa17.73■□□□□ 0.43
ERGIC3-220ENST00000640748 PIK3R4Q99570 1358 aa17.73■□□□□ 0.43
ERGIC3-220ENST00000640748 DIP2AQ14689 1571 aa17.73■□□□□ 0.43
ERGIC3-220ENST00000640748 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
ERGIC3-220ENST00000640748 COL16A1Q07092 1604 aaPredicted RBP17.72■□□□□ 0.43
ERGIC3-220ENST00000640748 JCADQ9P266 1359 aa17.72■□□□□ 0.43
ERGIC3-220ENST00000640748 ITGAEP38570 1179 aa17.7■□□□□ 0.42
ERGIC3-220ENST00000640748 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.69■□□□□ 0.42
ERGIC3-220ENST00000640748 C19orf44Q9H6X5 657 aa17.69■□□□□ 0.42
ERGIC3-220ENST00000640748 NRXN3Q9Y4C0 1643 aa17.69■□□□□ 0.42
ERGIC3-220ENST00000640748 TRPM2O94759 1503 aa17.68■□□□□ 0.42
ERGIC3-220ENST00000640748 AMOTL2Q9Y2J4 779 aa17.68■□□□□ 0.42
ERGIC3-220ENST00000640748 LRP6O75581 1613 aa17.68■□□□□ 0.42
ERGIC3-220ENST00000640748 C14orf37Q86TY3 774 aa17.67■□□□□ 0.42
ERGIC3-220ENST00000640748 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
ERGIC3-220ENST00000640748 AHDC1Q5TGY3 1603 aaPredicted RBP17.66■□□□□ 0.42
ERGIC3-220ENST00000640748 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
ERGIC3-220ENST00000640748 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
ERGIC3-220ENST00000640748 XRN1Q8IZH2 1706 aaKnown RBP17.64■□□□□ 0.41
ERGIC3-220ENST00000640748 ATF3P18847 181 aa17.64■□□□□ 0.41
ERGIC3-220ENST00000640748 METP08581 1390 aa17.64■□□□□ 0.41
ERGIC3-220ENST00000640748 SPHKAPQ2M3C7 1700 aa17.64■□□□□ 0.41
ERGIC3-220ENST00000640748 BRINP3Q76B58 766 aa17.63■□□□□ 0.41
ERGIC3-220ENST00000640748 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
ERGIC3-220ENST00000640748 DCCP43146 1447 aa17.62■□□□□ 0.41
ERGIC3-220ENST00000640748 SETD1AO15047 1707 aaKnown RBP17.61■□□□□ 0.41
ERGIC3-220ENST00000640748 CLTCL1P53675 1640 aa17.6■□□□□ 0.41
ERGIC3-220ENST00000640748 SHPRHQ149N8 1683 aa17.6■□□□□ 0.41
ERGIC3-220ENST00000640748 MST1RQ04912 1400 aa17.59■□□□□ 0.41
ERGIC3-220ENST00000640748 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
ERGIC3-220ENST00000640748 NEXMIFQ5QGS0 1516 aa17.58■□□□□ 0.41
ERGIC3-220ENST00000640748 ASXL1Q8IXJ9 1541 aa17.58■□□□□ 0.41
ERGIC3-220ENST00000640748 NAIPQ13075 1403 aa17.57■□□□□ 0.4
ERGIC3-220ENST00000640748 ZNF326Q5BKZ1 582 aaKnown RBP17.57■□□□□ 0.4
ERGIC3-220ENST00000640748 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
ERGIC3-220ENST00000640748 ADGRL3Q9HAR2 1447 aa17.55■□□□□ 0.4
ERGIC3-220ENST00000640748 MEX3CQ5U5Q3 659 aaKnown RBP17.54■□□□□ 0.4
ERGIC3-220ENST00000640748 ZNF772Q68DY9 489 aaPredicted RBP17.54■□□□□ 0.4
ERGIC3-220ENST00000640748 NHSL1Q5SYE7 1610 aa17.53■□□□□ 0.4
ERGIC3-220ENST00000640748 DDX17Q92841 729 aaKnown RBP17.52■□□□□ 0.4
ERGIC3-220ENST00000640748 NUTM2BA6NNL0 878 aaPredicted RBP17.51■□□□□ 0.39
ERGIC3-220ENST00000640748 NUTM2EB1AL46 878 aaPredicted RBP17.51■□□□□ 0.39
ERGIC3-220ENST00000640748 NUTM2AQ8IVF1 878 aaPredicted RBP17.51■□□□□ 0.39
ERGIC3-220ENST00000640748 NALCNQ8IZF0 1738 aa17.51■□□□□ 0.39
ERGIC3-220ENST00000640748 TRIM52Q96A61 297 aa17.49■□□□□ 0.39
ERGIC3-220ENST00000640748 ROBO2Q9HCK4 1378 aa17.49■□□□□ 0.39
ERGIC3-220ENST00000640748 HFM1A2PYH4 1435 aa17.48■□□□□ 0.39
ERGIC3-220ENST00000640748 PTCH1Q13635 1447 aa17.48■□□□□ 0.39
ERGIC3-220ENST00000640748 PNPLA6Q8IY17 1366 aa17.48■□□□□ 0.39
ERGIC3-220ENST00000640748 PRAG1Q86YV5 1406 aa17.47■□□□□ 0.39
ERGIC3-220ENST00000640748 UPF1Q92900 1129 aaKnown RBP eCLIP17.47■□□□□ 0.39
ERGIC3-220ENST00000640748 LRRC59Q96AG4 307 aaKnown RBP17.47■□□□□ 0.39
ERGIC3-220ENST00000640748 C1orf167Q5SNV9 1468 aa17.47■□□□□ 0.39
ERGIC3-220ENST00000640748 KIF1BO60333 1816 aa17.47■□□□□ 0.39
ERGIC3-220ENST00000640748 AFF2P51816 1311 aa17.47■□□□□ 0.39
ERGIC3-220ENST00000640748 RXRBP28702 533 aa17.46■□□□□ 0.39
ERGIC3-220ENST00000640748 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
ERGIC3-220ENST00000640748 VGFO15240 615 aaPredicted RBP17.45■□□□□ 0.38
ERGIC3-220ENST00000640748 LAMC1P11047 1609 aa17.44■□□□□ 0.38
ERGIC3-220ENST00000640748 RPGRIP1LQ68CZ1 1315 aa17.43■□□□□ 0.38
ERGIC3-220ENST00000640748 ORAI2Q96SN7 254 aa17.42■□□□□ 0.38
ERGIC3-220ENST00000640748 RAB3GAP2Q9H2M9 1393 aa17.41■□□□□ 0.38
ERGIC3-220ENST00000640748 C8orf37Q96NL8 207 aa17.41■□□□□ 0.38
ERGIC3-220ENST00000640748 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
ERGIC3-220ENST00000640748 SOS2Q07890 1332 aaPredicted RBP17.41■□□□□ 0.38
ERGIC3-220ENST00000640748 PPLO60437 1756 aa17.4■□□□□ 0.38
ERGIC3-220ENST00000640748 FOXD1Q16676 465 aa17.39■□□□□ 0.37
ERGIC3-220ENST00000640748 RGS12O14924 1447 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms