RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 SSTR3P32745 418 aaPredicted RBP12.21□□□□□ -0.45
RTTN-217ENST00000640393 SWT1Q5T5J6 900 aaKnown RBP12.21□□□□□ -0.45
RTTN-217ENST00000640393 RNF40O75150 1001 aa12.2□□□□□ -0.46
RTTN-217ENST00000640393 DAXXQ9UER7 740 aaPredicted RBP12.2□□□□□ -0.46
RTTN-217ENST00000640393 DDX11L8A8MPP1 907 aa12.19□□□□□ -0.46
RTTN-217ENST00000640393 SAMD7Q7Z3H4 446 aa12.19□□□□□ -0.46
RTTN-217ENST00000640393 ZFRQ96KR1 1074 aaKnown RBP12.19□□□□□ -0.46
RTTN-217ENST00000640393 TMEM134Q9H6X4 195 aa12.19□□□□□ -0.46
RTTN-217ENST00000640393 MS4A1P11836 297 aa12.18□□□□□ -0.46
RTTN-217ENST00000640393 LAPTM4BQ86VI4 370 aa12.18□□□□□ -0.46
RTTN-217ENST00000640393 TMUB1Q9BVT8 246 aa12.18□□□□□ -0.46
RTTN-217ENST00000640393 FAM117AQ9C073 453 aa12.18□□□□□ -0.46
RTTN-217ENST00000640393 RDH13Q8NBN7 331 aa12.16□□□□□ -0.46
RTTN-217ENST00000640393 FAM217BQ9NTX9 383 aaPredicted RBP12.16□□□□□ -0.46
RTTN-217ENST00000640393 WNT2BQ93097 391 aa12.13□□□□□ -0.47
RTTN-217ENST00000640393 BEGAINQ9BUH8 593 aa12.12□□□□□ -0.47
RTTN-217ENST00000640393 ANKK1Q8NFD2 765 aa12.11□□□□□ -0.47
RTTN-217ENST00000640393 LRCH3Q96II8 777 aa12.11□□□□□ -0.47
RTTN-217ENST00000640393 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
RTTN-217ENST00000640393 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
RTTN-217ENST00000640393 BCAMP50895 628 aa12.1□□□□□ -0.47
RTTN-217ENST00000640393 SULF1Q8IWU6 871 aa12.1□□□□□ -0.47
RTTN-217ENST00000640393 KCTD12Q96CX2 325 aaKnown RBP12.1□□□□□ -0.47
RTTN-217ENST00000640393 SLC10A3P09131 477 aa12.08□□□□□ -0.48
RTTN-217ENST00000640393 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
RTTN-217ENST00000640393 SLF2Q8IX21 1173 aa12.08□□□□□ -0.48
RTTN-217ENST00000640393 DDRGK1Q96HY6 314 aa12.07□□□□□ -0.48
RTTN-217ENST00000640393 ATP1B4Q9UN42 357 aaPredicted RBP12.07□□□□□ -0.48
RTTN-217ENST00000640393 PLEKHG3A1L390 1219 aa12.05□□□□□ -0.48
RTTN-217ENST00000640393 CD46P15529 392 aa12.05□□□□□ -0.48
RTTN-217ENST00000640393 HPS5Q9UPZ3 1129 aa12.05□□□□□ -0.48
RTTN-217ENST00000640393 PPP4CP60510 307 aa12.05□□□□□ -0.48
RTTN-217ENST00000640393 SOWAHBA6NEL2 793 aa12.04□□□□□ -0.48
RTTN-217ENST00000640393 NUTM1Q86Y26 1132 aa12.04□□□□□ -0.48
RTTN-217ENST00000640393 PTPN5P54829 565 aa12.03□□□□□ -0.48
RTTN-217ENST00000640393 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
RTTN-217ENST00000640393 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
RTTN-217ENST00000640393 CFHP08603 1231 aa12.01□□□□□ -0.49
RTTN-217ENST00000640393 POLR3EQ9NVU0 708 aa12.01□□□□□ -0.49
RTTN-217ENST00000640393 PCDH10Q9P2E7 1040 aa12.01□□□□□ -0.49
RTTN-217ENST00000640393 GCGRP47871 477 aa12□□□□□ -0.49
RTTN-217ENST00000640393 TBC1D2Q9BYX2 928 aa12□□□□□ -0.49
RTTN-217ENST00000640393 THSD4Q6ZMP0 1018 aa11.99□□□□□ -0.49
RTTN-217ENST00000640393 SPIRE2Q8WWL2 714 aa11.99□□□□□ -0.49
RTTN-217ENST00000640393 WBP1LQ9NX94 342 aa11.99□□□□□ -0.49
RTTN-217ENST00000640393 TSR3Q9UJK0 312 aaKnown RBP11.99□□□□□ -0.49
RTTN-217ENST00000640393 SPNS2Q8IVW8 549 aa11.98□□□□□ -0.49
RTTN-217ENST00000640393 KDM4AO75164 1064 aa11.97□□□□□ -0.49
RTTN-217ENST00000640393 NDUFV2P19404 249 aa11.95□□□□□ -0.5
RTTN-217ENST00000640393 KMT5BQ4FZB7 885 aa11.95□□□□□ -0.5
RTTN-217ENST00000640393 FUT2Q10981 343 aa11.94□□□□□ -0.5
RTTN-217ENST00000640393 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
RTTN-217ENST00000640393 APLP1P51693 650 aa11.93□□□□□ -0.5
RTTN-217ENST00000640393 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
RTTN-217ENST00000640393 PUS10Q3MIT2 529 aaKnown RBP11.93□□□□□ -0.5
RTTN-217ENST00000640393 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
RTTN-217ENST00000640393 MOXD2PA6NHM9 499 aa11.92□□□□□ -0.5
RTTN-217ENST00000640393 PROCA1Q8NCQ7 364 aaPredicted RBP11.92□□□□□ -0.5
RTTN-217ENST00000640393 HLA-CQ95604 372 aa11.92□□□□□ -0.5
RTTN-217ENST00000640393 GUCA2AQ02747 115 aa11.92□□□□□ -0.5
RTTN-217ENST00000640393 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
RTTN-217ENST00000640393 NECTIN2Q92692 538 aa11.92□□□□□ -0.5
RTTN-217ENST00000640393 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
RTTN-217ENST00000640393 RNF166Q96A37 237 aaPredicted RBP11.91□□□□□ -0.5
RTTN-217ENST00000640393 SKIV2LQ15477 1246 aaKnown RBP11.9□□□□□ -0.5
RTTN-217ENST00000640393 PCMTD1Q96MG8 357 aaPredicted RBP11.9□□□□□ -0.5
RTTN-217ENST00000640393 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
RTTN-217ENST00000640393 SH3D19Q5HYK7 790 aa11.89□□□□□ -0.51
RTTN-217ENST00000640393 ACTN4O43707 911 aaKnown RBP11.88□□□□□ -0.51
RTTN-217ENST00000640393 LIMD1Q9UGP4 676 aa11.88□□□□□ -0.51
RTTN-217ENST00000640393 HOXA2O43364 376 aa11.87□□□□□ -0.51
RTTN-217ENST00000640393 CLK2P49760 499 aaKnown RBP11.87□□□□□ -0.51
RTTN-217ENST00000640393 GRIPAP1Q4V328 841 aa11.87□□□□□ -0.51
RTTN-217ENST00000640393 PCDHB3Q9Y5E6 796 aa11.87□□□□□ -0.51
RTTN-217ENST00000640393 PCDHB15Q9Y5E8 787 aa11.87□□□□□ -0.51
RTTN-217ENST00000640393 COPS2P61201 443 aa11.86□□□□□ -0.51
RTTN-217ENST00000640393 USP46P62068 366 aa11.86□□□□□ -0.51
RTTN-217ENST00000640393 PRR14Q9BWN1 585 aa11.86□□□□□ -0.51
RTTN-217ENST00000640393 FDX1P10109 184 aa11.85□□□□□ -0.51
RTTN-217ENST00000640393 RSBN1LQ6PCB5 846 aaPredicted RBP11.85□□□□□ -0.51
RTTN-217ENST00000640393 BLOC1S3Q6QNY0 202 aa11.83□□□□□ -0.52
RTTN-217ENST00000640393 SPTLC1O15269 473 aa11.82□□□□□ -0.52
RTTN-217ENST00000640393 MMRN1Q13201 1228 aa11.82□□□□□ -0.52
RTTN-217ENST00000640393 SYMPKQ92797 1274 aaKnown RBP11.82□□□□□ -0.52
RTTN-217ENST00000640393 GOPCQ9HD26 462 aa11.82□□□□□ -0.52
RTTN-217ENST00000640393 PCDHGC3Q9UN70 934 aa11.82□□□□□ -0.52
RTTN-217ENST00000640393 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
RTTN-217ENST00000640393 NUTM2BA6NNL0 878 aaPredicted RBP11.81□□□□□ -0.52
RTTN-217ENST00000640393 NUTM2EB1AL46 878 aaPredicted RBP11.81□□□□□ -0.52
RTTN-217ENST00000640393 MORN1Q5T089 497 aa11.81□□□□□ -0.52
RTTN-217ENST00000640393 NUTM2DQ5VT03 806 aaPredicted RBP11.81□□□□□ -0.52
RTTN-217ENST00000640393 NUTM2AQ8IVF1 878 aaPredicted RBP11.81□□□□□ -0.52
RTTN-217ENST00000640393 C6orf229H3BNL8 230 aa11.8□□□□□ -0.52
RTTN-217ENST00000640393 CABLES1Q8TDN4 633 aa11.8□□□□□ -0.52
RTTN-217ENST00000640393 HCSTQ9UBK5 93 aa11.8□□□□□ -0.52
RTTN-217ENST00000640393 GTF3C3Q9Y5Q9 886 aa11.8□□□□□ -0.52
RTTN-217ENST00000640393 QPCTQ16769 361 aa11.79□□□□□ -0.52
RTTN-217ENST00000640393 SCUBE3Q8IX30 993 aa11.79□□□□□ -0.52
RTTN-217ENST00000640393 FBXO31Q5XUX0 539 aaPredicted RBP11.78□□□□□ -0.52
RTTN-217ENST00000640393 NR1I2O75469 434 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms