RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 LAMC1P11047 1609 aa6.42□□□□□ -1.38
CCDC7-213ENST00000639290 APLP1P51693 650 aa6.42□□□□□ -1.38
CCDC7-213ENST00000639290 SPON1Q9HCB6 807 aa6.42□□□□□ -1.38
CCDC7-213ENST00000639290 PPP1R1BQ9UD71 204 aaPredicted RBP6.42□□□□□ -1.38
CCDC7-213ENST00000639290 A2MP01023 1474 aa6.42□□□□□ -1.38
CCDC7-213ENST00000639290 ARHGAP35Q9NRY4 1499 aa6.42□□□□□ -1.38
CCDC7-213ENST00000639290 UBR1Q8IWV7 1749 aa6.42□□□□□ -1.38
CCDC7-213ENST00000639290 COL22A1Q8NFW1 1626 aaPredicted RBP6.41□□□□□ -1.38
CCDC7-213ENST00000639290 C8orf37Q96NL8 207 aa6.41□□□□□ -1.38
CCDC7-213ENST00000639290 USP21Q9UK80 565 aa6.41□□□□□ -1.38
CCDC7-213ENST00000639290 ARHGAP5Q13017 1502 aa6.41□□□□□ -1.38
CCDC7-213ENST00000639290 DCCP43146 1447 aa6.41□□□□□ -1.38
CCDC7-213ENST00000639290 PNPLA6Q8IY17 1366 aa6.41□□□□□ -1.38
CCDC7-213ENST00000639290 AFAP1Q8N556 730 aa6.41□□□□□ -1.38
CCDC7-213ENST00000639290 LRRC59Q96AG4 307 aaKnown RBP6.41□□□□□ -1.38
CCDC7-213ENST00000639290 INO80Q9ULG1 1556 aaPredicted RBP6.41□□□□□ -1.38
CCDC7-213ENST00000639290 DLC1Q96QB1 1528 aa6.4□□□□□ -1.38
CCDC7-213ENST00000639290 CROCC2H7BZ55 1655 aa6.4□□□□□ -1.38
CCDC7-213ENST00000639290 RREB1Q92766 1687 aa6.4□□□□□ -1.38
CCDC7-213ENST00000639290 FAM83GA6ND36 823 aa6.4□□□□□ -1.38
CCDC7-213ENST00000639290 COL13A1Q5TAT6 717 aaPredicted RBP6.4□□□□□ -1.38
CCDC7-213ENST00000639290 JMYQ8N9B5 988 aa6.4□□□□□ -1.38
CCDC7-213ENST00000639290 BRWD3Q6RI45 1802 aa6.4□□□□□ -1.39
CCDC7-213ENST00000639290 NEXMIFQ5QGS0 1516 aa6.4□□□□□ -1.39
CCDC7-213ENST00000639290 KIAA1210Q9ULL0 1709 aa6.39□□□□□ -1.39
CCDC7-213ENST00000639290 R3HDM1Q15032 1099 aaKnown RBP6.39□□□□□ -1.39
CCDC7-213ENST00000639290 NCOA2Q15596 1464 aa6.39□□□□□ -1.39
CCDC7-213ENST00000639290 TNS2Q63HR2 1409 aa6.39□□□□□ -1.39
CCDC7-213ENST00000639290 KCNQ2O43526 872 aa6.39□□□□□ -1.39
CCDC7-213ENST00000639290 CADPS2Q86UW7 1296 aa6.39□□□□□ -1.39
CCDC7-213ENST00000639290 PROSER2Q86WR7 435 aaPredicted RBP6.39□□□□□ -1.39
CCDC7-213ENST00000639290 MYT1LQ9UL68 1186 aa6.39□□□□□ -1.39
CCDC7-213ENST00000639290 MAP3K5Q99683 1374 aa6.39□□□□□ -1.39
CCDC7-213ENST00000639290 MARF1Q9Y4F3 1742 aaKnown RBP6.39□□□□□ -1.39
CCDC7-213ENST00000639290 ASXL1Q8IXJ9 1541 aa6.38□□□□□ -1.39
CCDC7-213ENST00000639290 PREX2Q70Z35 1606 aa6.38□□□□□ -1.39
CCDC7-213ENST00000639290 TNS1Q9HBL0 1735 aaKnown RBP6.37□□□□□ -1.39
CCDC7-213ENST00000639290 TET3O43151 1660 aa6.37□□□□□ -1.39
CCDC7-213ENST00000639290 RPRD2Q5VT52 1461 aaKnown RBP6.37□□□□□ -1.39
CCDC7-213ENST00000639290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.37□□□□□ -1.39
CCDC7-213ENST00000639290 HNRNPUL2Q1KMD3 747 aaKnown RBP6.37□□□□□ -1.39
CCDC7-213ENST00000639290 GJD4Q96KN9 370 aaPredicted RBP6.37□□□□□ -1.39
CCDC7-213ENST00000639290 WWC3Q9ULE0 1092 aa6.37□□□□□ -1.39
CCDC7-213ENST00000639290 MAST1Q9Y2H9 1570 aa6.36□□□□□ -1.39
CCDC7-213ENST00000639290 GLI3P10071 1580 aa6.36□□□□□ -1.39
CCDC7-213ENST00000639290 ARID3CA6NKF2 412 aa6.36□□□□□ -1.39
CCDC7-213ENST00000639290 U3KPZ7 1027 aaPredicted RBP6.36□□□□□ -1.39
CCDC7-213ENST00000639290 PPP1R15AO75807 674 aaPredicted RBP6.35□□□□□ -1.39
CCDC7-213ENST00000639290 DNAJC5GQ8N7S2 189 aa6.35□□□□□ -1.39
CCDC7-213ENST00000639290 SYCP2Q9BX26 1530 aa6.35□□□□□ -1.39
CCDC7-213ENST00000639290 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.35□□□□□ -1.39
CCDC7-213ENST00000639290 CDC42BPBQ9Y5S2 1711 aa6.35□□□□□ -1.39
CCDC7-213ENST00000639290 EID1Q9Y6B2 187 aa6.35□□□□□ -1.39
CCDC7-213ENST00000639290 NUP188Q5SRE5 1749 aa6.34□□□□□ -1.39
CCDC7-213ENST00000639290 ONECUT3O60422 494 aaPredicted RBP6.34□□□□□ -1.39
CCDC7-213ENST00000639290 PLEKHH2Q8IVE3 1493 aa6.34□□□□□ -1.39
CCDC7-213ENST00000639290 CHD2O14647 1828 aaKnown RBP6.34□□□□□ -1.39
CCDC7-213ENST00000639290 NRKQ7Z2Y5 1582 aa6.34□□□□□ -1.4
CCDC7-213ENST00000639290 ABCC5O15440 1437 aa6.33□□□□□ -1.4
CCDC7-213ENST00000639290 NBPF8Q3BBV2 869 aa6.33□□□□□ -1.4
CCDC7-213ENST00000639290 NBPF14Q5TI25 921 aa6.33□□□□□ -1.4
CCDC7-213ENST00000639290 CASZ1Q86V15 1759 aa6.33□□□□□ -1.4
CCDC7-213ENST00000639290 APLP2Q06481 763 aa6.33□□□□□ -1.4
CCDC7-213ENST00000639290 FMN1Q68DA7 1419 aa6.33□□□□□ -1.4
CCDC7-213ENST00000639290 WDR90Q96KV7 1748 aa6.32□□□□□ -1.4
CCDC7-213ENST00000639290 PTPN23Q9H3S7 1636 aa6.32□□□□□ -1.4
CCDC7-213ENST00000639290 ERVK-7P63135 1459 aa6.32□□□□□ -1.4
CCDC7-213ENST00000639290 ADGRB3O60242 1522 aa6.32□□□□□ -1.4
CCDC7-213ENST00000639290 RGPD3A6NKT7 1758 aaPredicted RBP6.31□□□□□ -1.4
CCDC7-213ENST00000639290 RGPD4Q7Z3J3 1758 aa6.31□□□□□ -1.4
CCDC7-213ENST00000639290 SLC24A1O60721 1099 aa6.31□□□□□ -1.4
CCDC7-213ENST00000639290 RGS19P49795 217 aa6.31□□□□□ -1.4
CCDC7-213ENST00000639290 BRINP3Q76B58 766 aa6.31□□□□□ -1.4
CCDC7-213ENST00000639290 CLIP1P30622 1438 aa6.31□□□□□ -1.4
CCDC7-213ENST00000639290 KIAA1107Q9UPP5 1409 aa6.31□□□□□ -1.4
CCDC7-213ENST00000639290 C19orf44Q9H6X5 657 aa6.31□□□□□ -1.4
CCDC7-213ENST00000639290 TMEM131LA2VDJ0 1609 aa6.3□□□□□ -1.4
CCDC7-213ENST00000639290 MYOM2P54296 1465 aa6.3□□□□□ -1.4
CCDC7-213ENST00000639290 SPAG9O60271 1321 aaKnown RBP6.3□□□□□ -1.4
CCDC7-213ENST00000639290 KRT27Q7Z3Y8 459 aa6.3□□□□□ -1.4
CCDC7-213ENST00000639290 TXNDC2Q86VQ3 553 aa6.3□□□□□ -1.4
CCDC7-213ENST00000639290 MYOM1P52179 1685 aa6.3□□□□□ -1.4
CCDC7-213ENST00000639290 ATF3P18847 181 aa6.3□□□□□ -1.4
CCDC7-213ENST00000639290 KLRG1Q96E93 195 aa6.3□□□□□ -1.4
CCDC7-213ENST00000639290 SLIT2O94813 1529 aa6.29□□□□□ -1.4
CCDC7-213ENST00000639290 PIK3R4Q99570 1358 aa6.29□□□□□ -1.4
CCDC7-213ENST00000639290 CDK11AQ9UQ88 783 aaPredicted RBP6.29□□□□□ -1.4
CCDC7-213ENST00000639290 TROQ12816 1431 aaPredicted RBP6.29□□□□□ -1.4
CCDC7-213ENST00000639290 NWD2Q9ULI1 1742 aa6.29□□□□□ -1.4
CCDC7-213ENST00000639290 TMEM2Q9UHN6 1383 aa6.29□□□□□ -1.4
CCDC7-213ENST00000639290 CAMKK2Q96RR4 588 aa6.29□□□□□ -1.4
CCDC7-213ENST00000639290 FYCO1Q9BQS8 1478 aa6.29□□□□□ -1.4
CCDC7-213ENST00000639290 SLC4A2P04920 1241 aa6.28□□□□□ -1.4
CCDC7-213ENST00000639290 FBXO31Q5XUX0 539 aaPredicted RBP6.28□□□□□ -1.4
CCDC7-213ENST00000639290 GGT6Q6P531 493 aa6.28□□□□□ -1.4
CCDC7-213ENST00000639290 LTKP29376 864 aa6.27□□□□□ -1.41
CCDC7-213ENST00000639290 MLLT1Q03111 559 aaPredicted RBP6.27□□□□□ -1.41
CCDC7-213ENST00000639290 EN1Q05925 392 aaPredicted RBP6.27□□□□□ -1.41
CCDC7-213ENST00000639290 DHX29Q7Z478 1369 aaKnown RBP6.27□□□□□ -1.41
CCDC7-213ENST00000639290 USP32Q8NFA0 1604 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 476.6 ms