RNA–Protein interactions for RNA: ENST00000640410.1

SETD1A-203, Transcript of SET domain containing 1A, humanhuman

TSL 3

Gene SETD1A, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-203ENST00000640410 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
SETD1A-203ENST00000640410 XIRP1Q702N8 1843 aaKnown RBP24.77■■□□□ 1.56
SETD1A-203ENST00000640410 CHGAP10645 457 aaKnown RBP24.76■■□□□ 1.55
SETD1A-203ENST00000640410 KCNA6P17658 529 aa24.74■■□□□ 1.55
SETD1A-203ENST00000640410 SENP3Q9H4L4 574 aaPredicted RBP24.74■■□□□ 1.55
SETD1A-203ENST00000640410 PLEKHG1Q9ULL1 1385 aa24.74■■□□□ 1.55
SETD1A-203ENST00000640410 NAIPQ13075 1403 aa24.74■■□□□ 1.55
SETD1A-203ENST00000640410 BCANQ96GW7 911 aa24.73■■□□□ 1.55
SETD1A-203ENST00000640410 NWD1Q149M9 1564 aa24.71■■□□□ 1.55
SETD1A-203ENST00000640410 TMEM94Q12767 1356 aa24.71■■□□□ 1.55
SETD1A-203ENST00000640410 PPP1R15AO75807 674 aaPredicted RBP24.71■■□□□ 1.55
SETD1A-203ENST00000640410 HDGFP51858 240 aaKnown RBP24.69■■□□□ 1.54
SETD1A-203ENST00000640410 ILDR2Q71H61 639 aa24.69■■□□□ 1.54
SETD1A-203ENST00000640410 SPHKAPQ2M3C7 1700 aa24.69■■□□□ 1.54
SETD1A-203ENST00000640410 NUTM2DQ5VT03 806 aaPredicted RBP24.68■■□□□ 1.54
SETD1A-203ENST00000640410 NKTRP30414 1462 aaKnown RBP24.68■■□□□ 1.54
SETD1A-203ENST00000640410 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.67■■□□□ 1.54
SETD1A-203ENST00000640410 HFM1A2PYH4 1435 aa24.65■■□□□ 1.54
SETD1A-203ENST00000640410 PROSER2Q86WR7 435 aaPredicted RBP24.65■■□□□ 1.54
SETD1A-203ENST00000640410 RBM33Q96EV2 1170 aaKnown RBP24.65■■□□□ 1.54
SETD1A-203ENST00000640410 ADAMTS13Q76LX8 1427 aa24.64■■□□□ 1.54
SETD1A-203ENST00000640410 CHD2O14647 1828 aaKnown RBP24.63■■□□□ 1.53
SETD1A-203ENST00000640410 TBX22Q9Y458 520 aa24.62■■□□□ 1.53
SETD1A-203ENST00000640410 MED1Q15648 1581 aaPredicted RBP24.6■■□□□ 1.53
SETD1A-203ENST00000640410 CLTCL1P53675 1640 aa24.59■■□□□ 1.53
SETD1A-203ENST00000640410 TRPM2O94759 1503 aa24.59■■□□□ 1.53
SETD1A-203ENST00000640410 DIP2AQ14689 1571 aa24.59■■□□□ 1.53
SETD1A-203ENST00000640410 TRIM52Q96A61 297 aa24.56■■□□□ 1.52
SETD1A-203ENST00000640410 FAM135BQ49AJ0 1406 aa24.55■■□□□ 1.52
SETD1A-203ENST00000640410 MSH6P52701 1360 aa24.54■■□□□ 1.52
SETD1A-203ENST00000640410 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
SETD1A-203ENST00000640410 ZNF326Q5BKZ1 582 aaKnown RBP24.53■■□□□ 1.52
SETD1A-203ENST00000640410 NRXN3Q9Y4C0 1643 aa24.53■■□□□ 1.52
SETD1A-203ENST00000640410 PTPRUQ92729 1446 aa24.51■■□□□ 1.51
SETD1A-203ENST00000640410 SETBP1Q9Y6X0 1596 aa24.5■■□□□ 1.51
SETD1A-203ENST00000640410 NEXMIFQ5QGS0 1516 aa24.5■■□□□ 1.51
SETD1A-203ENST00000640410 ROBO1Q9Y6N7 1651 aa24.5■■□□□ 1.51
SETD1A-203ENST00000640410 SLC4A1APQ9BWU0 796 aaKnown RBP24.49■■□□□ 1.51
SETD1A-203ENST00000640410 KIF1BO60333 1816 aa24.48■■□□□ 1.51
SETD1A-203ENST00000640410 NCOA3Q9Y6Q9 1424 aa24.47■■□□□ 1.51
SETD1A-203ENST00000640410 SOCS7O14512 581 aa24.46■■□□□ 1.51
SETD1A-203ENST00000640410 AMOTL2Q9Y2J4 779 aa24.46■■□□□ 1.51
SETD1A-203ENST00000640410 XRN1Q8IZH2 1706 aaKnown RBP24.44■■□□□ 1.5
SETD1A-203ENST00000640410 C14orf37Q86TY3 774 aa24.43■■□□□ 1.5
SETD1A-203ENST00000640410 SLAIN2Q9P270 581 aa24.43■■□□□ 1.5
SETD1A-203ENST00000640410 METP08581 1390 aa24.42■■□□□ 1.5
SETD1A-203ENST00000640410 FOXD1Q16676 465 aa24.41■■□□□ 1.5
SETD1A-203ENST00000640410 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.41■■□□□ 1.5
SETD1A-203ENST00000640410 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
SETD1A-203ENST00000640410 C19orf44Q9H6X5 657 aa24.38■■□□□ 1.49
SETD1A-203ENST00000640410 CADPS2Q86UW7 1296 aa24.35■■□□□ 1.49
SETD1A-203ENST00000640410 ATF3P18847 181 aa24.34■■□□□ 1.49
SETD1A-203ENST00000640410 MPHOSPH9Q99550 1183 aa24.34■■□□□ 1.49
SETD1A-203ENST00000640410 PHLPP1O60346 1717 aa24.34■■□□□ 1.49
SETD1A-203ENST00000640410 RPGRIP1LQ68CZ1 1315 aa24.33■■□□□ 1.48
SETD1A-203ENST00000640410 SETD1AO15047 1707 aaKnown RBP24.32■■□□□ 1.48
SETD1A-203ENST00000640410 PPLO60437 1756 aa24.32■■□□□ 1.48
SETD1A-203ENST00000640410 VGFO15240 615 aaPredicted RBP24.32■■□□□ 1.48
SETD1A-203ENST00000640410 DCCP43146 1447 aa24.31■■□□□ 1.48
SETD1A-203ENST00000640410 CCDC144AA2RUR9 1427 aa24.3■■□□□ 1.48
SETD1A-203ENST00000640410 COL16A1Q07092 1604 aaPredicted RBP24.3■■□□□ 1.48
SETD1A-203ENST00000640410 SETD5Q9C0A6 1442 aa24.29■■□□□ 1.48
SETD1A-203ENST00000640410 RGS17Q9UGC6 210 aaPredicted RBP24.27■■□□□ 1.48
SETD1A-203ENST00000640410 AHDC1Q5TGY3 1603 aaPredicted RBP24.27■■□□□ 1.48
SETD1A-203ENST00000640410 JCADQ9P266 1359 aa24.27■■□□□ 1.48
SETD1A-203ENST00000640410 SPATA31E1Q6ZUB1 1445 aa24.27■■□□□ 1.48
SETD1A-203ENST00000640410 ADGRL3Q9HAR2 1447 aa24.27■■□□□ 1.48
SETD1A-203ENST00000640410 MST1RQ04912 1400 aa24.26■■□□□ 1.47
SETD1A-203ENST00000640410 NALCNQ8IZF0 1738 aa24.25■■□□□ 1.47
SETD1A-203ENST00000640410 PTCH1Q13635 1447 aa24.25■■□□□ 1.47
SETD1A-203ENST00000640410 BRINP3Q76B58 766 aa24.24■■□□□ 1.47
SETD1A-203ENST00000640410 RGL3Q3MIN7 710 aa24.23■■□□□ 1.47
SETD1A-203ENST00000640410 ROBO2Q9HCK4 1378 aa24.23■■□□□ 1.47
SETD1A-203ENST00000640410 PRAG1Q86YV5 1406 aa24.22■■□□□ 1.47
SETD1A-203ENST00000640410 RAB3GAP2Q9H2M9 1393 aa24.22■■□□□ 1.47
SETD1A-203ENST00000640410 ADGRF5Q8IZF2 1346 aa24.22■■□□□ 1.47
SETD1A-203ENST00000640410 ASXL1Q8IXJ9 1541 aa24.21■■□□□ 1.47
SETD1A-203ENST00000640410 IFT172Q9UG01 1749 aa24.21■■□□□ 1.47
SETD1A-203ENST00000640410 ACIN1Q9UKV3 1341 aaKnown RBP24.2■■□□□ 1.46
SETD1A-203ENST00000640410 ANKRD30BQ9BXX2 1392 aa24.17■■□□□ 1.46
SETD1A-203ENST00000640410 LRP6O75581 1613 aa24.15■■□□□ 1.46
SETD1A-203ENST00000640410 NHSL1Q5SYE7 1610 aa24.15■■□□□ 1.46
SETD1A-203ENST00000640410 SHPRHQ149N8 1683 aa24.15■■□□□ 1.46
SETD1A-203ENST00000640410 POTEAQ6S8J7 498 aa24.13■■□□□ 1.45
SETD1A-203ENST00000640410 C1orf167Q5SNV9 1468 aa24.13■■□□□ 1.45
SETD1A-203ENST00000640410 SPATA31A6Q5VVP1 1343 aa24.12■■□□□ 1.45
SETD1A-203ENST00000640410 PIK3C2GO75747 1445 aa24.12■■□□□ 1.45
SETD1A-203ENST00000640410 DDX17Q92841 729 aaKnown RBP24.1■■□□□ 1.45
SETD1A-203ENST00000640410 LRPPRCP42704 1394 aaKnown RBP24.09■■□□□ 1.45
SETD1A-203ENST00000640410 TECPR2O15040 1411 aa24.09■■□□□ 1.45
SETD1A-203ENST00000640410 TMEM132EQ6IEE7 984 aa24.07■■□□□ 1.44
SETD1A-203ENST00000640410 STK26Q9P289 416 aa24.07■■□□□ 1.44
SETD1A-203ENST00000640410 KNDC1Q76NI1 1749 aa24.05■■□□□ 1.44
SETD1A-203ENST00000640410 TRIM26Q12899 539 aaPredicted RBP24.05■■□□□ 1.44
SETD1A-203ENST00000640410 MYOM2P54296 1465 aa24.05■■□□□ 1.44
SETD1A-203ENST00000640410 NRXN1Q9ULB1 1477 aa24.05■■□□□ 1.44
SETD1A-203ENST00000640410 ABCC11Q96J66 1382 aa24.04■■□□□ 1.44
SETD1A-203ENST00000640410 CDC42BPGQ6DT37 1551 aa24.04■■□□□ 1.44
SETD1A-203ENST00000640410 MEX3CQ5U5Q3 659 aaKnown RBP24.04■■□□□ 1.44
SETD1A-203ENST00000640410 ORAI2Q96SN7 254 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms