RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 FRMPD1Q5SYB0 1578 aa11.62□□□□□ -0.55
NECAP1-218ENST00000639595 RNF123Q5XPI4 1314 aa11.62□□□□□ -0.55
NECAP1-218ENST00000639595 KIAA1210Q9ULL0 1709 aa11.61□□□□□ -0.55
NECAP1-218ENST00000639595 NRXN1Q9ULB1 1477 aa11.61□□□□□ -0.55
NECAP1-218ENST00000639595 PPP4R2Q9NY27 417 aa11.61□□□□□ -0.55
NECAP1-218ENST00000639595 EIF3AQ14152 1382 aaKnown RBP11.6□□□□□ -0.55
NECAP1-218ENST00000639595 PPRC1Q5VV67 1664 aaKnown RBP11.6□□□□□ -0.55
NECAP1-218ENST00000639595 ZMYM4Q5VZL5 1548 aa11.6□□□□□ -0.55
NECAP1-218ENST00000639595 ADGRF5Q8IZF2 1346 aa11.59□□□□□ -0.55
NECAP1-218ENST00000639595 HECW2Q9P2P5 1572 aa11.59□□□□□ -0.55
NECAP1-218ENST00000639595 NPATQ14207 1427 aa11.59□□□□□ -0.55
NECAP1-218ENST00000639595 UGGT1Q9NYU2 1555 aa11.59□□□□□ -0.55
NECAP1-218ENST00000639595 IRX6P78412 446 aaPredicted RBP11.59□□□□□ -0.55
NECAP1-218ENST00000639595 MAP3K4Q9Y6R4 1608 aa11.59□□□□□ -0.55
NECAP1-218ENST00000639595 CFAP70Q5T0N1 1121 aa11.58□□□□□ -0.56
NECAP1-218ENST00000639595 CC2D1BQ5T0F9 858 aaKnown RBP11.57□□□□□ -0.56
NECAP1-218ENST00000639595 ADGRB3O60242 1522 aa11.57□□□□□ -0.56
NECAP1-218ENST00000639595 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
NECAP1-218ENST00000639595 RPGRIP1LQ68CZ1 1315 aa11.57□□□□□ -0.56
NECAP1-218ENST00000639595 AMER1Q5JTC6 1135 aaPredicted RBP11.57□□□□□ -0.56
NECAP1-218ENST00000639595 RAPGEF3O95398 923 aa11.56□□□□□ -0.56
NECAP1-218ENST00000639595 GGT6Q6P531 493 aa11.56□□□□□ -0.56
NECAP1-218ENST00000639595 KNSTRNQ9Y448 316 aa11.56□□□□□ -0.56
NECAP1-218ENST00000639595 PDE3BQ13370 1112 aa11.56□□□□□ -0.56
NECAP1-218ENST00000639595 SBNO2Q9Y2G9 1366 aa11.56□□□□□ -0.56
NECAP1-218ENST00000639595 ABCC3O15438 1527 aa11.55□□□□□ -0.56
NECAP1-218ENST00000639595 SYNMO15061 1565 aa11.55□□□□□ -0.56
NECAP1-218ENST00000639595 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
NECAP1-218ENST00000639595 NOS1P29475 1434 aa11.55□□□□□ -0.56
NECAP1-218ENST00000639595 KIF1BO60333 1816 aa11.55□□□□□ -0.56
NECAP1-218ENST00000639595 ABCA6Q8N139 1617 aa11.55□□□□□ -0.56
NECAP1-218ENST00000639595 IFT172Q9UG01 1749 aa11.54□□□□□ -0.56
NECAP1-218ENST00000639595 C14orf93Q9H972 538 aaKnown RBP11.54□□□□□ -0.56
NECAP1-218ENST00000639595 ARHGAP31Q2M1Z3 1444 aa11.54□□□□□ -0.56
NECAP1-218ENST00000639595 BLMP54132 1417 aaPredicted RBP11.53□□□□□ -0.56
NECAP1-218ENST00000639595 SETBP1Q9Y6X0 1596 aa11.53□□□□□ -0.56
NECAP1-218ENST00000639595 GLI2P10070 1586 aa11.53□□□□□ -0.56
NECAP1-218ENST00000639595 PIK3C2GO75747 1445 aa11.53□□□□□ -0.56
NECAP1-218ENST00000639595 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
NECAP1-218ENST00000639595 ERVK-7P63135 1459 aa11.52□□□□□ -0.57
NECAP1-218ENST00000639595 PPP2R1AP30153 589 aa11.52□□□□□ -0.57
NECAP1-218ENST00000639595 DIP2CQ9Y2E4 1556 aa11.52□□□□□ -0.57
NECAP1-218ENST00000639595 MROH2AA6NES4 1674 aa11.51□□□□□ -0.57
NECAP1-218ENST00000639595 ASXL1Q8IXJ9 1541 aa11.51□□□□□ -0.57
NECAP1-218ENST00000639595 PLPPR3Q6T4P5 718 aa11.51□□□□□ -0.57
NECAP1-218ENST00000639595 RBM19Q9Y4C8 960 aaKnown RBP11.5□□□□□ -0.57
NECAP1-218ENST00000639595 MYO3AQ8NEV4 1616 aa11.5□□□□□ -0.57
NECAP1-218ENST00000639595 CYB5RLQ6IPT4 315 aa11.49□□□□□ -0.57
NECAP1-218ENST00000639595 RICTORQ6R327 1708 aa11.49□□□□□ -0.57
NECAP1-218ENST00000639595 ADGRB1O14514 1584 aa11.49□□□□□ -0.57
NECAP1-218ENST00000639595 CENPJQ9HC77 1338 aaPredicted RBP11.49□□□□□ -0.57
NECAP1-218ENST00000639595 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
NECAP1-218ENST00000639595 MYOM1P52179 1685 aa11.48□□□□□ -0.57
NECAP1-218ENST00000639595 SLC52A1Q9NWF4 448 aa11.48□□□□□ -0.57
NECAP1-218ENST00000639595 PIK3C2BO00750 1634 aa11.48□□□□□ -0.57
NECAP1-218ENST00000639595 VGFO15240 615 aaPredicted RBP11.48□□□□□ -0.57
NECAP1-218ENST00000639595 ADAMTS8Q9UP79 889 aa11.48□□□□□ -0.57
NECAP1-218ENST00000639595 CAMSAP1Q5T5Y3 1602 aa11.48□□□□□ -0.57
NECAP1-218ENST00000639595 YEATS2Q9ULM3 1422 aa11.47□□□□□ -0.57
NECAP1-218ENST00000639595 KDM5AP29375 1690 aaKnown RBP11.47□□□□□ -0.57
NECAP1-218ENST00000639595 SENP3-EIF4A1A0A087X0R7 540 aa11.47□□□□□ -0.57
NECAP1-218ENST00000639595 B4GALNT3Q6L9W6 998 aa11.47□□□□□ -0.57
NECAP1-218ENST00000639595 PUS7Q96PZ0 661 aaKnown RBP11.47□□□□□ -0.57
NECAP1-218ENST00000639595 CARD14Q9BXL6 1004 aa11.47□□□□□ -0.57
NECAP1-218ENST00000639595 PPLO60437 1756 aa11.47□□□□□ -0.57
NECAP1-218ENST00000639595 ZFYVE9O95405 1425 aa11.47□□□□□ -0.57
NECAP1-218ENST00000639595 IDI1Q13907 227 aa11.46□□□□□ -0.58
NECAP1-218ENST00000639595 RCAN3Q9UKA8 241 aa11.46□□□□□ -0.58
NECAP1-218ENST00000639595 ZC3H13Q5T200 1668 aaKnown RBP11.45□□□□□ -0.58
NECAP1-218ENST00000639595 SIGLEC1Q9BZZ2 1709 aa11.45□□□□□ -0.58
NECAP1-218ENST00000639595 TRAK1Q9UPV9 953 aa11.45□□□□□ -0.58
NECAP1-218ENST00000639595 RRP1P56182 461 aaKnown RBP11.44□□□□□ -0.58
NECAP1-218ENST00000639595 NEXMIFQ5QGS0 1516 aa11.44□□□□□ -0.58
NECAP1-218ENST00000639595 FAM69CQ0P6D2 419 aa11.44□□□□□ -0.58
NECAP1-218ENST00000639595 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
NECAP1-218ENST00000639595 PPP6R1Q9UPN7 881 aa11.44□□□□□ -0.58
NECAP1-218ENST00000639595 WDR43Q15061 677 aaKnown RBP eCLIP11.43□□□□□ -0.58
NECAP1-218ENST00000639595 TMEM132EQ6IEE7 984 aa11.43□□□□□ -0.58
NECAP1-218ENST00000639595 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
NECAP1-218ENST00000639595 ZNF521Q96K83 1311 aa11.43□□□□□ -0.58
NECAP1-218ENST00000639595 DIP2BQ9P265 1576 aa11.41□□□□□ -0.58
NECAP1-218ENST00000639595 RIMBP3CA6NJZ7 1639 aa11.41□□□□□ -0.58
NECAP1-218ENST00000639595 RIMBP3BA6NNM3 1639 aa11.41□□□□□ -0.58
NECAP1-218ENST00000639595 RIMBP3Q9UFD9 1639 aa11.41□□□□□ -0.58
NECAP1-218ENST00000639595 CFAP65Q6ZU64 1925 aaKnown RBP11.41□□□□□ -0.58
NECAP1-218ENST00000639595 CCDC136Q96JN2 1154 aa11.4□□□□□ -0.58
NECAP1-218ENST00000639595 REREQ9P2R6 1566 aa11.4□□□□□ -0.58
NECAP1-218ENST00000639595 NGEFQ8N5V2 710 aa11.4□□□□□ -0.58
NECAP1-218ENST00000639595 SLC12A5Q9H2X9 1139 aa11.39□□□□□ -0.59
NECAP1-218ENST00000639595 AGLP35573 1532 aa11.39□□□□□ -0.59
NECAP1-218ENST00000639595 POLR3AO14802 1390 aaPredicted RBP11.39□□□□□ -0.59
NECAP1-218ENST00000639595 PLEKHH1Q9ULM0 1364 aa11.39□□□□□ -0.59
NECAP1-218ENST00000639595 EVC2Q86UK5 1308 aa11.39□□□□□ -0.59
NECAP1-218ENST00000639595 FANCIQ9NVI1 1328 aa11.38□□□□□ -0.59
NECAP1-218ENST00000639595 DUSP27Q5VZP5 1158 aa11.37□□□□□ -0.59
NECAP1-218ENST00000639595 TRMT2AQ8IZ69 625 aaKnown RBP11.37□□□□□ -0.59
NECAP1-218ENST00000639595 ARXQ96QS3 562 aa11.37□□□□□ -0.59
NECAP1-218ENST00000639595 NSD3Q9BZ95 1437 aa11.37□□□□□ -0.59
NECAP1-218ENST00000639595 TMEM131LA2VDJ0 1609 aa11.37□□□□□ -0.59
NECAP1-218ENST00000639595 QRICH2Q9H0J4 1663 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms