RNA–Protein interactions for RNA: ENST00000638963.1

PAX6-246, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-246ENST00000638963 NEURL4Q96JN8 1562 aa13.88□□□□□ -0.19
PAX6-246ENST00000638963 HSPA2P54652 639 aa13.88□□□□□ -0.19
PAX6-246ENST00000638963 KDM2AQ9Y2K7 1162 aa13.88□□□□□ -0.19
PAX6-246ENST00000638963 RIMS2Q9UQ26 1411 aa13.87□□□□□ -0.19
PAX6-246ENST00000638963 DCAF11Q8TEB1 546 aa13.87□□□□□ -0.19
PAX6-246ENST00000638963 TMEM2Q9UHN6 1383 aa13.86□□□□□ -0.19
PAX6-246ENST00000638963 ZFYVE9O95405 1425 aa13.86□□□□□ -0.19
PAX6-246ENST00000638963 THEMISQ8N1K5 641 aaPredicted RBP13.84□□□□□ -0.19
PAX6-246ENST00000638963 ARHGAP23Q9P227 1491 aa13.84□□□□□ -0.19
PAX6-246ENST00000638963 SLIT1O75093 1534 aa13.84□□□□□ -0.19
PAX6-246ENST00000638963 LTKP29376 864 aa13.83□□□□□ -0.19
PAX6-246ENST00000638963 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.19
PAX6-246ENST00000638963 MYOM2P54296 1465 aa13.81□□□□□ -0.2
PAX6-246ENST00000638963 RPGRIP1LQ68CZ1 1315 aa13.81□□□□□ -0.2
PAX6-246ENST00000638963 NCKAP5LQ9HCH0 1330 aa13.81□□□□□ -0.2
PAX6-246ENST00000638963 PPP1R15AO75807 674 aaPredicted RBP13.81□□□□□ -0.2
PAX6-246ENST00000638963 TXNDC2Q86VQ3 553 aa13.81□□□□□ -0.2
PAX6-246ENST00000638963 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
PAX6-246ENST00000638963 IQGAP1P46940 1657 aa13.8□□□□□ -0.2
PAX6-246ENST00000638963 NBPF8Q3BBV2 869 aa13.8□□□□□ -0.2
PAX6-246ENST00000638963 SCAF11Q99590 1463 aaKnown RBP13.8□□□□□ -0.2
PAX6-246ENST00000638963 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
PAX6-246ENST00000638963 NRXN3Q9Y4C0 1643 aa13.79□□□□□ -0.2
PAX6-246ENST00000638963 STRCQ7RTU9 1775 aa13.79□□□□□ -0.2
PAX6-246ENST00000638963 NRXN1Q9ULB1 1477 aa13.79□□□□□ -0.2
PAX6-246ENST00000638963 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
PAX6-246ENST00000638963 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
PAX6-246ENST00000638963 ANKLE2Q86XL3 938 aa13.77□□□□□ -0.21
PAX6-246ENST00000638963 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.77□□□□□ -0.21
PAX6-246ENST00000638963 TIMELESSQ9UNS1 1208 aa13.77□□□□□ -0.21
PAX6-246ENST00000638963 PIK3C2GO75747 1445 aa13.77□□□□□ -0.21
PAX6-246ENST00000638963 BCANQ96GW7 911 aa13.76□□□□□ -0.21
PAX6-246ENST00000638963 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
PAX6-246ENST00000638963 PLEKHG1Q9ULL1 1385 aa13.75□□□□□ -0.21
PAX6-246ENST00000638963 TRPM1Q7Z4N2 1603 aa13.75□□□□□ -0.21
PAX6-246ENST00000638963 SETD1AO15047 1707 aaKnown RBP13.74□□□□□ -0.21
PAX6-246ENST00000638963 SETBP1Q9Y6X0 1596 aa13.74□□□□□ -0.21
PAX6-246ENST00000638963 NPHP4O75161 1426 aaPredicted RBP13.74□□□□□ -0.21
PAX6-246ENST00000638963 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
PAX6-246ENST00000638963 HDGFP51858 240 aaKnown RBP13.74□□□□□ -0.21
PAX6-246ENST00000638963 SLC26A8Q96RN1 970 aa13.74□□□□□ -0.21
PAX6-246ENST00000638963 ADAMTS13Q76LX8 1427 aa13.73□□□□□ -0.21
PAX6-246ENST00000638963 NBPF1Q3BBV0 1214 aa13.73□□□□□ -0.21
PAX6-246ENST00000638963 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
PAX6-246ENST00000638963 MED14O60244 1454 aa13.72□□□□□ -0.21
PAX6-246ENST00000638963 ZEB1P37275 1124 aaPredicted RBP13.71□□□□□ -0.21
PAX6-246ENST00000638963 TMEM132EQ6IEE7 984 aa13.71□□□□□ -0.21
PAX6-246ENST00000638963 RALGAPBQ86X10 1494 aa13.71□□□□□ -0.21
PAX6-246ENST00000638963 KIAA1210Q9ULL0 1709 aa13.71□□□□□ -0.22
PAX6-246ENST00000638963 LAMC1P11047 1609 aa13.71□□□□□ -0.22
PAX6-246ENST00000638963 STAC3Q96MF2 364 aa13.71□□□□□ -0.22
PAX6-246ENST00000638963 METP08581 1390 aa13.7□□□□□ -0.22
PAX6-246ENST00000638963 C14orf93Q9H972 538 aaKnown RBP13.7□□□□□ -0.22
PAX6-246ENST00000638963 ADGRB1O14514 1584 aa13.69□□□□□ -0.22
PAX6-246ENST00000638963 ROCK2O75116 1388 aaKnown RBP13.68□□□□□ -0.22
PAX6-246ENST00000638963 DIP2AQ14689 1571 aa13.68□□□□□ -0.22
PAX6-246ENST00000638963 PTPRUQ92729 1446 aa13.66□□□□□ -0.22
PAX6-246ENST00000638963 STK26Q9P289 416 aa13.66□□□□□ -0.22
PAX6-246ENST00000638963 TBX22Q9Y458 520 aa13.66□□□□□ -0.22
PAX6-246ENST00000638963 STRCP1A6NGW2 1772 aa13.64□□□□□ -0.23
PAX6-246ENST00000638963 CARD11Q9BXL7 1154 aa13.64□□□□□ -0.23
PAX6-246ENST00000638963 CHD2O14647 1828 aaKnown RBP13.64□□□□□ -0.23
PAX6-246ENST00000638963 GPRASP1Q5JY77 1395 aa13.63□□□□□ -0.23
PAX6-246ENST00000638963 YTHDC2Q9H6S0 1430 aaKnown RBP13.63□□□□□ -0.23
PAX6-246ENST00000638963 XRN1Q8IZH2 1706 aaKnown RBP13.62□□□□□ -0.23
PAX6-246ENST00000638963 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
PAX6-246ENST00000638963 ARHGEF28Q8N1W1 1705 aaKnown RBP13.62□□□□□ -0.23
PAX6-246ENST00000638963 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
PAX6-246ENST00000638963 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
PAX6-246ENST00000638963 AMOTL2Q9Y2J4 779 aa13.61□□□□□ -0.23
PAX6-246ENST00000638963 KNDC1Q76NI1 1749 aa13.61□□□□□ -0.23
PAX6-246ENST00000638963 ZNF335Q9H4Z2 1342 aaPredicted RBP13.6□□□□□ -0.23
PAX6-246ENST00000638963 KCNA6P17658 529 aa13.6□□□□□ -0.23
PAX6-246ENST00000638963 HIRIP3Q9BW71 556 aaPredicted RBP13.6□□□□□ -0.23
PAX6-246ENST00000638963 USP47Q96K76 1375 aa13.59□□□□□ -0.23
PAX6-246ENST00000638963 ROBO2Q9HCK4 1378 aa13.59□□□□□ -0.23
PAX6-246ENST00000638963 RBM33Q96EV2 1170 aaKnown RBP13.59□□□□□ -0.23
PAX6-246ENST00000638963 NWD1Q149M9 1564 aa13.59□□□□□ -0.23
PAX6-246ENST00000638963 PLEKHH1Q9ULM0 1364 aa13.59□□□□□ -0.23
PAX6-246ENST00000638963 CPS1P31327 1500 aa13.58□□□□□ -0.23
PAX6-246ENST00000638963 PIK3R4Q99570 1358 aa13.58□□□□□ -0.24
PAX6-246ENST00000638963 HSPA5P11021 654 aaKnown RBP13.58□□□□□ -0.24
PAX6-246ENST00000638963 SAFB2Q14151 953 aaKnown RBP eCLIP13.58□□□□□ -0.24
PAX6-246ENST00000638963 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.24
PAX6-246ENST00000638963 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
PAX6-246ENST00000638963 ABCC11Q96J66 1382 aa13.57□□□□□ -0.24
PAX6-246ENST00000638963 QRICH2Q9H0J4 1663 aa13.57□□□□□ -0.24
PAX6-246ENST00000638963 PRAM1Q96QH2 718 aa13.57□□□□□ -0.24
PAX6-246ENST00000638963 TECPR2O15040 1411 aa13.57□□□□□ -0.24
PAX6-246ENST00000638963 DLC1Q96QB1 1528 aa13.56□□□□□ -0.24
PAX6-246ENST00000638963 ST20-MTHFSA0A0A6YYL1 179 aa13.55□□□□□ -0.24
PAX6-246ENST00000638963 PTCH1Q13635 1447 aa13.54□□□□□ -0.24
PAX6-246ENST00000638963 EIF4G2P78344 907 aaKnown RBP eCLIP13.54□□□□□ -0.24
PAX6-246ENST00000638963 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.54□□□□□ -0.24
PAX6-246ENST00000638963 POGKQ9P215 609 aa13.54□□□□□ -0.24
PAX6-246ENST00000638963 XIRP1Q702N8 1843 aaKnown RBP13.53□□□□□ -0.24
PAX6-246ENST00000638963 EIF3AQ14152 1382 aaKnown RBP13.53□□□□□ -0.24
PAX6-246ENST00000638963 NKTRP30414 1462 aaKnown RBP13.53□□□□□ -0.24
PAX6-246ENST00000638963 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.24
PAX6-246ENST00000638963 CENPJQ9HC77 1338 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms