RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 CAMSAP1Q5T5Y3 1602 aa13.87□□□□□ -0.19
ATM-226ENST00000638443 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
ATM-226ENST00000638443 MROH2AA6NES4 1674 aa13.87□□□□□ -0.19
ATM-226ENST00000638443 CFAP65Q6ZU64 1925 aaKnown RBP13.86□□□□□ -0.19
ATM-226ENST00000638443 CCDC7Q96M83 1385 aa13.85□□□□□ -0.19
ATM-226ENST00000638443 KIF7Q2M1P5 1343 aa13.84□□□□□ -0.19
ATM-226ENST00000638443 MADDQ8WXG6 1647 aa13.84□□□□□ -0.19
ATM-226ENST00000638443 ST20-MTHFSA0A0A6YYL1 179 aa13.81□□□□□ -0.2
ATM-226ENST00000638443 SYNMO15061 1565 aa13.81□□□□□ -0.2
ATM-226ENST00000638443 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
ATM-226ENST00000638443 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
ATM-226ENST00000638443 ARHGEF40Q8TER5 1519 aa13.81□□□□□ -0.2
ATM-226ENST00000638443 ADGRB3O60242 1522 aa13.8□□□□□ -0.2
ATM-226ENST00000638443 CHGAP10645 457 aaKnown RBP13.79□□□□□ -0.2
ATM-226ENST00000638443 ZC3H13Q5T200 1668 aaKnown RBP13.79□□□□□ -0.2
ATM-226ENST00000638443 CNTLNQ9NXG0 1405 aa13.79□□□□□ -0.2
ATM-226ENST00000638443 KIF1BO60333 1816 aa13.79□□□□□ -0.2
ATM-226ENST00000638443 MLECQ14165 292 aa13.79□□□□□ -0.2
ATM-226ENST00000638443 GPRASP1Q5JY77 1395 aa13.79□□□□□ -0.2
ATM-226ENST00000638443 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
ATM-226ENST00000638443 NOS1P29475 1434 aa13.78□□□□□ -0.2
ATM-226ENST00000638443 REREQ9P2R6 1566 aa13.77□□□□□ -0.2
ATM-226ENST00000638443 ADGRF5Q8IZF2 1346 aa13.77□□□□□ -0.21
ATM-226ENST00000638443 IFT172Q9UG01 1749 aa13.77□□□□□ -0.21
ATM-226ENST00000638443 ANP32CO43423 234 aa13.76□□□□□ -0.21
ATM-226ENST00000638443 NEURL4Q96JN8 1562 aa13.76□□□□□ -0.21
ATM-226ENST00000638443 FBXO31Q5XUX0 539 aaPredicted RBP13.75□□□□□ -0.21
ATM-226ENST00000638443 PIK3C2BO00750 1634 aa13.75□□□□□ -0.21
ATM-226ENST00000638443 LAMC1P11047 1609 aa13.75□□□□□ -0.21
ATM-226ENST00000638443 AGLP35573 1532 aa13.75□□□□□ -0.21
ATM-226ENST00000638443 ARHGAP31Q2M1Z3 1444 aa13.74□□□□□ -0.21
ATM-226ENST00000638443 CLTCQ00610 1675 aaKnown RBP13.74□□□□□ -0.21
ATM-226ENST00000638443 PREX1Q8TCU6 1659 aa13.74□□□□□ -0.21
ATM-226ENST00000638443 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
ATM-226ENST00000638443 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
ATM-226ENST00000638443 MYOM2P54296 1465 aa13.73□□□□□ -0.21
ATM-226ENST00000638443 CFAP70Q5T0N1 1121 aa13.72□□□□□ -0.21
ATM-226ENST00000638443 CNGB1Q14028 1251 aaPredicted RBP13.72□□□□□ -0.21
ATM-226ENST00000638443 IQGAP1P46940 1657 aa13.72□□□□□ -0.21
ATM-226ENST00000638443 DISP3Q9P2K9 1392 aa13.71□□□□□ -0.21
ATM-226ENST00000638443 IDI1Q13907 227 aa13.71□□□□□ -0.21
ATM-226ENST00000638443 PPLO60437 1756 aa13.71□□□□□ -0.21
ATM-226ENST00000638443 TESK2Q96S53 571 aa13.7□□□□□ -0.22
ATM-226ENST00000638443 ERVK-7P63135 1459 aa13.7□□□□□ -0.22
ATM-226ENST00000638443 NRXN1Q9ULB1 1477 aa13.7□□□□□ -0.22
ATM-226ENST00000638443 MYO5BQ9ULV0 1848 aa13.69□□□□□ -0.22
ATM-226ENST00000638443 CENPBP07199 599 aaPredicted RBP13.69□□□□□ -0.22
ATM-226ENST00000638443 NEXMIFQ5QGS0 1516 aa13.68□□□□□ -0.22
ATM-226ENST00000638443 PIK3C2GO75747 1445 aa13.67□□□□□ -0.22
ATM-226ENST00000638443 ARID4BQ4LE39 1312 aaPredicted RBP13.67□□□□□ -0.22
ATM-226ENST00000638443 CCDC184Q52MB2 194 aa13.67□□□□□ -0.22
ATM-226ENST00000638443 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
ATM-226ENST00000638443 KIAA1210Q9ULL0 1709 aa13.66□□□□□ -0.22
ATM-226ENST00000638443 TMEM131LA2VDJ0 1609 aa13.66□□□□□ -0.22
ATM-226ENST00000638443 CCER2I3L3R5 266 aa13.65□□□□□ -0.22
ATM-226ENST00000638443 PRKRIP1Q9H875 184 aaPredicted RBP13.65□□□□□ -0.22
ATM-226ENST00000638443 TMEM132EQ6IEE7 984 aa13.64□□□□□ -0.23
ATM-226ENST00000638443 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
ATM-226ENST00000638443 SPATA31D1Q6ZQQ2 1576 aa13.63□□□□□ -0.23
ATM-226ENST00000638443 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
ATM-226ENST00000638443 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
ATM-226ENST00000638443 ADGRB1O14514 1584 aa13.62□□□□□ -0.23
ATM-226ENST00000638443 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
ATM-226ENST00000638443 ZMYM3Q14202 1370 aa13.61□□□□□ -0.23
ATM-226ENST00000638443 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
ATM-226ENST00000638443 RPGRIP1LQ68CZ1 1315 aa13.6□□□□□ -0.23
ATM-226ENST00000638443 TMF1P82094 1093 aa13.6□□□□□ -0.23
ATM-226ENST00000638443 C14orf93Q9H972 538 aaKnown RBP13.6□□□□□ -0.23
ATM-226ENST00000638443 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
ATM-226ENST00000638443 SETBP1Q9Y6X0 1596 aa13.59□□□□□ -0.23
ATM-226ENST00000638443 ESF1Q9H501 851 aaKnown RBP13.59□□□□□ -0.23
ATM-226ENST00000638443 TRAK1Q9UPV9 953 aa13.59□□□□□ -0.23
ATM-226ENST00000638443 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
ATM-226ENST00000638443 EIF3AQ14152 1382 aaKnown RBP13.58□□□□□ -0.24
ATM-226ENST00000638443 A2ML1A8K2U0 1454 aa13.58□□□□□ -0.24
ATM-226ENST00000638443 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
ATM-226ENST00000638443 VGFO15240 615 aaPredicted RBP13.57□□□□□ -0.24
ATM-226ENST00000638443 CEBPAP49715 358 aaPredicted RBP13.57□□□□□ -0.24
ATM-226ENST00000638443 MYO3AQ8NEV4 1616 aa13.56□□□□□ -0.24
ATM-226ENST00000638443 MYOM1P52179 1685 aa13.56□□□□□ -0.24
ATM-226ENST00000638443 MRS2Q9HD23 443 aa13.55□□□□□ -0.24
ATM-226ENST00000638443 PANK3Q9H999 370 aa13.54□□□□□ -0.24
ATM-226ENST00000638443 QRICH2Q9H0J4 1663 aa13.54□□□□□ -0.24
ATM-226ENST00000638443 ARHGEF28Q8N1W1 1705 aaKnown RBP13.54□□□□□ -0.24
ATM-226ENST00000638443 ZFYVE9O95405 1425 aa13.53□□□□□ -0.24
ATM-226ENST00000638443 PER1O15534 1290 aaPredicted RBP13.53□□□□□ -0.24
ATM-226ENST00000638443 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
ATM-226ENST00000638443 CENPJQ9HC77 1338 aaPredicted RBP13.53□□□□□ -0.24
ATM-226ENST00000638443 TNRQ92752 1358 aa13.53□□□□□ -0.24
ATM-226ENST00000638443 STK26Q9P289 416 aa13.52□□□□□ -0.24
ATM-226ENST00000638443 RIMS2Q9UQ26 1411 aa13.52□□□□□ -0.24
ATM-226ENST00000638443 KDM5AP29375 1690 aaKnown RBP13.52□□□□□ -0.25
ATM-226ENST00000638443 SAFB2Q14151 953 aaKnown RBP eCLIP13.52□□□□□ -0.25
ATM-226ENST00000638443 FAM9BQ8IZU0 186 aa13.52□□□□□ -0.25
ATM-226ENST00000638443 CC2D1BQ5T0F9 858 aaKnown RBP13.51□□□□□ -0.25
ATM-226ENST00000638443 FER1L4A9Z1Z3 1794 aa13.51□□□□□ -0.25
ATM-226ENST00000638443 ALKQ9UM73 1620 aa13.51□□□□□ -0.25
ATM-226ENST00000638443 PTPRMP28827 1452 aa13.51□□□□□ -0.25
ATM-226ENST00000638443 C3P01024 1663 aa13.51□□□□□ -0.25
ATM-226ENST00000638443 NRXN3Q9Y4C0 1643 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms