RNA–Protein interactions for RNA: ENST00000639871.1

VPS51-217, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5 BASIC

Gene VPS51, Length 243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-217ENST00000639871 RRBP1Q9P2E9 1410 aaKnown RBP26.88■■□□□ 1.89
VPS51-217ENST00000639871 XIRP1Q702N8 1843 aaKnown RBP26.88■■□□□ 1.89
VPS51-217ENST00000639871 ITGAEP38570 1179 aa26.87■■□□□ 1.89
VPS51-217ENST00000639871 RIMS2Q9UQ26 1411 aa26.87■■□□□ 1.89
VPS51-217ENST00000639871 TMEM94Q12767 1356 aa26.86■■□□□ 1.89
VPS51-217ENST00000639871 NWD1Q149M9 1564 aa26.85■■□□□ 1.89
VPS51-217ENST00000639871 SOCS7O14512 581 aa26.85■■□□□ 1.89
VPS51-217ENST00000639871 HDGFP51858 240 aaKnown RBP26.84■■□□□ 1.89
VPS51-217ENST00000639871 NKTRP30414 1462 aaKnown RBP26.83■■□□□ 1.89
VPS51-217ENST00000639871 MED1Q15648 1581 aaPredicted RBP26.8■■□□□ 1.88
VPS51-217ENST00000639871 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.8■■□□□ 1.88
VPS51-217ENST00000639871 TBX22Q9Y458 520 aa26.8■■□□□ 1.88
VPS51-217ENST00000639871 MYO5BQ9ULV0 1848 aa26.79■■□□□ 1.88
VPS51-217ENST00000639871 FAM135BQ49AJ0 1406 aa26.79■■□□□ 1.88
VPS51-217ENST00000639871 PROSER2Q86WR7 435 aaPredicted RBP26.78■■□□□ 1.88
VPS51-217ENST00000639871 ADAMTS13Q76LX8 1427 aa26.76■■□□□ 1.87
VPS51-217ENST00000639871 PPP1R15AO75807 674 aaPredicted RBP26.76■■□□□ 1.87
VPS51-217ENST00000639871 CHGAP10645 457 aaKnown RBP26.75■■□□□ 1.87
VPS51-217ENST00000639871 BCANQ96GW7 911 aa26.75■■□□□ 1.87
VPS51-217ENST00000639871 NAIPQ13075 1403 aa26.74■■□□□ 1.87
VPS51-217ENST00000639871 RBM33Q96EV2 1170 aaKnown RBP26.73■■□□□ 1.87
VPS51-217ENST00000639871 PIK3R4Q99570 1358 aa26.71■■□□□ 1.87
VPS51-217ENST00000639871 CHD2O14647 1828 aaKnown RBP26.7■■□□□ 1.87
VPS51-217ENST00000639871 DIP2AQ14689 1571 aa26.69■■□□□ 1.86
VPS51-217ENST00000639871 NUTM2DQ5VT03 806 aaPredicted RBP26.69■■□□□ 1.86
VPS51-217ENST00000639871 SENP3Q9H4L4 574 aaPredicted RBP26.69■■□□□ 1.86
VPS51-217ENST00000639871 NCOA3Q9Y6Q9 1424 aa26.69■■□□□ 1.86
VPS51-217ENST00000639871 MSH6P52701 1360 aa26.67■■□□□ 1.86
VPS51-217ENST00000639871 HFM1A2PYH4 1435 aa26.65■■□□□ 1.86
VPS51-217ENST00000639871 SPHKAPQ2M3C7 1700 aa26.65■■□□□ 1.86
VPS51-217ENST00000639871 SLAIN2Q9P270 581 aa26.62■■□□□ 1.85
VPS51-217ENST00000639871 TRPM2O94759 1503 aa26.61■■□□□ 1.85
VPS51-217ENST00000639871 ROBO1Q9Y6N7 1651 aa26.6■■□□□ 1.85
VPS51-217ENST00000639871 PTPRUQ92729 1446 aa26.6■■□□□ 1.85
VPS51-217ENST00000639871 SETBP1Q9Y6X0 1596 aa26.59■■□□□ 1.85
VPS51-217ENST00000639871 NRXN3Q9Y4C0 1643 aa26.57■■□□□ 1.84
VPS51-217ENST00000639871 AMOTL2Q9Y2J4 779 aa26.56■■□□□ 1.84
VPS51-217ENST00000639871 CLTCL1P53675 1640 aa26.56■■□□□ 1.84
VPS51-217ENST00000639871 PHF23Q9BUL5 403 aaPredicted RBP26.55■■□□□ 1.84
VPS51-217ENST00000639871 C19orf44Q9H6X5 657 aa26.55■■□□□ 1.84
VPS51-217ENST00000639871 NEXMIFQ5QGS0 1516 aa26.53■■□□□ 1.84
VPS51-217ENST00000639871 ZNF326Q5BKZ1 582 aaKnown RBP26.52■■□□□ 1.84
VPS51-217ENST00000639871 RGS17Q9UGC6 210 aaPredicted RBP26.52■■□□□ 1.84
VPS51-217ENST00000639871 CADPS2Q86UW7 1296 aa26.51■■□□□ 1.83
VPS51-217ENST00000639871 METP08581 1390 aa26.5■■□□□ 1.83
VPS51-217ENST00000639871 XRN1Q8IZH2 1706 aaKnown RBP26.5■■□□□ 1.83
VPS51-217ENST00000639871 TRIM52Q96A61 297 aa26.48■■□□□ 1.83
VPS51-217ENST00000639871 C14orf37Q86TY3 774 aa26.47■■□□□ 1.83
VPS51-217ENST00000639871 SLC4A1APQ9BWU0 796 aaKnown RBP26.47■■□□□ 1.83
VPS51-217ENST00000639871 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.47■■□□□ 1.83
VPS51-217ENST00000639871 DCCP43146 1447 aa26.46■■□□□ 1.83
VPS51-217ENST00000639871 ATF3P18847 181 aa26.45■■□□□ 1.82
VPS51-217ENST00000639871 JCADQ9P266 1359 aa26.43■■□□□ 1.82
VPS51-217ENST00000639871 COL16A1Q07092 1604 aaPredicted RBP26.42■■□□□ 1.82
VPS51-217ENST00000639871 RPGRIP1LQ68CZ1 1315 aa26.41■■□□□ 1.82
VPS51-217ENST00000639871 PHLPP1O60346 1717 aa26.4■■□□□ 1.82
VPS51-217ENST00000639871 KIF1BO60333 1816 aa26.4■■□□□ 1.82
VPS51-217ENST00000639871 VGFO15240 615 aaPredicted RBP26.4■■□□□ 1.82
VPS51-217ENST00000639871 AHDC1Q5TGY3 1603 aaPredicted RBP26.39■■□□□ 1.82
VPS51-217ENST00000639871 BRINP3Q76B58 766 aa26.38■■□□□ 1.81
VPS51-217ENST00000639871 PRAG1Q86YV5 1406 aa26.37■■□□□ 1.81
VPS51-217ENST00000639871 MST1RQ04912 1400 aa26.36■■□□□ 1.81
VPS51-217ENST00000639871 ADGRL3Q9HAR2 1447 aa26.35■■□□□ 1.81
VPS51-217ENST00000639871 PTCH1Q13635 1447 aa26.33■■□□□ 1.81
VPS51-217ENST00000639871 FOXD1Q16676 465 aa26.33■■□□□ 1.81
VPS51-217ENST00000639871 SETD1AO15047 1707 aaKnown RBP26.33■■□□□ 1.81
VPS51-217ENST00000639871 POTEAQ6S8J7 498 aa26.32■■□□□ 1.8
VPS51-217ENST00000639871 MPHOSPH9Q99550 1183 aa26.32■■□□□ 1.8
VPS51-217ENST00000639871 SPATA31A6Q5VVP1 1343 aa26.32■■□□□ 1.8
VPS51-217ENST00000639871 SPATA31E1Q6ZUB1 1445 aa26.3■■□□□ 1.8
VPS51-217ENST00000639871 ASXL1Q8IXJ9 1541 aa26.29■■□□□ 1.8
VPS51-217ENST00000639871 ROBO2Q9HCK4 1378 aa26.29■■□□□ 1.8
VPS51-217ENST00000639871 CCDC144AA2RUR9 1427 aa26.28■■□□□ 1.8
VPS51-217ENST00000639871 LRP6O75581 1613 aa26.28■■□□□ 1.8
VPS51-217ENST00000639871 PPLO60437 1756 aa26.27■■□□□ 1.8
VPS51-217ENST00000639871 SETD5Q9C0A6 1442 aa26.26■■□□□ 1.79
VPS51-217ENST00000639871 ACIN1Q9UKV3 1341 aaKnown RBP26.26■■□□□ 1.79
VPS51-217ENST00000639871 NALCNQ8IZF0 1738 aa26.25■■□□□ 1.79
VPS51-217ENST00000639871 SHPRHQ149N8 1683 aa26.24■■□□□ 1.79
VPS51-217ENST00000639871 ADGRF5Q8IZF2 1346 aa26.22■■□□□ 1.79
VPS51-217ENST00000639871 NHSL1Q5SYE7 1610 aa26.21■■□□□ 1.79
VPS51-217ENST00000639871 C1orf167Q5SNV9 1468 aa26.21■■□□□ 1.79
VPS51-217ENST00000639871 ANKRD30BQ9BXX2 1392 aa26.2■■□□□ 1.79
VPS51-217ENST00000639871 RGL3Q3MIN7 710 aa26.17■■□□□ 1.78
VPS51-217ENST00000639871 LRRC59Q96AG4 307 aaKnown RBP26.17■■□□□ 1.78
VPS51-217ENST00000639871 TECPR2O15040 1411 aa26.16■■□□□ 1.78
VPS51-217ENST00000639871 PIK3C2GO75747 1445 aa26.14■■□□□ 1.78
VPS51-217ENST00000639871 LAMC1P11047 1609 aa26.14■■□□□ 1.78
VPS51-217ENST00000639871 DDX17Q92841 729 aaKnown RBP26.14■■□□□ 1.78
VPS51-217ENST00000639871 IFT172Q9UG01 1749 aa26.14■■□□□ 1.77
VPS51-217ENST00000639871 LRPPRCP42704 1394 aaKnown RBP26.12■■□□□ 1.77
VPS51-217ENST00000639871 PNPLA6Q8IY17 1366 aa26.11■■□□□ 1.77
VPS51-217ENST00000639871 ABCC11Q96J66 1382 aa26.11■■□□□ 1.77
VPS51-217ENST00000639871 ZNF772Q68DY9 489 aaPredicted RBP26.11■■□□□ 1.77
VPS51-217ENST00000639871 ORAI2Q96SN7 254 aa26.11■■□□□ 1.77
VPS51-217ENST00000639871 SOS2Q07890 1332 aaPredicted RBP26.11■■□□□ 1.77
VPS51-217ENST00000639871 RAB3GAP2Q9H2M9 1393 aa26.1■■□□□ 1.77
VPS51-217ENST00000639871 MEX3CQ5U5Q3 659 aaKnown RBP26.1■■□□□ 1.77
VPS51-217ENST00000639871 CDC42BPGQ6DT37 1551 aa26.08■■□□□ 1.77
VPS51-217ENST00000639871 NRXN1Q9ULB1 1477 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms