RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
SCARB2-221ENST00000640341 TRAK1Q9UPV9 953 aa19.02■□□□□ 0.64
SCARB2-221ENST00000640341 DMRT2Q9Y5R5 561 aa19.02■□□□□ 0.63
SCARB2-221ENST00000640341 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
SCARB2-221ENST00000640341 ADGRF5Q8IZF2 1346 aa19.01■□□□□ 0.63
SCARB2-221ENST00000640341 WDR7Q9Y4E6 1490 aa19■□□□□ 0.63
SCARB2-221ENST00000640341 PLCH2O75038 1416 aa19■□□□□ 0.63
SCARB2-221ENST00000640341 SLFN5Q08AF3 891 aa18.99■□□□□ 0.63
SCARB2-221ENST00000640341 CENPQQ7L2Z9 268 aaPredicted RBP18.99■□□□□ 0.63
SCARB2-221ENST00000640341 BCL2L13Q9BXK5 485 aa18.98■□□□□ 0.63
SCARB2-221ENST00000640341 SCAPERQ9BY12 1400 aa18.97■□□□□ 0.63
SCARB2-221ENST00000640341 UNC13BO14795 1591 aa18.97■□□□□ 0.63
SCARB2-221ENST00000640341 SAFB2Q14151 953 aaKnown RBP eCLIP18.97■□□□□ 0.63
SCARB2-221ENST00000640341 TMEM132EQ6IEE7 984 aa18.97■□□□□ 0.63
SCARB2-221ENST00000640341 GGT6Q6P531 493 aa18.97■□□□□ 0.63
SCARB2-221ENST00000640341 CARD14Q9BXL6 1004 aa18.97■□□□□ 0.63
SCARB2-221ENST00000640341 ZMYM4Q5VZL5 1548 aa18.97■□□□□ 0.63
SCARB2-221ENST00000640341 KANK1Q14678 1352 aa18.96■□□□□ 0.63
SCARB2-221ENST00000640341 COG6Q9Y2V7 657 aa18.96■□□□□ 0.63
SCARB2-221ENST00000640341 DDRGK1Q96HY6 314 aa18.96■□□□□ 0.63
SCARB2-221ENST00000640341 PANK1Q8TE04 598 aa18.96■□□□□ 0.63
SCARB2-221ENST00000640341 MYO5CQ9NQX4 1742 aa18.95■□□□□ 0.62
SCARB2-221ENST00000640341 MAST1Q9Y2H9 1570 aa18.95■□□□□ 0.62
SCARB2-221ENST00000640341 SCAF11Q99590 1463 aaKnown RBP18.95■□□□□ 0.62
SCARB2-221ENST00000640341 ABCC2Q92887 1545 aa18.94■□□□□ 0.62
SCARB2-221ENST00000640341 IQGAP3Q86VI3 1631 aa18.94■□□□□ 0.62
SCARB2-221ENST00000640341 IL27Q8NEV9 243 aa18.94■□□□□ 0.62
SCARB2-221ENST00000640341 EIF2AK4Q9P2K8 1649 aaKnown RBP18.94■□□□□ 0.62
SCARB2-221ENST00000640341 SLC12A5Q9H2X9 1139 aa18.94■□□□□ 0.62
SCARB2-221ENST00000640341 EIF3AQ14152 1382 aaKnown RBP18.94■□□□□ 0.62
SCARB2-221ENST00000640341 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
SCARB2-221ENST00000640341 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
SCARB2-221ENST00000640341 MORC1Q86VD1 984 aa18.94■□□□□ 0.62
SCARB2-221ENST00000640341 KDM2BQ8NHM5 1336 aa18.93■□□□□ 0.62
SCARB2-221ENST00000640341 CHD1O14646 1710 aa18.93■□□□□ 0.62
SCARB2-221ENST00000640341 CLUAP1Q96AJ1 413 aa18.93■□□□□ 0.62
SCARB2-221ENST00000640341 ATP10AO60312 1499 aa18.92■□□□□ 0.62
SCARB2-221ENST00000640341 ZNF521Q96K83 1311 aa18.91■□□□□ 0.62
SCARB2-221ENST00000640341 E9PSI1 815 aa18.9■□□□□ 0.62
SCARB2-221ENST00000640341 IGHDP01880 384 aa18.9■□□□□ 0.62
SCARB2-221ENST00000640341 UGGT1Q9NYU2 1555 aa18.9■□□□□ 0.62
SCARB2-221ENST00000640341 C8orf34Q49A92 452 aa18.89■□□□□ 0.61
SCARB2-221ENST00000640341 ASXL1Q8IXJ9 1541 aa18.89■□□□□ 0.61
SCARB2-221ENST00000640341 CENPJQ9HC77 1338 aaPredicted RBP18.89■□□□□ 0.61
SCARB2-221ENST00000640341 PLXNC1O60486 1568 aa18.88■□□□□ 0.61
SCARB2-221ENST00000640341 NFKBIBQ15653 356 aa18.88■□□□□ 0.61
SCARB2-221ENST00000640341 WWC1Q8IX03 1113 aa18.86■□□□□ 0.61
SCARB2-221ENST00000640341 TNNQ9UQP3 1299 aa18.86■□□□□ 0.61
SCARB2-221ENST00000640341 TCP11L2Q8N4U5 519 aa18.84■□□□□ 0.61
SCARB2-221ENST00000640341 ABCC1P33527 1531 aa18.84■□□□□ 0.61
SCARB2-221ENST00000640341 NKTRP30414 1462 aaKnown RBP18.83■□□□□ 0.61
SCARB2-221ENST00000640341 MADDQ8WXG6 1647 aa18.83■□□□□ 0.61
SCARB2-221ENST00000640341 MTHFSP49914 203 aa18.83■□□□□ 0.61
SCARB2-221ENST00000640341 STK26Q9P289 416 aa18.83■□□□□ 0.6
SCARB2-221ENST00000640341 PIK3C2GO75747 1445 aa18.82■□□□□ 0.6
SCARB2-221ENST00000640341 FANCAO15360 1455 aa18.82■□□□□ 0.6
SCARB2-221ENST00000640341 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
SCARB2-221ENST00000640341 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
SCARB2-221ENST00000640341 USP35Q9P2H5 1018 aa18.82■□□□□ 0.6
SCARB2-221ENST00000640341 INSRP06213 1382 aa18.82■□□□□ 0.6
SCARB2-221ENST00000640341 CLTCL1P53675 1640 aa18.81■□□□□ 0.6
SCARB2-221ENST00000640341 LAMC1P11047 1609 aa18.81■□□□□ 0.6
SCARB2-221ENST00000640341 NSD3Q9BZ95 1437 aa18.81■□□□□ 0.6
SCARB2-221ENST00000640341 ZCCHC11Q5TAX3 1644 aaKnown RBP18.8■□□□□ 0.6
SCARB2-221ENST00000640341 SLKQ9H2G2 1235 aaPredicted RBP18.8■□□□□ 0.6
SCARB2-221ENST00000640341 FRAT2O75474 233 aaPredicted RBP18.8■□□□□ 0.6
SCARB2-221ENST00000640341 STAC3Q96MF2 364 aa18.8■□□□□ 0.6
SCARB2-221ENST00000640341 U2SURPO15042 1029 aaKnown RBP18.8■□□□□ 0.6
SCARB2-221ENST00000640341 SEC24BO95487 1268 aa18.8■□□□□ 0.6
SCARB2-221ENST00000640341 NOS1P29475 1434 aa18.79■□□□□ 0.6
SCARB2-221ENST00000640341 TRMT2AQ8IZ69 625 aaKnown RBP18.79■□□□□ 0.6
SCARB2-221ENST00000640341 TRPM2O94759 1503 aa18.79■□□□□ 0.6
SCARB2-221ENST00000640341 ADGRL1O94910 1474 aa18.78■□□□□ 0.6
SCARB2-221ENST00000640341 CABP2Q9NPB3 220 aa18.78■□□□□ 0.6
SCARB2-221ENST00000640341 BRPF3Q9ULD4 1205 aa18.78■□□□□ 0.6
SCARB2-221ENST00000640341 ERVK-7P63135 1459 aa18.78■□□□□ 0.6
SCARB2-221ENST00000640341 PTPRTO14522 1441 aa18.77■□□□□ 0.6
SCARB2-221ENST00000640341 SPRYD3Q8NCJ5 442 aa18.77■□□□□ 0.6
SCARB2-221ENST00000640341 ARXQ96QS3 562 aa18.77■□□□□ 0.6
SCARB2-221ENST00000640341 CFAP65Q6ZU64 1925 aaKnown RBP18.77■□□□□ 0.59
SCARB2-221ENST00000640341 GSE1Q14687 1217 aa18.77■□□□□ 0.59
SCARB2-221ENST00000640341 RNF17Q9BXT8 1623 aaKnown RBP18.76■□□□□ 0.59
SCARB2-221ENST00000640341 CGNL1Q0VF96 1302 aa18.76■□□□□ 0.59
SCARB2-221ENST00000640341 RLBP1P12271 317 aa18.76■□□□□ 0.59
SCARB2-221ENST00000640341 SYNMO15061 1565 aa18.76■□□□□ 0.59
SCARB2-221ENST00000640341 RUNDC1Q96C34 613 aa18.76■□□□□ 0.59
SCARB2-221ENST00000640341 ZFYVE16Q7Z3T8 1539 aa18.76■□□□□ 0.59
SCARB2-221ENST00000640341 CFAP53Q96M91 514 aa18.75■□□□□ 0.59
SCARB2-221ENST00000640341 NPM1P06748 294 aaKnown RBP eCLIP18.75■□□□□ 0.59
SCARB2-221ENST00000640341 TSR2Q969E8 191 aaKnown RBP18.75■□□□□ 0.59
SCARB2-221ENST00000640341 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
SCARB2-221ENST00000640341 RARSP54136 660 aaKnown RBP18.74■□□□□ 0.59
SCARB2-221ENST00000640341 RTEL1-TNFRSF6BF6WH68 1400 aa18.74■□□□□ 0.59
SCARB2-221ENST00000640341 SRPK2P78362 688 aaKnown RBP18.73■□□□□ 0.59
SCARB2-221ENST00000640341 IQGAP1P46940 1657 aa18.73■□□□□ 0.59
SCARB2-221ENST00000640341 ATP7AQ04656 1500 aa18.73■□□□□ 0.59
SCARB2-221ENST00000640341 PDE3AQ14432 1141 aa18.72■□□□□ 0.59
SCARB2-221ENST00000640341 FTSJ3Q8IY81 847 aaKnown RBP18.72■□□□□ 0.59
SCARB2-221ENST00000640341 PCDHB15Q9Y5E8 787 aa18.72■□□□□ 0.59
SCARB2-221ENST00000640341 GGNBP2Q9H3C7 697 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms