RNA–Protein interactions for RNA: ENST00000639070.1

GABRD-208, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 2,171 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-208ENST00000639070 NRXN1Q9ULB1 1477 aa22.31■■□□□ 1.16
GABRD-208ENST00000639070 ADGRF5Q8IZF2 1346 aa22.3■■□□□ 1.16
GABRD-208ENST00000639070 PIK3C2BO00750 1634 aa22.3■■□□□ 1.16
GABRD-208ENST00000639070 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
GABRD-208ENST00000639070 REREQ9P2R6 1566 aa22.28■■□□□ 1.16
GABRD-208ENST00000639070 PPLO60437 1756 aa22.28■■□□□ 1.16
GABRD-208ENST00000639070 CHGAP10645 457 aaKnown RBP22.26■■□□□ 1.15
GABRD-208ENST00000639070 MRS2Q9HD23 443 aa22.26■■□□□ 1.15
GABRD-208ENST00000639070 TMF1P82094 1093 aa22.25■■□□□ 1.15
GABRD-208ENST00000639070 CFAP70Q5T0N1 1121 aa22.25■■□□□ 1.15
GABRD-208ENST00000639070 AGLP35573 1532 aa22.24■■□□□ 1.15
GABRD-208ENST00000639070 CNGB1Q14028 1251 aaPredicted RBP22.23■■□□□ 1.15
GABRD-208ENST00000639070 PREX1Q8TCU6 1659 aa22.22■■□□□ 1.15
GABRD-208ENST00000639070 HNRNPUQ00839 825 aaKnown RBP eCLIP22.21■■□□□ 1.15
GABRD-208ENST00000639070 PIK3C2GO75747 1445 aa22.2■■□□□ 1.14
GABRD-208ENST00000639070 EIF3AQ14152 1382 aaKnown RBP22.2■■□□□ 1.14
GABRD-208ENST00000639070 RPGRIP1LQ68CZ1 1315 aa22.2■■□□□ 1.14
GABRD-208ENST00000639070 ARHGEF40Q8TER5 1519 aa22.18■■□□□ 1.14
GABRD-208ENST00000639070 SETBP1Q9Y6X0 1596 aa22.18■■□□□ 1.14
GABRD-208ENST00000639070 PER1O15534 1290 aaPredicted RBP22.18■■□□□ 1.14
GABRD-208ENST00000639070 FAM9BQ8IZU0 186 aa22.18■■□□□ 1.14
GABRD-208ENST00000639070 NEXMIFQ5QGS0 1516 aa22.17■■□□□ 1.14
GABRD-208ENST00000639070 KTN1Q86UP2 1357 aaKnown RBP22.17■■□□□ 1.14
GABRD-208ENST00000639070 IDI1Q13907 227 aa22.16■■□□□ 1.14
GABRD-208ENST00000639070 SLC52A1Q9NWF4 448 aa22.14■■□□□ 1.13
GABRD-208ENST00000639070 MYO3AQ8NEV4 1616 aa22.14■■□□□ 1.13
GABRD-208ENST00000639070 RALBP1Q15311 655 aa22.14■■□□□ 1.13
GABRD-208ENST00000639070 C14orf93Q9H972 538 aaKnown RBP22.13■■□□□ 1.13
GABRD-208ENST00000639070 PANK3Q9H999 370 aa22.13■■□□□ 1.13
GABRD-208ENST00000639070 ADGRB1O14514 1584 aa22.13■■□□□ 1.13
GABRD-208ENST00000639070 CLTCQ00610 1675 aaKnown RBP22.12■■□□□ 1.13
GABRD-208ENST00000639070 ERVK-7P63135 1459 aa22.12■■□□□ 1.13
GABRD-208ENST00000639070 PPP6R1Q9UPN7 881 aa22.12■■□□□ 1.13
GABRD-208ENST00000639070 MYO5BQ9ULV0 1848 aa22.12■■□□□ 1.13
GABRD-208ENST00000639070 TMEM131LA2VDJ0 1609 aa22.11■■□□□ 1.13
GABRD-208ENST00000639070 PARD3Q8TEW0 1356 aa22.11■■□□□ 1.13
GABRD-208ENST00000639070 MYBBP1AQ9BQG0 1328 aaKnown RBP22.11■■□□□ 1.13
GABRD-208ENST00000639070 CDCA8Q53HL2 280 aa22.1■■□□□ 1.13
GABRD-208ENST00000639070 FBXO31Q5XUX0 539 aaPredicted RBP22.1■■□□□ 1.13
GABRD-208ENST00000639070 MYOM1P52179 1685 aa22.1■■□□□ 1.13
GABRD-208ENST00000639070 KDM5AP29375 1690 aaKnown RBP22.08■■□□□ 1.13
GABRD-208ENST00000639070 BRD4O60885 1362 aaPredicted RBP22.07■■□□□ 1.12
GABRD-208ENST00000639070 VGFO15240 615 aaPredicted RBP22.07■■□□□ 1.12
GABRD-208ENST00000639070 NUTM2DQ5VT03 806 aaPredicted RBP22.07■■□□□ 1.12
GABRD-208ENST00000639070 ZFYVE9O95405 1425 aa22.06■■□□□ 1.12
GABRD-208ENST00000639070 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
GABRD-208ENST00000639070 SBNO2Q9Y2G9 1366 aa22.06■■□□□ 1.12
GABRD-208ENST00000639070 TMC1Q8TDI8 760 aa22.05■■□□□ 1.12
GABRD-208ENST00000639070 PNISRQ8TF01 805 aaKnown RBP22.05■■□□□ 1.12
GABRD-208ENST00000639070 MLECQ14165 292 aa22.04■■□□□ 1.12
GABRD-208ENST00000639070 SPATA31D1Q6ZQQ2 1576 aa22.04■■□□□ 1.12
GABRD-208ENST00000639070 SLC24A1O60721 1099 aa22.04■■□□□ 1.12
GABRD-208ENST00000639070 TMEM132EQ6IEE7 984 aa22.04■■□□□ 1.12
GABRD-208ENST00000639070 ZBED9Q6R2W3 1325 aa22.03■■□□□ 1.12
GABRD-208ENST00000639070 TRAK1Q9UPV9 953 aa22.02■■□□□ 1.12
GABRD-208ENST00000639070 CENPJQ9HC77 1338 aaPredicted RBP22.02■■□□□ 1.12
GABRD-208ENST00000639070 CC2D1BQ5T0F9 858 aaKnown RBP22.02■■□□□ 1.12
GABRD-208ENST00000639070 QRICH2Q9H0J4 1663 aa22.02■■□□□ 1.12
GABRD-208ENST00000639070 NLRP13Q86W25 1043 aa22.01■■□□□ 1.11
GABRD-208ENST00000639070 LRPPRCP42704 1394 aaKnown RBP21.99■■□□□ 1.11
GABRD-208ENST00000639070 ARHGEF28Q8N1W1 1705 aaKnown RBP21.98■■□□□ 1.11
GABRD-208ENST00000639070 ASXL1Q8IXJ9 1541 aa21.98■■□□□ 1.11
GABRD-208ENST00000639070 KNSTRNQ9Y448 316 aa21.96■■□□□ 1.11
GABRD-208ENST00000639070 AMER1Q5JTC6 1135 aaPredicted RBP21.95■■□□□ 1.1
GABRD-208ENST00000639070 A2ML1A8K2U0 1454 aa21.94■■□□□ 1.1
GABRD-208ENST00000639070 ZMYM3Q14202 1370 aa21.92■■□□□ 1.1
GABRD-208ENST00000639070 STAG3Q9UJ98 1225 aa21.92■■□□□ 1.1
GABRD-208ENST00000639070 FKBP8Q14318 412 aa21.91■■□□□ 1.1
GABRD-208ENST00000639070 NPC1L1Q9UHC9 1359 aa21.91■■□□□ 1.1
GABRD-208ENST00000639070 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.1
GABRD-208ENST00000639070 ESF1Q9H501 851 aaKnown RBP21.89■■□□□ 1.1
GABRD-208ENST00000639070 ALKQ9UM73 1620 aa21.88■■□□□ 1.09
GABRD-208ENST00000639070 TULP4Q9NRJ4 1543 aa21.88■■□□□ 1.09
GABRD-208ENST00000639070 NEFLP07196 543 aa21.87■■□□□ 1.09
GABRD-208ENST00000639070 CARD14Q9BXL6 1004 aa21.87■■□□□ 1.09
GABRD-208ENST00000639070 RIMS2Q9UQ26 1411 aa21.86■■□□□ 1.09
GABRD-208ENST00000639070 PTPRMP28827 1452 aa21.85■■□□□ 1.09
GABRD-208ENST00000639070 PPP2R1AP30153 589 aa21.85■■□□□ 1.09
GABRD-208ENST00000639070 YTHDC2Q9H6S0 1430 aaKnown RBP21.85■■□□□ 1.09
GABRD-208ENST00000639070 STK26Q9P289 416 aa21.84■■□□□ 1.09
GABRD-208ENST00000639070 EVC2Q86UK5 1308 aa21.82■■□□□ 1.08
GABRD-208ENST00000639070 SETD1AO15047 1707 aaKnown RBP21.82■■□□□ 1.08
GABRD-208ENST00000639070 SENP3-EIF4A1A0A087X0R7 540 aa21.81■■□□□ 1.08
GABRD-208ENST00000639070 PUS7Q96PZ0 661 aaKnown RBP21.81■■□□□ 1.08
GABRD-208ENST00000639070 TNRQ92752 1358 aa21.81■■□□□ 1.08
GABRD-208ENST00000639070 SMG6Q86US8 1419 aaKnown RBP21.8■■□□□ 1.08
GABRD-208ENST00000639070 INSRP06213 1382 aa21.8■■□□□ 1.08
GABRD-208ENST00000639070 SLC12A5Q9H2X9 1139 aa21.8■■□□□ 1.08
GABRD-208ENST00000639070 SAFB2Q14151 953 aaKnown RBP eCLIP21.79■■□□□ 1.08
GABRD-208ENST00000639070 BCANQ96GW7 911 aa21.78■■□□□ 1.08
GABRD-208ENST00000639070 BLMP54132 1417 aaPredicted RBP21.78■■□□□ 1.08
GABRD-208ENST00000639070 NRXN3Q9Y4C0 1643 aa21.78■■□□□ 1.08
GABRD-208ENST00000639070 NSD3Q9BZ95 1437 aa21.77■■□□□ 1.08
GABRD-208ENST00000639070 PRAM1Q96QH2 718 aa21.76■■□□□ 1.07
GABRD-208ENST00000639070 UBR1Q8IWV7 1749 aa21.76■■□□□ 1.07
GABRD-208ENST00000639070 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
GABRD-208ENST00000639070 USP32Q8NFA0 1604 aa21.75■■□□□ 1.07
GABRD-208ENST00000639070 CABP2Q9NPB3 220 aa21.75■■□□□ 1.07
GABRD-208ENST00000639070 NUDCQ9Y266 331 aa21.75■■□□□ 1.07
GABRD-208ENST00000639070 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms