RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 SCP2P22307 547 aa7.69□□□□□ -1.18
NECAP1-222ENST00000640072 TSPAN18Q96SJ8 248 aa7.69□□□□□ -1.18
NECAP1-222ENST00000640072 FOXD4L1Q9NU39 408 aa7.69□□□□□ -1.18
NECAP1-222ENST00000640072 WDR70Q9NW82 654 aa7.69□□□□□ -1.18
NECAP1-222ENST00000640072 SLC4A3P48751 1232 aa7.69□□□□□ -1.18
NECAP1-222ENST00000640072 LETM1O95202 739 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-222ENST00000640072 SUGT1Q9Y2Z0 365 aa7.68□□□□□ -1.18
NECAP1-222ENST00000640072 SATB1Q01826 763 aa7.68□□□□□ -1.18
NECAP1-222ENST00000640072 RNF217Q8TC41 542 aa7.68□□□□□ -1.18
NECAP1-222ENST00000640072 GEMIN8Q9NWZ8 242 aaKnown RBP7.68□□□□□ -1.18
NECAP1-222ENST00000640072 ZFYVE27Q5T4F4 411 aa7.68□□□□□ -1.18
NECAP1-222ENST00000640072 CXorf38Q8TB03 319 aa7.68□□□□□ -1.18
NECAP1-222ENST00000640072 ERBB3P21860 1342 aa7.68□□□□□ -1.18
NECAP1-222ENST00000640072 RHBDL3P58872 404 aa7.67□□□□□ -1.18
NECAP1-222ENST00000640072 WDR78Q5VTH9 848 aa7.67□□□□□ -1.18
NECAP1-222ENST00000640072 MPHOSPH10O00566 681 aaKnown RBP7.67□□□□□ -1.18
NECAP1-222ENST00000640072 EPB41L2O43491 1005 aaKnown RBP7.67□□□□□ -1.18
NECAP1-222ENST00000640072 PAX3P23760 479 aa7.67□□□□□ -1.18
NECAP1-222ENST00000640072 GTPBP4Q9BZE4 634 aaKnown RBP7.67□□□□□ -1.18
NECAP1-222ENST00000640072 SLC24A3Q9HC58 644 aa7.67□□□□□ -1.18
NECAP1-222ENST00000640072 FRMD4BQ9Y2L6 1034 aa7.67□□□□□ -1.18
NECAP1-222ENST00000640072 PDE4AP27815 886 aa7.66□□□□□ -1.18
NECAP1-222ENST00000640072 DNAJC14Q6Y2X3 702 aaPredicted RBP7.66□□□□□ -1.18
NECAP1-222ENST00000640072 SPATA32Q96LK8 384 aa7.66□□□□□ -1.18
NECAP1-222ENST00000640072 PAIP2Q9BPZ3 127 aaKnown RBP7.66□□□□□ -1.18
NECAP1-222ENST00000640072 TRAIPQ9BWF2 469 aa7.66□□□□□ -1.18
NECAP1-222ENST00000640072 IPO8O15397 1037 aaKnown RBP7.66□□□□□ -1.18
NECAP1-222ENST00000640072 TNNT3P45378 269 aaPredicted RBP7.66□□□□□ -1.18
NECAP1-222ENST00000640072 MKRN3Q13064 507 aaKnown RBP7.66□□□□□ -1.18
NECAP1-222ENST00000640072 PROCA1Q8NCQ7 364 aaPredicted RBP7.66□□□□□ -1.18
NECAP1-222ENST00000640072 RPS6KL1Q9Y6S9 549 aa7.66□□□□□ -1.18
NECAP1-222ENST00000640072 MAP4K4O95819 1239 aaPredicted RBP7.65□□□□□ -1.18
NECAP1-222ENST00000640072 ZKSCAN2Q63HK3 967 aa7.65□□□□□ -1.18
NECAP1-222ENST00000640072 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
NECAP1-222ENST00000640072 ZRSR2Q15696 482 aaKnown RBP7.65□□□□□ -1.18
NECAP1-222ENST00000640072 LONRF3Q496Y0 759 aa7.65□□□□□ -1.18
NECAP1-222ENST00000640072 NBPF10Q6P3W6 841 aaKnown RBP7.65□□□□□ -1.18
NECAP1-222ENST00000640072 YY1AP1Q9H869 796 aa7.65□□□□□ -1.18
NECAP1-222ENST00000640072 ZNF771Q7L3S4 317 aaPredicted RBP7.65□□□□□ -1.19
NECAP1-222ENST00000640072 MSL3Q8N5Y2 521 aaKnown RBP7.65□□□□□ -1.19
NECAP1-222ENST00000640072 RETREG2Q8NC44 543 aa7.65□□□□□ -1.19
NECAP1-222ENST00000640072 ARHGEF1Q92888 912 aaKnown RBP7.65□□□□□ -1.19
NECAP1-222ENST00000640072 MSNP26038 577 aaKnown RBP7.64□□□□□ -1.19
NECAP1-222ENST00000640072 RAI14Q9P0K7 980 aa7.64□□□□□ -1.19
NECAP1-222ENST00000640072 POGKQ9P215 609 aa7.64□□□□□ -1.19
NECAP1-222ENST00000640072 SDR16C5Q8N3Y7 309 aa7.64□□□□□ -1.19
NECAP1-222ENST00000640072 ZCRB1Q8TBF4 217 aaKnown RBP7.64□□□□□ -1.19
NECAP1-222ENST00000640072 CALR3Q96L12 384 aaKnown RBP7.64□□□□□ -1.19
NECAP1-222ENST00000640072 RBM28Q9NW13 759 aaKnown RBP7.64□□□□□ -1.19
NECAP1-222ENST00000640072 RGL2O15211 777 aa7.64□□□□□ -1.19
NECAP1-222ENST00000640072 RAB11FIP3O75154 756 aa7.64□□□□□ -1.19
NECAP1-222ENST00000640072 DDX46Q7L014 1031 aaKnown RBP7.64□□□□□ -1.19
NECAP1-222ENST00000640072 SIN3AQ96ST3 1273 aa7.64□□□□□ -1.19
NECAP1-222ENST00000640072 R3HCC1Q9Y3T6 440 aaKnown RBP7.64□□□□□ -1.19
NECAP1-222ENST00000640072 EEA1Q15075 1411 aa7.63□□□□□ -1.19
NECAP1-222ENST00000640072 KCNJ4P48050 445 aa7.63□□□□□ -1.19
NECAP1-222ENST00000640072 ZNF662Q6ZS27 426 aa7.63□□□□□ -1.19
NECAP1-222ENST00000640072 ERCC3P19447 782 aa7.63□□□□□ -1.19
NECAP1-222ENST00000640072 ZBTB9Q96C00 473 aa7.62□□□□□ -1.19
NECAP1-222ENST00000640072 PPFIA4O75335 1185 aa7.62□□□□□ -1.19
NECAP1-222ENST00000640072 MTA1Q13330 715 aa7.62□□□□□ -1.19
NECAP1-222ENST00000640072 TMC1Q8TDI8 760 aa7.62□□□□□ -1.19
NECAP1-222ENST00000640072 NAP1L1P55209 391 aaKnown RBP7.61□□□□□ -1.19
NECAP1-222ENST00000640072 IRF5Q13568 498 aa7.61□□□□□ -1.19
NECAP1-222ENST00000640072 ZKSCAN8Q15776 578 aaPredicted RBP7.61□□□□□ -1.19
NECAP1-222ENST00000640072 VTI1AQ96AJ9 217 aa7.61□□□□□ -1.19
NECAP1-222ENST00000640072 PES1O00541 588 aaKnown RBP7.61□□□□□ -1.19
NECAP1-222ENST00000640072 SETDB1Q15047 1291 aa7.61□□□□□ -1.19
NECAP1-222ENST00000640072 DNAJC5Q9H3Z4 198 aa7.61□□□□□ -1.19
NECAP1-222ENST00000640072 XRCC6P12956 609 aaKnown RBP eCLIP7.61□□□□□ -1.19
NECAP1-222ENST00000640072 NUB1Q9Y5A7 615 aa7.61□□□□□ -1.19
NECAP1-222ENST00000640072 CBX1P83916 185 aa7.6□□□□□ -1.19
NECAP1-222ENST00000640072 MORC4Q8TE76 937 aa7.6□□□□□ -1.19
NECAP1-222ENST00000640072 UQCRHLA0A096LP55 91 aa7.6□□□□□ -1.19
NECAP1-222ENST00000640072 STK10O94804 968 aaKnown RBP7.6□□□□□ -1.19
NECAP1-222ENST00000640072 UQCRHP07919 91 aa7.6□□□□□ -1.19
NECAP1-222ENST00000640072 MFSD4BQ5TF39 518 aa7.6□□□□□ -1.19
NECAP1-222ENST00000640072 SIRT1Q96EB6 747 aa7.6□□□□□ -1.19
NECAP1-222ENST00000640072 CCDC94Q9BW85 323 aaPredicted RBP7.6□□□□□ -1.19
NECAP1-222ENST00000640072 CREB3O43889 395 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 CSPP1Q1MSJ5 1256 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 RPAINQ86UA6 219 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 CEP83Q9Y592 693 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 ABCC9O60706 1549 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 ACRBPQ8NEB7 543 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 HIRIP3Q9BW71 556 aaPredicted RBP7.59□□□□□ -1.19
NECAP1-222ENST00000640072 KLHL42Q9P2K6 505 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 CSB-PGBD3P0DP91 1061 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 ZSCAN20P17040 1043 aaPredicted RBP7.59□□□□□ -1.19
NECAP1-222ENST00000640072 MRE11P49959 708 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 ANKRD23Q86SG2 305 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 PANK2Q9BZ23 570 aa7.59□□□□□ -1.19
NECAP1-222ENST00000640072 HMGN5P82970 282 aaKnown RBP7.58□□□□□ -1.2
NECAP1-222ENST00000640072 BACH2Q9BYV9 841 aa7.58□□□□□ -1.2
NECAP1-222ENST00000640072 METTL14Q9HCE5 456 aaKnown RBP7.58□□□□□ -1.2
NECAP1-222ENST00000640072 CTDP1Q9Y5B0 961 aaPredicted RBP7.58□□□□□ -1.2
NECAP1-222ENST00000640072 CCDC66A2RUB6 948 aa7.58□□□□□ -1.2
NECAP1-222ENST00000640072 ERICH4A6NGS2 130 aa7.58□□□□□ -1.2
NECAP1-222ENST00000640072 UNCXA6NJT0 531 aa7.58□□□□□ -1.2
NECAP1-222ENST00000640072 TRIM6-TRIM34B2RNG4 842 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms