RNA–Protein interactions for RNA: ENST00000640476.1

CROCCP2-207, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 1,750 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-207ENST00000640476 KDM5AP29375 1690 aaKnown RBP29.07■■■□□ 2.24
CROCCP2-207ENST00000640476 ZEB1P37275 1124 aaPredicted RBP29.07■■■□□ 2.24
CROCCP2-207ENST00000640476 TIMELESSQ9UNS1 1208 aa29.06■■■□□ 2.24
CROCCP2-207ENST00000640476 UHRF1BP1Q6BDS2 1440 aa29.06■■■□□ 2.24
CROCCP2-207ENST00000640476 RIMS2Q9UQ26 1411 aa29.03■■■□□ 2.24
CROCCP2-207ENST00000640476 ZFYVE9O95405 1425 aa29.02■■■□□ 2.24
CROCCP2-207ENST00000640476 TMEM2Q9UHN6 1383 aa29.02■■■□□ 2.24
CROCCP2-207ENST00000640476 LTKP29376 864 aa29.02■■■□□ 2.24
CROCCP2-207ENST00000640476 HSPA2P54652 639 aa29■■■□□ 2.23
CROCCP2-207ENST00000640476 THEMISQ8N1K5 641 aaPredicted RBP29■■■□□ 2.23
CROCCP2-207ENST00000640476 PRAG1Q86YV5 1406 aa28.98■■■□□ 2.23
CROCCP2-207ENST00000640476 RPGRIP1LQ68CZ1 1315 aa28.98■■■□□ 2.23
CROCCP2-207ENST00000640476 LMTK3Q96Q04 1460 aa28.97■■■□□ 2.23
CROCCP2-207ENST00000640476 MYOM2P54296 1465 aa28.95■■■□□ 2.22
CROCCP2-207ENST00000640476 ARHGAP23Q9P227 1491 aa28.95■■■□□ 2.22
CROCCP2-207ENST00000640476 SLIT1O75093 1534 aa28.95■■■□□ 2.22
CROCCP2-207ENST00000640476 TXNDC2Q86VQ3 553 aa28.94■■■□□ 2.22
CROCCP2-207ENST00000640476 VGFO15240 615 aaPredicted RBP28.92■■■□□ 2.22
CROCCP2-207ENST00000640476 NBPF1Q3BBV0 1214 aa28.92■■■□□ 2.22
CROCCP2-207ENST00000640476 NRXN1Q9ULB1 1477 aa28.92■■■□□ 2.22
CROCCP2-207ENST00000640476 CFAP70Q5T0N1 1121 aa28.91■■■□□ 2.22
CROCCP2-207ENST00000640476 TRPM1Q7Z4N2 1603 aa28.9■■■□□ 2.22
CROCCP2-207ENST00000640476 PIK3C2GO75747 1445 aa28.9■■■□□ 2.22
CROCCP2-207ENST00000640476 IQGAP1P46940 1657 aa28.88■■■□□ 2.21
CROCCP2-207ENST00000640476 NRXN3Q9Y4C0 1643 aa28.87■■■□□ 2.21
CROCCP2-207ENST00000640476 NCKAP5LQ9HCH0 1330 aa28.87■■■□□ 2.21
CROCCP2-207ENST00000640476 EID1Q9Y6B2 187 aa28.85■■■□□ 2.21
CROCCP2-207ENST00000640476 SCAF11Q99590 1463 aaKnown RBP28.85■■■□□ 2.21
CROCCP2-207ENST00000640476 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.85■■■□□ 2.21
CROCCP2-207ENST00000640476 TMEM132EQ6IEE7 984 aa28.83■■■□□ 2.21
CROCCP2-207ENST00000640476 BCANQ96GW7 911 aa28.83■■■□□ 2.21
CROCCP2-207ENST00000640476 POLR1AO95602 1720 aaPredicted RBP28.82■■■□□ 2.2
CROCCP2-207ENST00000640476 ANKLE2Q86XL3 938 aa28.82■■■□□ 2.2
CROCCP2-207ENST00000640476 STAC3Q96MF2 364 aa28.82■■■□□ 2.2
CROCCP2-207ENST00000640476 SLC26A8Q96RN1 970 aa28.81■■■□□ 2.2
CROCCP2-207ENST00000640476 RALGAPBQ86X10 1494 aa28.8■■■□□ 2.2
CROCCP2-207ENST00000640476 ALKQ9UM73 1620 aa28.8■■■□□ 2.2
CROCCP2-207ENST00000640476 SETD1AO15047 1707 aaKnown RBP28.8■■■□□ 2.2
CROCCP2-207ENST00000640476 HDGFP51858 240 aaKnown RBP28.8■■■□□ 2.2
CROCCP2-207ENST00000640476 C14orf93Q9H972 538 aaKnown RBP28.8■■■□□ 2.2
CROCCP2-207ENST00000640476 STRCQ7RTU9 1775 aa28.79■■■□□ 2.2
CROCCP2-207ENST00000640476 ROCK2O75116 1388 aaKnown RBP28.78■■■□□ 2.2
CROCCP2-207ENST00000640476 PLEKHG1Q9ULL1 1385 aa28.78■■■□□ 2.2
CROCCP2-207ENST00000640476 ADAMTS13Q76LX8 1427 aa28.77■■■□□ 2.2
CROCCP2-207ENST00000640476 ASXL1Q8IXJ9 1541 aa28.77■■■□□ 2.2
CROCCP2-207ENST00000640476 SETBP1Q9Y6X0 1596 aa28.77■■■□□ 2.2
CROCCP2-207ENST00000640476 KIAA1210Q9ULL0 1709 aa28.77■■■□□ 2.2
CROCCP2-207ENST00000640476 HIRIP3Q9BW71 556 aaPredicted RBP28.76■■■□□ 2.19
CROCCP2-207ENST00000640476 METP08581 1390 aa28.73■■■□□ 2.19
CROCCP2-207ENST00000640476 CARD11Q9BXL7 1154 aa28.73■■■□□ 2.19
CROCCP2-207ENST00000640476 ADGRB1O14514 1584 aa28.73■■■□□ 2.19
CROCCP2-207ENST00000640476 LAMC1P11047 1609 aa28.7■■■□□ 2.18
CROCCP2-207ENST00000640476 NPHP4O75161 1426 aaPredicted RBP28.7■■■□□ 2.18
CROCCP2-207ENST00000640476 MED14O60244 1454 aa28.69■■■□□ 2.18
CROCCP2-207ENST00000640476 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
CROCCP2-207ENST00000640476 STK26Q9P289 416 aa28.68■■■□□ 2.18
CROCCP2-207ENST00000640476 GPRASP1Q5JY77 1395 aa28.68■■■□□ 2.18
CROCCP2-207ENST00000640476 TRAK1Q9UPV9 953 aa28.65■■■□□ 2.18
CROCCP2-207ENST00000640476 PTPRUQ92729 1446 aa28.63■■■□□ 2.17
CROCCP2-207ENST00000640476 USP47Q96K76 1375 aa28.62■■■□□ 2.17
CROCCP2-207ENST00000640476 HSPA5P11021 654 aaKnown RBP28.62■■■□□ 2.17
CROCCP2-207ENST00000640476 TBX22Q9Y458 520 aa28.61■■■□□ 2.17
CROCCP2-207ENST00000640476 YTHDC2Q9H6S0 1430 aaKnown RBP28.6■■■□□ 2.17
CROCCP2-207ENST00000640476 ST20-MTHFSA0A0A6YYL1 179 aa28.57■■■□□ 2.16
CROCCP2-207ENST00000640476 ARHGEF28Q8N1W1 1705 aaKnown RBP28.56■■■□□ 2.16
CROCCP2-207ENST00000640476 DIP2AQ14689 1571 aa28.56■■■□□ 2.16
CROCCP2-207ENST00000640476 EIF4G2P78344 907 aaKnown RBP eCLIP28.56■■■□□ 2.16
CROCCP2-207ENST00000640476 CHD2O14647 1828 aaKnown RBP28.56■■■□□ 2.16
CROCCP2-207ENST00000640476 SAFB2Q14151 953 aaKnown RBP eCLIP28.55■■■□□ 2.16
CROCCP2-207ENST00000640476 AMOTL2Q9Y2J4 779 aa28.53■■■□□ 2.16
CROCCP2-207ENST00000640476 WAPLQ7Z5K2 1190 aa28.52■■■□□ 2.16
CROCCP2-207ENST00000640476 STRCP1A6NGW2 1772 aa28.52■■■□□ 2.16
CROCCP2-207ENST00000640476 LRPPRCP42704 1394 aaKnown RBP28.52■■■□□ 2.16
CROCCP2-207ENST00000640476 PLEKHH1Q9ULM0 1364 aa28.51■■■□□ 2.15
CROCCP2-207ENST00000640476 KCNA6P17658 529 aa28.5■■■□□ 2.15
CROCCP2-207ENST00000640476 RBM33Q96EV2 1170 aaKnown RBP28.5■■■□□ 2.15
CROCCP2-207ENST00000640476 ROBO2Q9HCK4 1378 aa28.49■■■□□ 2.15
CROCCP2-207ENST00000640476 XRN1Q8IZH2 1706 aaKnown RBP28.48■■■□□ 2.15
CROCCP2-207ENST00000640476 PRAM1Q96QH2 718 aa28.48■■■□□ 2.15
CROCCP2-207ENST00000640476 ABCC11Q96J66 1382 aa28.47■■■□□ 2.15
CROCCP2-207ENST00000640476 KNDC1Q76NI1 1749 aa28.47■■■□□ 2.15
CROCCP2-207ENST00000640476 C11orf95C9JLR9 678 aaPredicted RBP28.46■■■□□ 2.15
CROCCP2-207ENST00000640476 QRICH2Q9H0J4 1663 aa28.45■■■□□ 2.15
CROCCP2-207ENST00000640476 TESK2Q96S53 571 aa28.45■■■□□ 2.14
CROCCP2-207ENST00000640476 CPS1P31327 1500 aa28.42■■■□□ 2.14
CROCCP2-207ENST00000640476 ZNF335Q9H4Z2 1342 aaPredicted RBP28.42■■■□□ 2.14
CROCCP2-207ENST00000640476 CENPJQ9HC77 1338 aaPredicted RBP28.42■■■□□ 2.14
CROCCP2-207ENST00000640476 PIK3R4Q99570 1358 aa28.42■■■□□ 2.14
CROCCP2-207ENST00000640476 TECPR2O15040 1411 aa28.42■■■□□ 2.14
CROCCP2-207ENST00000640476 POGKQ9P215 609 aa28.41■■■□□ 2.14
CROCCP2-207ENST00000640476 DLC1Q96QB1 1528 aa28.4■■■□□ 2.14
CROCCP2-207ENST00000640476 EIF3AQ14152 1382 aaKnown RBP28.39■■■□□ 2.14
CROCCP2-207ENST00000640476 MINK1Q8N4C8 1332 aaPredicted RBP28.39■■■□□ 2.13
CROCCP2-207ENST00000640476 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.38■■■□□ 2.13
CROCCP2-207ENST00000640476 NWD1Q149M9 1564 aa28.38■■■□□ 2.13
CROCCP2-207ENST00000640476 ZNF316A6NFI3 1004 aaPredicted RBP28.37■■■□□ 2.13
CROCCP2-207ENST00000640476 DISP3Q9P2K9 1392 aa28.36■■■□□ 2.13
CROCCP2-207ENST00000640476 DMRT2Q9Y5R5 561 aa28.34■■■□□ 2.13
CROCCP2-207ENST00000640476 PTCH1Q13635 1447 aa28.34■■■□□ 2.13
CROCCP2-207ENST00000640476 FAM135BQ49AJ0 1406 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms