RNA–Protein interactions for RNA: ENST00000639760.1

SMARCA2-266, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-266ENST00000639760 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
SMARCA2-266ENST00000639760 ZNF771Q7L3S4 317 aaPredicted RBP13.28□□□□□ -0.28
SMARCA2-266ENST00000639760 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
SMARCA2-266ENST00000639760 RTEL1-TNFRSF6BF6WH68 1400 aa13.28□□□□□ -0.28
SMARCA2-266ENST00000639760 PARD3Q8TEW0 1356 aa13.27□□□□□ -0.28
SMARCA2-266ENST00000639760 ANKRD30BQ9BXX2 1392 aa13.27□□□□□ -0.28
SMARCA2-266ENST00000639760 GTF2F1P35269 517 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMARCA2-266ENST00000639760 PRIMPOLQ96LW4 560 aa13.27□□□□□ -0.29
SMARCA2-266ENST00000639760 E9PCH4 1651 aa13.27□□□□□ -0.29
SMARCA2-266ENST00000639760 E9PSI1 815 aa13.27□□□□□ -0.29
SMARCA2-266ENST00000639760 RBM25P49756 843 aaKnown RBP13.27□□□□□ -0.29
SMARCA2-266ENST00000639760 DUSP27Q5VZP5 1158 aa13.27□□□□□ -0.29
SMARCA2-266ENST00000639760 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.29
SMARCA2-266ENST00000639760 KCNJ4P48050 445 aa13.26□□□□□ -0.29
SMARCA2-266ENST00000639760 RAB3GAP1Q15042 981 aa13.26□□□□□ -0.29
SMARCA2-266ENST00000639760 RRP7BPQ9NSQ0 103 aa13.26□□□□□ -0.29
SMARCA2-266ENST00000639760 CCDC39Q9UFE4 941 aa13.26□□□□□ -0.29
SMARCA2-266ENST00000639760 HMGN5P82970 282 aaKnown RBP13.26□□□□□ -0.29
SMARCA2-266ENST00000639760 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
SMARCA2-266ENST00000639760 DHX37Q8IY37 1157 aaKnown RBP13.25□□□□□ -0.29
SMARCA2-266ENST00000639760 C22orf23Q9BZE7 217 aa13.25□□□□□ -0.29
SMARCA2-266ENST00000639760 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
SMARCA2-266ENST00000639760 IGSF3O75054 1194 aa13.24□□□□□ -0.29
SMARCA2-266ENST00000639760 HSP90AB1P08238 724 aaKnown RBP13.24□□□□□ -0.29
SMARCA2-266ENST00000639760 ZNF445P59923 1031 aa13.24□□□□□ -0.29
SMARCA2-266ENST00000639760 KLHL40Q2TBA0 621 aa13.24□□□□□ -0.29
SMARCA2-266ENST00000639760 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
SMARCA2-266ENST00000639760 KDM6BO15054 1643 aa13.24□□□□□ -0.29
SMARCA2-266ENST00000639760 TSC1Q92574 1164 aa13.24□□□□□ -0.29
SMARCA2-266ENST00000639760 JARID2Q92833 1246 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-266ENST00000639760 KIF14Q15058 1648 aa13.24□□□□□ -0.29
SMARCA2-266ENST00000639760 GOLGA6L22H0YM25 854 aa13.23□□□□□ -0.29
SMARCA2-266ENST00000639760 CASKIN1Q8WXD9 1431 aa13.23□□□□□ -0.29
SMARCA2-266ENST00000639760 KIAA2012Q0VF49 1180 aa13.22□□□□□ -0.29
SMARCA2-266ENST00000639760 SMC5Q8IY18 1101 aa13.22□□□□□ -0.29
SMARCA2-266ENST00000639760 PDCL2Q8N4E4 241 aa13.22□□□□□ -0.29
SMARCA2-266ENST00000639760 CGNL1Q0VF96 1302 aa13.22□□□□□ -0.29
SMARCA2-266ENST00000639760 MBD5Q9P267 1494 aa13.22□□□□□ -0.29
SMARCA2-266ENST00000639760 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
SMARCA2-266ENST00000639760 CCDC66A2RUB6 948 aa13.21□□□□□ -0.29
SMARCA2-266ENST00000639760 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
SMARCA2-266ENST00000639760 KIF3AQ9Y496 699 aa13.21□□□□□ -0.29
SMARCA2-266ENST00000639760 NINLQ9Y2I6 1382 aa13.21□□□□□ -0.29
SMARCA2-266ENST00000639760 GABPB1Q06547 395 aaPredicted RBP13.2□□□□□ -0.3
SMARCA2-266ENST00000639760 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
SMARCA2-266ENST00000639760 RBSNQ9H1K0 784 aa13.2□□□□□ -0.3
SMARCA2-266ENST00000639760 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
SMARCA2-266ENST00000639760 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
SMARCA2-266ENST00000639760 MFAP1P55081 439 aaKnown RBP13.19□□□□□ -0.3
SMARCA2-266ENST00000639760 TIGD1Q96MW7 591 aa13.19□□□□□ -0.3
SMARCA2-266ENST00000639760 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
SMARCA2-266ENST00000639760 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
SMARCA2-266ENST00000639760 CERS3Q8IU89 383 aa13.18□□□□□ -0.3
SMARCA2-266ENST00000639760 SNX21Q969T3 373 aa13.18□□□□□ -0.3
SMARCA2-266ENST00000639760 FEZ1Q99689 392 aa13.18□□□□□ -0.3
SMARCA2-266ENST00000639760 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
SMARCA2-266ENST00000639760 U2AF2P26368 475 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMARCA2-266ENST00000639760 CHIC2Q9UKJ5 165 aa13.17□□□□□ -0.3
SMARCA2-266ENST00000639760 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
SMARCA2-266ENST00000639760 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
SMARCA2-266ENST00000639760 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
SMARCA2-266ENST00000639760 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
SMARCA2-266ENST00000639760 ARHGAP31Q2M1Z3 1444 aa13.17□□□□□ -0.3
SMARCA2-266ENST00000639760 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
SMARCA2-266ENST00000639760 OGFRQ9NZT2 677 aa13.16□□□□□ -0.3
SMARCA2-266ENST00000639760 FHOD3Q2V2M9 1422 aa13.16□□□□□ -0.3
SMARCA2-266ENST00000639760 CLEC17AQ6ZS10 378 aa13.16□□□□□ -0.3
SMARCA2-266ENST00000639760 ZNF521Q96K83 1311 aa13.16□□□□□ -0.3
SMARCA2-266ENST00000639760 KIAA1107Q9UPP5 1409 aa13.16□□□□□ -0.3
SMARCA2-266ENST00000639760 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
SMARCA2-266ENST00000639760 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
SMARCA2-266ENST00000639760 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.3
SMARCA2-266ENST00000639760 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
SMARCA2-266ENST00000639760 TULP2O00295 520 aa13.15□□□□□ -0.3
SMARCA2-266ENST00000639760 PDE3AQ14432 1141 aa13.15□□□□□ -0.3
SMARCA2-266ENST00000639760 MMP14P50281 582 aa13.14□□□□□ -0.31
SMARCA2-266ENST00000639760 CAVIN1Q6NZI2 390 aaKnown RBP13.14□□□□□ -0.31
SMARCA2-266ENST00000639760 TRIM6-TRIM34B2RNG4 842 aa13.14□□□□□ -0.31
SMARCA2-266ENST00000639760 BCAR3O75815 825 aa13.14□□□□□ -0.31
SMARCA2-266ENST00000639760 PTMAP06454 111 aaKnown RBP13.14□□□□□ -0.31
SMARCA2-266ENST00000639760 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
SMARCA2-266ENST00000639760 ANKRD7Q92527 254 aa13.14□□□□□ -0.31
SMARCA2-266ENST00000639760 TRIM34Q9BYJ4 488 aa13.14□□□□□ -0.31
SMARCA2-266ENST00000639760 SLFN14P0C7P3 912 aa13.13□□□□□ -0.31
SMARCA2-266ENST00000639760 CAPN2P17655 700 aa13.13□□□□□ -0.31
SMARCA2-266ENST00000639760 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
SMARCA2-266ENST00000639760 PRIM1P49642 420 aaKnown RBP13.13□□□□□ -0.31
SMARCA2-266ENST00000639760 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
SMARCA2-266ENST00000639760 RALGAPBQ86X10 1494 aa13.13□□□□□ -0.31
SMARCA2-266ENST00000639760 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMARCA2-266ENST00000639760 ZBTB7CA1YPR0 619 aa13.13□□□□□ -0.31
SMARCA2-266ENST00000639760 BAG4O95429 457 aaKnown RBP13.13□□□□□ -0.31
SMARCA2-266ENST00000639760 SSFA2P28290 1259 aa13.13□□□□□ -0.31
SMARCA2-266ENST00000639760 PIBF1Q8WXW3 757 aa13.12□□□□□ -0.31
SMARCA2-266ENST00000639760 YY1AP1Q9H869 796 aa13.12□□□□□ -0.31
SMARCA2-266ENST00000639760 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
SMARCA2-266ENST00000639760 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
SMARCA2-266ENST00000639760 EPRSP07814 1512 aaKnown RBP13.12□□□□□ -0.31
SMARCA2-266ENST00000639760 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
SMARCA2-266ENST00000639760 TCOF1Q13428 1488 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms