RNA–Protein interactions for RNA: ENST00000640617.1

PAX6-275, Transcript of paired box 6, humanhuman

TSL 4

Gene PAX6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-275ENST00000640617 PPP1R15AO75807 674 aaPredicted RBP34.45■■■■□ 3.11
PAX6-275ENST00000640617 UNC13BO14795 1591 aa34.44■■■■□ 3.1
PAX6-275ENST00000640617 ITGAEP38570 1179 aa34.43■■■■□ 3.1
PAX6-275ENST00000640617 ZFYVE9O95405 1425 aa34.42■■■■□ 3.1
PAX6-275ENST00000640617 RIMS2Q9UQ26 1411 aa34.42■■■■□ 3.1
PAX6-275ENST00000640617 CHGAP10645 457 aaKnown RBP34.42■■■■□ 3.1
PAX6-275ENST00000640617 FAM135BQ49AJ0 1406 aa34.41■■■■□ 3.1
PAX6-275ENST00000640617 PLEKHG1Q9ULL1 1385 aa34.41■■■■□ 3.1
PAX6-275ENST00000640617 GCC2Q8IWJ2 1684 aa34.41■■■■□ 3.1
PAX6-275ENST00000640617 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.4■■■■□ 3.1
PAX6-275ENST00000640617 RBM33Q96EV2 1170 aaKnown RBP34.4■■■■□ 3.1
PAX6-275ENST00000640617 PPARGC1BQ86YN6 1023 aaKnown RBP34.38■■■■□ 3.09
PAX6-275ENST00000640617 NUP155O75694 1391 aa34.37■■■■□ 3.09
PAX6-275ENST00000640617 NKTRP30414 1462 aaKnown RBP34.37■■■■□ 3.09
PAX6-275ENST00000640617 TMEM131LA2VDJ0 1609 aa34.36■■■■□ 3.09
PAX6-275ENST00000640617 TBX22Q9Y458 520 aa34.34■■■■□ 3.09
PAX6-275ENST00000640617 NWD1Q149M9 1564 aa34.33■■■■□ 3.09
PAX6-275ENST00000640617 MYO5BQ9ULV0 1848 aa34.32■■■■□ 3.08
PAX6-275ENST00000640617 E9PCH4 1651 aa34.31■■■■□ 3.08
PAX6-275ENST00000640617 IQGAP3Q86VI3 1631 aa34.31■■■■□ 3.08
PAX6-275ENST00000640617 MSH6P52701 1360 aa34.31■■■■□ 3.08
PAX6-275ENST00000640617 NUTM2DQ5VT03 806 aaPredicted RBP34.28■■■■□ 3.08
PAX6-275ENST00000640617 SLAIN2Q9P270 581 aa34.25■■■■□ 3.07
PAX6-275ENST00000640617 CHD2O14647 1828 aaKnown RBP34.22■■■■□ 3.07
PAX6-275ENST00000640617 ROBO1Q9Y6N7 1651 aa34.2■■■■□ 3.07
PAX6-275ENST00000640617 ADAMTS13Q76LX8 1427 aa34.19■■■■□ 3.06
PAX6-275ENST00000640617 NCOA3Q9Y6Q9 1424 aa34.19■■■■□ 3.06
PAX6-275ENST00000640617 C14orf37Q86TY3 774 aa34.17■■■■□ 3.06
PAX6-275ENST00000640617 PIK3R4Q99570 1358 aa34.17■■■■□ 3.06
PAX6-275ENST00000640617 DIP2AQ14689 1571 aa34.15■■■■□ 3.06
PAX6-275ENST00000640617 RGS17Q9UGC6 210 aaPredicted RBP34.14■■■■□ 3.06
PAX6-275ENST00000640617 C19orf44Q9H6X5 657 aa34.1■■■■□ 3.05
PAX6-275ENST00000640617 ZNF326Q5BKZ1 582 aaKnown RBP34.09■■■■□ 3.05
PAX6-275ENST00000640617 AMOTL2Q9Y2J4 779 aa34.09■■■■□ 3.05
PAX6-275ENST00000640617 CADPS2Q86UW7 1296 aa34.08■■■■□ 3.05
PAX6-275ENST00000640617 RRBP1Q9P2E9 1410 aaKnown RBP34.07■■■■□ 3.04
PAX6-275ENST00000640617 ATF3P18847 181 aa34.07■■■■□ 3.04
PAX6-275ENST00000640617 TRPM2O94759 1503 aa34.06■■■■□ 3.04
PAX6-275ENST00000640617 SPHKAPQ2M3C7 1700 aa34.02■■■■□ 3.04
PAX6-275ENST00000640617 JCADQ9P266 1359 aa34.02■■■■□ 3.04
PAX6-275ENST00000640617 PHLPP1O60346 1717 aa34.01■■■■□ 3.03
PAX6-275ENST00000640617 PTPRUQ92729 1446 aa34■■■■□ 3.03
PAX6-275ENST00000640617 NAIPQ13075 1403 aa33.99■■■■□ 3.03
PAX6-275ENST00000640617 POTEAQ6S8J7 498 aa33.96■■■■□ 3.03
PAX6-275ENST00000640617 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.96■■■■□ 3.03
PAX6-275ENST00000640617 SETBP1Q9Y6X0 1596 aa33.95■■■■□ 3.03
PAX6-275ENST00000640617 TRIM52Q96A61 297 aa33.94■■■■□ 3.02
PAX6-275ENST00000640617 NRXN3Q9Y4C0 1643 aa33.9■■■■□ 3.02
PAX6-275ENST00000640617 METP08581 1390 aa33.9■■■■□ 3.02
PAX6-275ENST00000640617 COL16A1Q07092 1604 aaPredicted RBP33.89■■■■□ 3.02
PAX6-275ENST00000640617 CLTCL1P53675 1640 aa33.88■■■■□ 3.01
PAX6-275ENST00000640617 DCCP43146 1447 aa33.87■■■■□ 3.01
PAX6-275ENST00000640617 SPATA31A6Q5VVP1 1343 aa33.87■■■■□ 3.01
PAX6-275ENST00000640617 BRINP3Q76B58 766 aa33.87■■■■□ 3.01
PAX6-275ENST00000640617 HFM1A2PYH4 1435 aa33.85■■■■□ 3.01
PAX6-275ENST00000640617 XRN1Q8IZH2 1706 aaKnown RBP33.84■■■■□ 3.01
PAX6-275ENST00000640617 NEXMIFQ5QGS0 1516 aa33.84■■■■□ 3.01
PAX6-275ENST00000640617 AHDC1Q5TGY3 1603 aaPredicted RBP33.83■■■■□ 3.01
PAX6-275ENST00000640617 VGFO15240 615 aaPredicted RBP33.83■■■■□ 3.01
PAX6-275ENST00000640617 SLC4A1APQ9BWU0 796 aaKnown RBP33.83■■■■□ 3.01
PAX6-275ENST00000640617 MEX3CQ5U5Q3 659 aaKnown RBP33.81■■■■□ 3
PAX6-275ENST00000640617 KIF1BO60333 1816 aa33.8■■■■□ 3
PAX6-275ENST00000640617 RPGRIP1LQ68CZ1 1315 aa33.78■■■■□ 3
PAX6-275ENST00000640617 MST1RQ04912 1400 aa33.75■■■□□ 2.99
PAX6-275ENST00000640617 ADGRL3Q9HAR2 1447 aa33.73■■■□□ 2.99
PAX6-275ENST00000640617 LRP6O75581 1613 aa33.73■■■□□ 2.99
PAX6-275ENST00000640617 ZNF772Q68DY9 489 aaPredicted RBP33.72■■■□□ 2.99
PAX6-275ENST00000640617 ASXL1Q8IXJ9 1541 aa33.72■■■□□ 2.99
PAX6-275ENST00000640617 SHPRHQ149N8 1683 aa33.7■■■□□ 2.99
PAX6-275ENST00000640617 NUTM2BA6NNL0 878 aaPredicted RBP33.68■■■□□ 2.98
PAX6-275ENST00000640617 NUTM2EB1AL46 878 aaPredicted RBP33.68■■■□□ 2.98
PAX6-275ENST00000640617 NUTM2AQ8IVF1 878 aaPredicted RBP33.68■■■□□ 2.98
PAX6-275ENST00000640617 LRRC59Q96AG4 307 aaKnown RBP33.68■■■□□ 2.98
PAX6-275ENST00000640617 SETD5Q9C0A6 1442 aa33.66■■■□□ 2.98
PAX6-275ENST00000640617 PTCH1Q13635 1447 aa33.63■■■□□ 2.97
PAX6-275ENST00000640617 FOXD1Q16676 465 aa33.63■■■□□ 2.97
PAX6-275ENST00000640617 ROBO2Q9HCK4 1378 aa33.61■■■□□ 2.97
PAX6-275ENST00000640617 DDX17Q92841 729 aaKnown RBP33.6■■■□□ 2.97
PAX6-275ENST00000640617 NALCNQ8IZF0 1738 aa33.59■■■□□ 2.97
PAX6-275ENST00000640617 NHSL1Q5SYE7 1610 aa33.59■■■□□ 2.97
PAX6-275ENST00000640617 C1orf167Q5SNV9 1468 aa33.58■■■□□ 2.97
PAX6-275ENST00000640617 MPHOSPH9Q99550 1183 aa33.56■■■□□ 2.96
PAX6-275ENST00000640617 CCDC144AA2RUR9 1427 aa33.55■■■□□ 2.96
PAX6-275ENST00000640617 PRAG1Q86YV5 1406 aa33.55■■■□□ 2.96
PAX6-275ENST00000640617 SETD1AO15047 1707 aaKnown RBP33.55■■■□□ 2.96
PAX6-275ENST00000640617 RXRBP28702 533 aa33.54■■■□□ 2.96
PAX6-275ENST00000640617 PPLO60437 1756 aa33.54■■■□□ 2.96
PAX6-275ENST00000640617 RGL3Q3MIN7 710 aa33.53■■■□□ 2.96
PAX6-275ENST00000640617 AFF2P51816 1311 aa33.52■■■□□ 2.96
PAX6-275ENST00000640617 PNPLA6Q8IY17 1366 aa33.51■■■□□ 2.96
PAX6-275ENST00000640617 ORAI2Q96SN7 254 aa33.51■■■□□ 2.95
PAX6-275ENST00000640617 ADGRF5Q8IZF2 1346 aa33.5■■■□□ 2.95
PAX6-275ENST00000640617 C8orf37Q96NL8 207 aa33.47■■■□□ 2.95
PAX6-275ENST00000640617 ACIN1Q9UKV3 1341 aaKnown RBP33.47■■■□□ 2.95
PAX6-275ENST00000640617 ANKRD30BQ9BXX2 1392 aa33.47■■■□□ 2.95
PAX6-275ENST00000640617 SOS2Q07890 1332 aaPredicted RBP33.45■■■□□ 2.95
PAX6-275ENST00000640617 SPATA31E1Q6ZUB1 1445 aa33.45■■■□□ 2.94
PAX6-275ENST00000640617 STK26Q9P289 416 aa33.43■■■□□ 2.94
PAX6-275ENST00000640617 LAMC1P11047 1609 aa33.4■■■□□ 2.94
PAX6-275ENST00000640617 QTRT2Q9H974 415 aaKnown RBP33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms