RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 NPHP4O75161 1426 aaPredicted RBP13.07□□□□□ -0.32
NECAP1-212ENST00000638787 ZFYVE9O95405 1425 aa13.07□□□□□ -0.32
NECAP1-212ENST00000638787 RIMS2Q9UQ26 1411 aa13.06□□□□□ -0.32
NECAP1-212ENST00000638787 IQGAP1P46940 1657 aa13.06□□□□□ -0.32
NECAP1-212ENST00000638787 ANKRD30BQ9BXX2 1392 aa13.04□□□□□ -0.32
NECAP1-212ENST00000638787 ZNF326Q5BKZ1 582 aaKnown RBP13.03□□□□□ -0.32
NECAP1-212ENST00000638787 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
NECAP1-212ENST00000638787 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
NECAP1-212ENST00000638787 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
NECAP1-212ENST00000638787 NEXMIFQ5QGS0 1516 aa13.01□□□□□ -0.33
NECAP1-212ENST00000638787 NUTM2DQ5VT03 806 aaPredicted RBP13.01□□□□□ -0.33
NECAP1-212ENST00000638787 PCGF6Q9BYE7 350 aa13.01□□□□□ -0.33
NECAP1-212ENST00000638787 PLEKHG1Q9ULL1 1385 aa13.01□□□□□ -0.33
NECAP1-212ENST00000638787 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
NECAP1-212ENST00000638787 PPLO60437 1756 aa12.99□□□□□ -0.33
NECAP1-212ENST00000638787 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
NECAP1-212ENST00000638787 DHX57Q6P158 1386 aaKnown RBP12.98□□□□□ -0.33
NECAP1-212ENST00000638787 RPGRIP1LQ68CZ1 1315 aa12.98□□□□□ -0.33
NECAP1-212ENST00000638787 BCANQ96GW7 911 aa12.98□□□□□ -0.33
NECAP1-212ENST00000638787 RGL3Q3MIN7 710 aa12.97□□□□□ -0.33
NECAP1-212ENST00000638787 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
NECAP1-212ENST00000638787 SLC26A8Q96RN1 970 aa12.97□□□□□ -0.33
NECAP1-212ENST00000638787 IFT172Q9UG01 1749 aa12.96□□□□□ -0.34
NECAP1-212ENST00000638787 SETBP1Q9Y6X0 1596 aa12.95□□□□□ -0.34
NECAP1-212ENST00000638787 NRXN3Q9Y4C0 1643 aa12.95□□□□□ -0.34
NECAP1-212ENST00000638787 DIP2AQ14689 1571 aa12.95□□□□□ -0.34
NECAP1-212ENST00000638787 ADAMTS13Q76LX8 1427 aa12.95□□□□□ -0.34
NECAP1-212ENST00000638787 VGFO15240 615 aaPredicted RBP12.94□□□□□ -0.34
NECAP1-212ENST00000638787 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
NECAP1-212ENST00000638787 TBX22Q9Y458 520 aa12.93□□□□□ -0.34
NECAP1-212ENST00000638787 CPS1P31327 1500 aa12.93□□□□□ -0.34
NECAP1-212ENST00000638787 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
NECAP1-212ENST00000638787 ADGRF5Q8IZF2 1346 aa12.91□□□□□ -0.34
NECAP1-212ENST00000638787 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
NECAP1-212ENST00000638787 MYOM2P54296 1465 aa12.9□□□□□ -0.34
NECAP1-212ENST00000638787 CHD2O14647 1828 aaKnown RBP12.9□□□□□ -0.34
NECAP1-212ENST00000638787 KCNA6P17658 529 aa12.9□□□□□ -0.34
NECAP1-212ENST00000638787 SETD1AO15047 1707 aaKnown RBP12.89□□□□□ -0.35
NECAP1-212ENST00000638787 PIK3R4Q99570 1358 aa12.89□□□□□ -0.35
NECAP1-212ENST00000638787 ALKQ9UM73 1620 aa12.89□□□□□ -0.35
NECAP1-212ENST00000638787 SIN3AQ96ST3 1273 aa12.89□□□□□ -0.35
NECAP1-212ENST00000638787 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
NECAP1-212ENST00000638787 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
NECAP1-212ENST00000638787 IQSEC2Q5JU85 1478 aa12.87□□□□□ -0.35
NECAP1-212ENST00000638787 LRRC7Q96NW7 1537 aa12.87□□□□□ -0.35
NECAP1-212ENST00000638787 DCAF11Q8TEB1 546 aa12.87□□□□□ -0.35
NECAP1-212ENST00000638787 METP08581 1390 aa12.87□□□□□ -0.35
NECAP1-212ENST00000638787 NKTRP30414 1462 aaKnown RBP12.87□□□□□ -0.35
NECAP1-212ENST00000638787 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
NECAP1-212ENST00000638787 NEUROD1Q13562 356 aa12.86□□□□□ -0.35
NECAP1-212ENST00000638787 KDM2AQ9Y2K7 1162 aa12.85□□□□□ -0.35
NECAP1-212ENST00000638787 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
NECAP1-212ENST00000638787 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
NECAP1-212ENST00000638787 XIRP1Q702N8 1843 aaKnown RBP12.84□□□□□ -0.35
NECAP1-212ENST00000638787 AMOTL2Q9Y2J4 779 aa12.84□□□□□ -0.35
NECAP1-212ENST00000638787 LAMC1P11047 1609 aa12.83□□□□□ -0.35
NECAP1-212ENST00000638787 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.36
NECAP1-212ENST00000638787 ASXL1Q8IXJ9 1541 aa12.83□□□□□ -0.36
NECAP1-212ENST00000638787 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
NECAP1-212ENST00000638787 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
NECAP1-212ENST00000638787 C14orf93Q9H972 538 aaKnown RBP12.82□□□□□ -0.36
NECAP1-212ENST00000638787 CFAP70Q5T0N1 1121 aa12.81□□□□□ -0.36
NECAP1-212ENST00000638787 RBM33Q96EV2 1170 aaKnown RBP12.81□□□□□ -0.36
NECAP1-212ENST00000638787 PTCH1Q13635 1447 aa12.79□□□□□ -0.36
NECAP1-212ENST00000638787 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
NECAP1-212ENST00000638787 TMEM132EQ6IEE7 984 aa12.79□□□□□ -0.36
NECAP1-212ENST00000638787 FBXO41Q8TF61 875 aa12.79□□□□□ -0.36
NECAP1-212ENST00000638787 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
NECAP1-212ENST00000638787 NCOA3Q9Y6Q9 1424 aa12.78□□□□□ -0.36
NECAP1-212ENST00000638787 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
NECAP1-212ENST00000638787 TONSLQ96HA7 1378 aa12.78□□□□□ -0.36
NECAP1-212ENST00000638787 YTHDC2Q9H6S0 1430 aaKnown RBP12.78□□□□□ -0.36
NECAP1-212ENST00000638787 KNDC1Q76NI1 1749 aa12.78□□□□□ -0.36
NECAP1-212ENST00000638787 UBAP1LF5GYI3 381 aa12.77□□□□□ -0.36
NECAP1-212ENST00000638787 ADGRB1O14514 1584 aa12.77□□□□□ -0.36
NECAP1-212ENST00000638787 TECPR2O15040 1411 aa12.77□□□□□ -0.36
NECAP1-212ENST00000638787 KIAA1210Q9ULL0 1709 aa12.77□□□□□ -0.36
NECAP1-212ENST00000638787 ROBO2Q9HCK4 1378 aa12.77□□□□□ -0.37
NECAP1-212ENST00000638787 STK26Q9P289 416 aa12.77□□□□□ -0.37
NECAP1-212ENST00000638787 ABCC11Q96J66 1382 aa12.76□□□□□ -0.37
NECAP1-212ENST00000638787 CCER1Q8TC90 406 aaPredicted RBP12.76□□□□□ -0.37
NECAP1-212ENST00000638787 MSH6P52701 1360 aa12.76□□□□□ -0.37
NECAP1-212ENST00000638787 C14orf37Q86TY3 774 aa12.76□□□□□ -0.37
NECAP1-212ENST00000638787 TOM1O60784 492 aa12.75□□□□□ -0.37
NECAP1-212ENST00000638787 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.74□□□□□ -0.37
NECAP1-212ENST00000638787 NALCNQ8IZF0 1738 aa12.73□□□□□ -0.37
NECAP1-212ENST00000638787 ADGRL3Q9HAR2 1447 aa12.73□□□□□ -0.37
NECAP1-212ENST00000638787 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
NECAP1-212ENST00000638787 C19orf44Q9H6X5 657 aa12.73□□□□□ -0.37
NECAP1-212ENST00000638787 DLC1Q96QB1 1528 aa12.73□□□□□ -0.37
NECAP1-212ENST00000638787 TRPM1Q7Z4N2 1603 aa12.72□□□□□ -0.37
NECAP1-212ENST00000638787 FAM135BQ49AJ0 1406 aa12.72□□□□□ -0.37
NECAP1-212ENST00000638787 NBPF1Q3BBV0 1214 aa12.72□□□□□ -0.37
NECAP1-212ENST00000638787 PIP4K2BP78356 416 aa12.71□□□□□ -0.37
NECAP1-212ENST00000638787 WAPLQ7Z5K2 1190 aa12.71□□□□□ -0.37
NECAP1-212ENST00000638787 PLEKHH1Q9ULM0 1364 aa12.71□□□□□ -0.37
NECAP1-212ENST00000638787 DCCP43146 1447 aa12.71□□□□□ -0.37
NECAP1-212ENST00000638787 SIRT1Q96EB6 747 aa12.71□□□□□ -0.38
NECAP1-212ENST00000638787 TRAK1Q9UPV9 953 aa12.71□□□□□ -0.38
NECAP1-212ENST00000638787 SCAF1Q9H7N4 1312 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms