RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 NWD2Q9ULI1 1742 aa10.46□□□□□ -0.73
RTTN-215ENST00000639487 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
RTTN-215ENST00000639487 MYOM1P52179 1685 aa10.45□□□□□ -0.74
RTTN-215ENST00000639487 QSER1Q2KHR3 1735 aa10.45□□□□□ -0.74
RTTN-215ENST00000639487 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
RTTN-215ENST00000639487 ASXL1Q8IXJ9 1541 aa10.43□□□□□ -0.74
RTTN-215ENST00000639487 GPRASP1Q5JY77 1395 aa10.43□□□□□ -0.74
RTTN-215ENST00000639487 BRD4O60885 1362 aaPredicted RBP10.42□□□□□ -0.74
RTTN-215ENST00000639487 LMO7Q8WWI1 1683 aa10.42□□□□□ -0.74
RTTN-215ENST00000639487 ANKRD50Q9ULJ7 1429 aa10.42□□□□□ -0.74
RTTN-215ENST00000639487 SIRT1Q96EB6 747 aa10.41□□□□□ -0.74
RTTN-215ENST00000639487 MYT1Q01538 1121 aa10.41□□□□□ -0.74
RTTN-215ENST00000639487 SBNO2Q9Y2G9 1366 aa10.4□□□□□ -0.74
RTTN-215ENST00000639487 FAM135BQ49AJ0 1406 aa10.39□□□□□ -0.75
RTTN-215ENST00000639487 SCAF11Q99590 1463 aaKnown RBP10.39□□□□□ -0.75
RTTN-215ENST00000639487 PIK3C2GO75747 1445 aa10.38□□□□□ -0.75
RTTN-215ENST00000639487 RPGRIP1LQ68CZ1 1315 aa10.38□□□□□ -0.75
RTTN-215ENST00000639487 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
RTTN-215ENST00000639487 PLEKHG1Q9ULL1 1385 aa10.37□□□□□ -0.75
RTTN-215ENST00000639487 KIF20BQ96Q89 1820 aa10.37□□□□□ -0.75
RTTN-215ENST00000639487 PEAK1Q9H792 1746 aa10.37□□□□□ -0.75
RTTN-215ENST00000639487 KIF15Q9NS87 1388 aa10.36□□□□□ -0.75
RTTN-215ENST00000639487 RALGAPBQ86X10 1494 aa10.36□□□□□ -0.75
RTTN-215ENST00000639487 NRAPQ86VF7 1730 aa10.36□□□□□ -0.75
RTTN-215ENST00000639487 PARP4Q9UKK3 1724 aaKnown RBP10.36□□□□□ -0.75
RTTN-215ENST00000639487 SETD5Q9C0A6 1442 aa10.36□□□□□ -0.75
RTTN-215ENST00000639487 ADAMTS7Q9UKP4 1686 aa10.35□□□□□ -0.75
RTTN-215ENST00000639487 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
RTTN-215ENST00000639487 GLI3P10071 1580 aa10.31□□□□□ -0.76
RTTN-215ENST00000639487 PUS7Q96PZ0 661 aaKnown RBP10.31□□□□□ -0.76
RTTN-215ENST00000639487 CCDC144AA2RUR9 1427 aa10.3□□□□□ -0.76
RTTN-215ENST00000639487 ANKRD30BQ9BXX2 1392 aa10.28□□□□□ -0.76
RTTN-215ENST00000639487 COL16A1Q07092 1604 aaPredicted RBP10.28□□□□□ -0.76
RTTN-215ENST00000639487 ANKARQ7Z5J8 1434 aa10.28□□□□□ -0.76
RTTN-215ENST00000639487 KANK1Q14678 1352 aa10.27□□□□□ -0.76
RTTN-215ENST00000639487 FAM69CQ0P6D2 419 aa10.27□□□□□ -0.77
RTTN-215ENST00000639487 COL18A1P39060 1754 aa10.25□□□□□ -0.77
RTTN-215ENST00000639487 ADAMTS13Q76LX8 1427 aa10.25□□□□□ -0.77
RTTN-215ENST00000639487 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
RTTN-215ENST00000639487 RGPD1P0DJD0 1748 aa10.24□□□□□ -0.77
RTTN-215ENST00000639487 SLIT3O75094 1523 aa10.24□□□□□ -0.77
RTTN-215ENST00000639487 PIK3C2AO00443 1686 aa10.24□□□□□ -0.77
RTTN-215ENST00000639487 CYB5RLQ6IPT4 315 aa10.24□□□□□ -0.77
RTTN-215ENST00000639487 ZMYM3Q14202 1370 aa10.23□□□□□ -0.77
RTTN-215ENST00000639487 AEBP2Q6ZN18 517 aaPredicted RBP10.22□□□□□ -0.77
RTTN-215ENST00000639487 PKD2Q13563 968 aa10.22□□□□□ -0.77
RTTN-215ENST00000639487 TNRQ92752 1358 aa10.22□□□□□ -0.77
RTTN-215ENST00000639487 LRP6O75581 1613 aa10.22□□□□□ -0.77
RTTN-215ENST00000639487 SLC52A1Q9NWF4 448 aa10.21□□□□□ -0.78
RTTN-215ENST00000639487 CDK12Q9NYV4 1490 aaPredicted RBP10.21□□□□□ -0.78
RTTN-215ENST00000639487 TULP4Q9NRJ4 1543 aa10.2□□□□□ -0.78
RTTN-215ENST00000639487 N4BP2Q86UW6 1770 aaPredicted RBP10.2□□□□□ -0.78
RTTN-215ENST00000639487 PHLPP1O60346 1717 aa10.2□□□□□ -0.78
RTTN-215ENST00000639487 ATP7BP35670 1465 aa10.2□□□□□ -0.78
RTTN-215ENST00000639487 RREB1Q92766 1687 aa10.2□□□□□ -0.78
RTTN-215ENST00000639487 PKD1L3Q7Z443 1732 aa10.19□□□□□ -0.78
RTTN-215ENST00000639487 PRKCSHP14314 528 aaPredicted RBP10.19□□□□□ -0.78
RTTN-215ENST00000639487 TTBK1Q5TCY1 1321 aaPredicted RBP10.19□□□□□ -0.78
RTTN-215ENST00000639487 FBLN2P98095 1184 aa10.18□□□□□ -0.78
RTTN-215ENST00000639487 CFDP1Q9UEE9 299 aaPredicted RBP10.18□□□□□ -0.78
RTTN-215ENST00000639487 NUP155O75694 1391 aa10.18□□□□□ -0.78
RTTN-215ENST00000639487 TMEM2Q9UHN6 1383 aa10.18□□□□□ -0.78
RTTN-215ENST00000639487 KANK4Q5T7N3 995 aaPredicted RBP10.18□□□□□ -0.78
RTTN-215ENST00000639487 NINLQ9Y2I6 1382 aa10.17□□□□□ -0.78
RTTN-215ENST00000639487 PAPPAQ13219 1627 aa10.17□□□□□ -0.78
RTTN-215ENST00000639487 COL14A1Q05707 1796 aaKnown RBP10.17□□□□□ -0.78
RTTN-215ENST00000639487 THSD7AQ9UPZ6 1657 aa10.16□□□□□ -0.78
RTTN-215ENST00000639487 NCAPD2Q15021 1401 aa10.16□□□□□ -0.78
RTTN-215ENST00000639487 INSRP06213 1382 aa10.15□□□□□ -0.79
RTTN-215ENST00000639487 UBTFP17480 764 aaKnown RBP10.14□□□□□ -0.79
RTTN-215ENST00000639487 EIF3AQ14152 1382 aaKnown RBP10.14□□□□□ -0.79
RTTN-215ENST00000639487 SHANK3Q9BYB0 1731 aa10.14□□□□□ -0.79
RTTN-215ENST00000639487 VIRMAQ69YN4 1812 aaKnown RBP10.14□□□□□ -0.79
RTTN-215ENST00000639487 NPHP4O75161 1426 aaPredicted RBP10.14□□□□□ -0.79
RTTN-215ENST00000639487 SMG6Q86US8 1419 aaKnown RBP10.14□□□□□ -0.79
RTTN-215ENST00000639487 KDM4FA0A1W2PPD8 638 aa10.12□□□□□ -0.79
RTTN-215ENST00000639487 SIPA1L3O60292 1781 aaPredicted RBP10.12□□□□□ -0.79
RTTN-215ENST00000639487 ABCC11Q96J66 1382 aa10.12□□□□□ -0.79
RTTN-215ENST00000639487 PTPRUQ92729 1446 aa10.1□□□□□ -0.79
RTTN-215ENST00000639487 ROBO1Q9Y6N7 1651 aa10.1□□□□□ -0.79
RTTN-215ENST00000639487 LRRC37A3O60309 1634 aa10.09□□□□□ -0.79
RTTN-215ENST00000639487 ARID4BQ4LE39 1312 aaPredicted RBP10.09□□□□□ -0.79
RTTN-215ENST00000639487 LRPPRCP42704 1394 aaKnown RBP10.09□□□□□ -0.79
RTTN-215ENST00000639487 ADGRL3Q9HAR2 1447 aa10.08□□□□□ -0.8
RTTN-215ENST00000639487 RIMS2Q9UQ26 1411 aa10.07□□□□□ -0.8
RTTN-215ENST00000639487 DHX57Q6P158 1386 aaKnown RBP10.07□□□□□ -0.8
RTTN-215ENST00000639487 SSH2Q76I76 1423 aa10.07□□□□□ -0.8
RTTN-215ENST00000639487 RGPD8O14715 1765 aaPredicted RBP10.06□□□□□ -0.8
RTTN-215ENST00000639487 TMEM94Q12767 1356 aa10.06□□□□□ -0.8
RTTN-215ENST00000639487 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.06□□□□□ -0.8
RTTN-215ENST00000639487 RAB3GAP2Q9H2M9 1393 aa10.05□□□□□ -0.8
RTTN-215ENST00000639487 PXDNQ92626 1479 aa10.05□□□□□ -0.8
RTTN-215ENST00000639487 NPC1L1Q9UHC9 1359 aa10.05□□□□□ -0.8
RTTN-215ENST00000639487 BCL9O00512 1426 aa10.05□□□□□ -0.8
RTTN-215ENST00000639487 DMRT2Q9Y5R5 561 aa10.02□□□□□ -0.8
RTTN-215ENST00000639487 LTN1O94822 1766 aa10.02□□□□□ -0.81
RTTN-215ENST00000639487 KIF24Q5T7B8 1368 aa10.01□□□□□ -0.81
RTTN-215ENST00000639487 TSPY4P0CV99 314 aa10.01□□□□□ -0.81
RTTN-215ENST00000639487 TSPY10P0CW01 314 aa10.01□□□□□ -0.81
RTTN-215ENST00000639487 UBR2Q8IWV8 1755 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms