RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 STAC3Q96MF2 364 aa29.86■■■□□ 2.37
SCARB2-219ENST00000639738 PRAG1Q86YV5 1406 aa29.86■■■□□ 2.37
SCARB2-219ENST00000639738 MYOM2P54296 1465 aa29.86■■■□□ 2.37
SCARB2-219ENST00000639738 KDM2AQ9Y2K7 1162 aa29.86■■■□□ 2.37
SCARB2-219ENST00000639738 HSPA2P54652 639 aa29.85■■■□□ 2.37
SCARB2-219ENST00000639738 NRXN1Q9ULB1 1477 aa29.84■■■□□ 2.37
SCARB2-219ENST00000639738 ZNF326Q5BKZ1 582 aaKnown RBP29.81■■■□□ 2.36
SCARB2-219ENST00000639738 ZNF142P52746 1687 aaPredicted RBP29.8■■■□□ 2.36
SCARB2-219ENST00000639738 ZFYVE9O95405 1425 aa29.8■■■□□ 2.36
SCARB2-219ENST00000639738 TRPM1Q7Z4N2 1603 aa29.79■■■□□ 2.36
SCARB2-219ENST00000639738 CEP170BQ9Y4F5 1589 aaPredicted RBP29.79■■■□□ 2.36
SCARB2-219ENST00000639738 ADGRF5Q8IZF2 1346 aa29.78■■■□□ 2.36
SCARB2-219ENST00000639738 RALGAPBQ86X10 1494 aa29.75■■■□□ 2.35
SCARB2-219ENST00000639738 STAG3Q9UJ98 1225 aa29.75■■■□□ 2.35
SCARB2-219ENST00000639738 RIMS2Q9UQ26 1411 aa29.74■■■□□ 2.35
SCARB2-219ENST00000639738 ARHGAP23Q9P227 1491 aa29.73■■■□□ 2.35
SCARB2-219ENST00000639738 KIAA1210Q9ULL0 1709 aa29.72■■■□□ 2.35
SCARB2-219ENST00000639738 TMEM2Q9UHN6 1383 aa29.72■■■□□ 2.35
SCARB2-219ENST00000639738 SLIT1O75093 1534 aa29.72■■■□□ 2.35
SCARB2-219ENST00000639738 PIK3C2GO75747 1445 aa29.72■■■□□ 2.35
SCARB2-219ENST00000639738 VGFO15240 615 aaPredicted RBP29.7■■■□□ 2.34
SCARB2-219ENST00000639738 STRCQ7RTU9 1775 aa29.69■■■□□ 2.34
SCARB2-219ENST00000639738 NUTM2DQ5VT03 806 aaPredicted RBP29.68■■■□□ 2.34
SCARB2-219ENST00000639738 GPRASP1Q5JY77 1395 aa29.66■■■□□ 2.34
SCARB2-219ENST00000639738 NBPF1Q3BBV0 1214 aa29.65■■■□□ 2.34
SCARB2-219ENST00000639738 THEMISQ8N1K5 641 aaPredicted RBP29.65■■■□□ 2.34
SCARB2-219ENST00000639738 LAMC1P11047 1609 aa29.64■■■□□ 2.34
SCARB2-219ENST00000639738 LTKP29376 864 aa29.61■■■□□ 2.33
SCARB2-219ENST00000639738 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.61■■■□□ 2.33
SCARB2-219ENST00000639738 C14orf93Q9H972 538 aaKnown RBP29.61■■■□□ 2.33
SCARB2-219ENST00000639738 NRXN3Q9Y4C0 1643 aa29.61■■■□□ 2.33
SCARB2-219ENST00000639738 CFAP70Q5T0N1 1121 aa29.61■■■□□ 2.33
SCARB2-219ENST00000639738 FBXO41Q8TF61 875 aa29.59■■■□□ 2.33
SCARB2-219ENST00000639738 SETD1AO15047 1707 aaKnown RBP29.58■■■□□ 2.33
SCARB2-219ENST00000639738 SETBP1Q9Y6X0 1596 aa29.58■■■□□ 2.33
SCARB2-219ENST00000639738 ADGRB1O14514 1584 aa29.57■■■□□ 2.32
SCARB2-219ENST00000639738 ROCK2O75116 1388 aaKnown RBP29.57■■■□□ 2.32
SCARB2-219ENST00000639738 ALKQ9UM73 1620 aa29.56■■■□□ 2.32
SCARB2-219ENST00000639738 HDGFP51858 240 aaKnown RBP29.55■■■□□ 2.32
SCARB2-219ENST00000639738 IQGAP1P46940 1657 aa29.54■■■□□ 2.32
SCARB2-219ENST00000639738 TXNDC2Q86VQ3 553 aa29.54■■■□□ 2.32
SCARB2-219ENST00000639738 ASXL1Q8IXJ9 1541 aa29.53■■■□□ 2.32
SCARB2-219ENST00000639738 PLEKHG1Q9ULL1 1385 aa29.53■■■□□ 2.32
SCARB2-219ENST00000639738 SCAF11Q99590 1463 aaKnown RBP29.52■■■□□ 2.32
SCARB2-219ENST00000639738 CARD11Q9BXL7 1154 aa29.52■■■□□ 2.32
SCARB2-219ENST00000639738 MED14O60244 1454 aa29.5■■■□□ 2.31
SCARB2-219ENST00000639738 ADAMTS13Q76LX8 1427 aa29.49■■■□□ 2.31
SCARB2-219ENST00000639738 EID1Q9Y6B2 187 aa29.49■■■□□ 2.31
SCARB2-219ENST00000639738 HSPA5P11021 654 aaKnown RBP29.48■■■□□ 2.31
SCARB2-219ENST00000639738 USP47Q96K76 1375 aa29.48■■■□□ 2.31
SCARB2-219ENST00000639738 DMRT2Q9Y5R5 561 aa29.47■■■□□ 2.31
SCARB2-219ENST00000639738 EIF4G2P78344 907 aaKnown RBP eCLIP29.46■■■□□ 2.31
SCARB2-219ENST00000639738 POLR1AO95602 1720 aaPredicted RBP29.44■■■□□ 2.3
SCARB2-219ENST00000639738 TMEM132EQ6IEE7 984 aa29.44■■■□□ 2.3
SCARB2-219ENST00000639738 SENP3Q9H4L4 574 aaPredicted RBP29.44■■■□□ 2.3
SCARB2-219ENST00000639738 ZNF316A6NFI3 1004 aaPredicted RBP29.43■■■□□ 2.3
SCARB2-219ENST00000639738 ANKLE2Q86XL3 938 aa29.43■■■□□ 2.3
SCARB2-219ENST00000639738 HIRIP3Q9BW71 556 aaPredicted RBP29.42■■■□□ 2.3
SCARB2-219ENST00000639738 CERKQ8TCT0 537 aa29.4■■■□□ 2.3
SCARB2-219ENST00000639738 METP08581 1390 aa29.39■■■□□ 2.3
SCARB2-219ENST00000639738 DIP2AQ14689 1571 aa29.37■■■□□ 2.29
SCARB2-219ENST00000639738 TBX22Q9Y458 520 aa29.35■■■□□ 2.29
SCARB2-219ENST00000639738 YTHDC2Q9H6S0 1430 aaKnown RBP29.35■■■□□ 2.29
SCARB2-219ENST00000639738 ARHGEF28Q8N1W1 1705 aaKnown RBP29.35■■■□□ 2.29
SCARB2-219ENST00000639738 ST20-MTHFSA0A0A6YYL1 179 aa29.35■■■□□ 2.29
SCARB2-219ENST00000639738 NCKAP5LQ9HCH0 1330 aa29.33■■■□□ 2.29
SCARB2-219ENST00000639738 LRPPRCP42704 1394 aaKnown RBP29.32■■■□□ 2.28
SCARB2-219ENST00000639738 NPHP4O75161 1426 aaPredicted RBP29.32■■■□□ 2.28
SCARB2-219ENST00000639738 SLC26A8Q96RN1 970 aa29.31■■■□□ 2.28
SCARB2-219ENST00000639738 TESK2Q96S53 571 aa29.3■■■□□ 2.28
SCARB2-219ENST00000639738 KNDC1Q76NI1 1749 aa29.3■■■□□ 2.28
SCARB2-219ENST00000639738 ABCC11Q96J66 1382 aa29.3■■■□□ 2.28
SCARB2-219ENST00000639738 PTPRUQ92729 1446 aa29.29■■■□□ 2.28
SCARB2-219ENST00000639738 DLC1Q96QB1 1528 aa29.29■■■□□ 2.28
SCARB2-219ENST00000639738 TRAK1Q9UPV9 953 aa29.29■■■□□ 2.28
SCARB2-219ENST00000639738 C11orf95C9JLR9 678 aaPredicted RBP29.28■■■□□ 2.28
SCARB2-219ENST00000639738 BCANQ96GW7 911 aa29.28■■■□□ 2.28
SCARB2-219ENST00000639738 TECPR2O15040 1411 aa29.27■■■□□ 2.28
SCARB2-219ENST00000639738 LTBP4Q8N2S1 1624 aa29.26■■■□□ 2.27
SCARB2-219ENST00000639738 EIF3AQ14152 1382 aaKnown RBP29.25■■■□□ 2.27
SCARB2-219ENST00000639738 STK26Q9P289 416 aa29.24■■■□□ 2.27
SCARB2-219ENST00000639738 PIK3R4Q99570 1358 aa29.24■■■□□ 2.27
SCARB2-219ENST00000639738 CHD2O14647 1828 aaKnown RBP29.23■■■□□ 2.27
SCARB2-219ENST00000639738 CPS1P31327 1500 aa29.23■■■□□ 2.27
SCARB2-219ENST00000639738 XRN1Q8IZH2 1706 aaKnown RBP29.23■■■□□ 2.27
SCARB2-219ENST00000639738 QRICH2Q9H0J4 1663 aa29.22■■■□□ 2.27
SCARB2-219ENST00000639738 SIRT1Q96EB6 747 aa29.21■■■□□ 2.27
SCARB2-219ENST00000639738 SBNO2Q9Y2G9 1366 aa29.21■■■□□ 2.27
SCARB2-219ENST00000639738 CENPJQ9HC77 1338 aaPredicted RBP29.2■■■□□ 2.26
SCARB2-219ENST00000639738 WASHC2AQ641Q2 1341 aa29.19■■■□□ 2.26
SCARB2-219ENST00000639738 FAM135BQ49AJ0 1406 aa29.17■■■□□ 2.26
SCARB2-219ENST00000639738 ROBO2Q9HCK4 1378 aa29.16■■■□□ 2.26
SCARB2-219ENST00000639738 CCDC7Q96M83 1385 aa29.15■■■□□ 2.26
SCARB2-219ENST00000639738 DISP3Q9P2K9 1392 aa29.15■■■□□ 2.26
SCARB2-219ENST00000639738 AMOTL2Q9Y2J4 779 aa29.15■■■□□ 2.26
SCARB2-219ENST00000639738 PLEKHH1Q9ULM0 1364 aa29.14■■■□□ 2.26
SCARB2-219ENST00000639738 KIF7Q2M1P5 1343 aa29.14■■■□□ 2.26
SCARB2-219ENST00000639738 PRAM1Q96QH2 718 aa29.14■■■□□ 2.25
SCARB2-219ENST00000639738 IQSEC2Q5JU85 1478 aa29.13■■■□□ 2.25
SCARB2-219ENST00000639738 NWD1Q149M9 1564 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms