RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 THEMISQ8N1K5 641 aaPredicted RBP7.26□□□□□ -1.25
CHD2-227ENST00000637572 SHANK2Q9UPX8 1470 aa7.26□□□□□ -1.25
CHD2-227ENST00000637572 WDR70Q9NW82 654 aa7.26□□□□□ -1.25
CHD2-227ENST00000637572 STK24Q9Y6E0 443 aa7.26□□□□□ -1.25
CHD2-227ENST00000637572 RTEL1-TNFRSF6BF6WH68 1400 aa7.26□□□□□ -1.25
CHD2-227ENST00000637572 ERBINQ96RT1 1412 aa7.25□□□□□ -1.25
CHD2-227ENST00000637572 ILDR2Q71H61 639 aa7.25□□□□□ -1.25
CHD2-227ENST00000637572 ABCC10Q5T3U5 1492 aa7.25□□□□□ -1.25
CHD2-227ENST00000637572 PROM2Q8N271 834 aa7.25□□□□□ -1.25
CHD2-227ENST00000637572 ST20-MTHFSA0A0A6YYL1 179 aa7.25□□□□□ -1.25
CHD2-227ENST00000637572 CEBPAP49715 358 aaPredicted RBP7.24□□□□□ -1.25
CHD2-227ENST00000637572 DUOX2Q9NRD8 1548 aa7.24□□□□□ -1.25
CHD2-227ENST00000637572 SAFB2Q14151 953 aaKnown RBP eCLIP7.24□□□□□ -1.25
CHD2-227ENST00000637572 TRAK1Q9UPV9 953 aa7.24□□□□□ -1.25
CHD2-227ENST00000637572 NUTM2BA6NNL0 878 aaPredicted RBP7.24□□□□□ -1.25
CHD2-227ENST00000637572 NUTM2EB1AL46 878 aaPredicted RBP7.24□□□□□ -1.25
CHD2-227ENST00000637572 CC2D1BQ5T0F9 858 aaKnown RBP7.24□□□□□ -1.25
CHD2-227ENST00000637572 NUTM2DQ5VT03 806 aaPredicted RBP7.24□□□□□ -1.25
CHD2-227ENST00000637572 NUTM2AQ8IVF1 878 aaPredicted RBP7.24□□□□□ -1.25
CHD2-227ENST00000637572 CENPJQ9HC77 1338 aaPredicted RBP7.24□□□□□ -1.25
CHD2-227ENST00000637572 PPM1GO15355 546 aaPredicted RBP7.23□□□□□ -1.25
CHD2-227ENST00000637572 NPM2Q86SE8 214 aaKnown RBP7.23□□□□□ -1.25
CHD2-227ENST00000637572 CHMP4AQ9BY43 222 aa7.23□□□□□ -1.25
CHD2-227ENST00000637572 LMOD2Q6P5Q4 547 aa7.23□□□□□ -1.25
CHD2-227ENST00000637572 NLRP13Q86W25 1043 aa7.23□□□□□ -1.25
CHD2-227ENST00000637572 CALD1Q05682 793 aaKnown RBP7.22□□□□□ -1.25
CHD2-227ENST00000637572 CHMP4BQ9H444 224 aaKnown RBP7.22□□□□□ -1.25
CHD2-227ENST00000637572 MS4A1P11836 297 aa7.22□□□□□ -1.25
CHD2-227ENST00000637572 NGDNQ8NEJ9 315 aaKnown RBP7.21□□□□□ -1.25
CHD2-227ENST00000637572 ZBTB7CA1YPR0 619 aa7.21□□□□□ -1.26
CHD2-227ENST00000637572 CCDC9Q9Y3X0 531 aaKnown RBP7.21□□□□□ -1.26
CHD2-227ENST00000637572 NEO1Q92859 1461 aa7.21□□□□□ -1.26
CHD2-227ENST00000637572 CGNL1Q0VF96 1302 aa7.21□□□□□ -1.26
CHD2-227ENST00000637572 ABCA8O94911 1581 aa7.21□□□□□ -1.26
CHD2-227ENST00000637572 KDM5BQ9UGL1 1544 aa7.21□□□□□ -1.26
CHD2-227ENST00000637572 SF3B2Q13435 895 aaKnown RBP7.21□□□□□ -1.26
CHD2-227ENST00000637572 SALL2Q9Y467 1007 aaPredicted RBP7.21□□□□□ -1.26
CHD2-227ENST00000637572 A2MP01023 1474 aa7.2□□□□□ -1.26
CHD2-227ENST00000637572 RNF25Q96BH1 459 aaPredicted RBP7.2□□□□□ -1.26
CHD2-227ENST00000637572 U2SURPO15042 1029 aaKnown RBP7.2□□□□□ -1.26
CHD2-227ENST00000637572 TXNDC2Q86VQ3 553 aa7.2□□□□□ -1.26
CHD2-227ENST00000637572 NGEFQ8N5V2 710 aa7.2□□□□□ -1.26
CHD2-227ENST00000637572 BCL11BQ9C0K0 894 aaPredicted RBP7.2□□□□□ -1.26
CHD2-227ENST00000637572 WASHC2AQ641Q2 1341 aa7.2□□□□□ -1.26
CHD2-227ENST00000637572 SYCP2Q9BX26 1530 aa7.19□□□□□ -1.26
CHD2-227ENST00000637572 NKX1-1Q15270 411 aaPredicted RBP7.19□□□□□ -1.26
CHD2-227ENST00000637572 ANKLE2Q86XL3 938 aa7.19□□□□□ -1.26
CHD2-227ENST00000637572 MYBBP1AQ9BQG0 1328 aaKnown RBP7.18□□□□□ -1.26
CHD2-227ENST00000637572 MYH16Q9H6N6 1097 aa7.18□□□□□ -1.26
CHD2-227ENST00000637572 CFAP74Q9C0B2 1584 aa7.18□□□□□ -1.26
CHD2-227ENST00000637572 ADGRL2O95490 1459 aa7.18□□□□□ -1.26
CHD2-227ENST00000637572 TNNT2P45379 298 aaPredicted RBP7.18□□□□□ -1.26
CHD2-227ENST00000637572 HS6ST3Q8IZP7 471 aa7.18□□□□□ -1.26
CHD2-227ENST00000637572 CHD1O14646 1710 aa7.17□□□□□ -1.26
CHD2-227ENST00000637572 PAK3O75914 559 aaPredicted RBP7.17□□□□□ -1.26
CHD2-227ENST00000637572 PANK3Q9H999 370 aa7.17□□□□□ -1.26
CHD2-227ENST00000637572 CCDC7Q96M83 1385 aa7.17□□□□□ -1.26
CHD2-227ENST00000637572 LMOD3Q0VAK6 560 aa7.17□□□□□ -1.26
CHD2-227ENST00000637572 COG3Q96JB2 828 aa7.17□□□□□ -1.26
CHD2-227ENST00000637572 MAPKBP1O60336 1514 aa7.17□□□□□ -1.26
CHD2-227ENST00000637572 RPRD2Q5VT52 1461 aaKnown RBP7.16□□□□□ -1.26
CHD2-227ENST00000637572 TRAPPC8Q9Y2L5 1435 aa7.16□□□□□ -1.26
CHD2-227ENST00000637572 PDE3BQ13370 1112 aa7.16□□□□□ -1.26
CHD2-227ENST00000637572 DNMT1P26358 1616 aaKnown RBP7.16□□□□□ -1.26
CHD2-227ENST00000637572 EIF5BO60841 1220 aaKnown RBP7.16□□□□□ -1.26
CHD2-227ENST00000637572 RTF1Q92541 710 aaKnown RBP7.16□□□□□ -1.26
CHD2-227ENST00000637572 CCDC136Q96JN2 1154 aa7.16□□□□□ -1.26
CHD2-227ENST00000637572 MINK1Q8N4C8 1332 aaPredicted RBP7.16□□□□□ -1.26
CHD2-227ENST00000637572 CNTLNQ9NXG0 1405 aa7.16□□□□□ -1.26
CHD2-227ENST00000637572 CFAP70Q5T0N1 1121 aa7.16□□□□□ -1.26
CHD2-227ENST00000637572 CLEC11AQ9Y240 323 aa7.15□□□□□ -1.26
CHD2-227ENST00000637572 FAM135AQ9P2D6 1515 aa7.15□□□□□ -1.27
CHD2-227ENST00000637572 U2AF1L5P0DN76 240 aaPredicted RBP7.15□□□□□ -1.27
CHD2-227ENST00000637572 U2AF1Q01081 240 aaKnown RBP eCLIP7.15□□□□□ -1.272e-7■□□□□ 10.6
CHD2-227ENST00000637572 ARHGEF5Q12774 1597 aa7.15□□□□□ -1.27
CHD2-227ENST00000637572 ATF3P18847 181 aa7.15□□□□□ -1.27
CHD2-227ENST00000637572 PRKRIP1Q9H875 184 aaPredicted RBP7.14□□□□□ -1.27
CHD2-227ENST00000637572 ZBTB12Q9Y330 459 aaPredicted RBP7.14□□□□□ -1.27
CHD2-227ENST00000637572 ATAD2Q6PL18 1390 aa7.14□□□□□ -1.27
CHD2-227ENST00000637572 PTPRKQ15262 1439 aa7.14□□□□□ -1.27
CHD2-227ENST00000637572 KDM6BO15054 1643 aa7.14□□□□□ -1.27
CHD2-227ENST00000637572 KIF7Q2M1P5 1343 aa7.14□□□□□ -1.27
CHD2-227ENST00000637572 UPF2Q9HAU5 1272 aaKnown RBP7.14□□□□□ -1.27
CHD2-227ENST00000637572 AMPHP49418 695 aa7.13□□□□□ -1.27
CHD2-227ENST00000637572 ATP10AO60312 1499 aa7.13□□□□□ -1.27
CHD2-227ENST00000637572 GTPBP6O43824 516 aaPredicted RBP7.13□□□□□ -1.27
CHD2-227ENST00000637572 ARAP3Q8WWN8 1544 aa7.13□□□□□ -1.27
CHD2-227ENST00000637572 ERICH6BQ5W0A0 696 aa7.13□□□□□ -1.27
CHD2-227ENST00000637572 MAGI2Q86UL8 1455 aa7.13□□□□□ -1.27
CHD2-227ENST00000637572 FTSJ3Q8IY81 847 aaKnown RBP7.13□□□□□ -1.27
CHD2-227ENST00000637572 SLC24A3Q9HC58 644 aa7.13□□□□□ -1.27
CHD2-227ENST00000637572 TNRQ92752 1358 aa7.13□□□□□ -1.27
CHD2-227ENST00000637572 ATP7AQ04656 1500 aa7.12□□□□□ -1.27
CHD2-227ENST00000637572 PYGBP11216 843 aa7.12□□□□□ -1.27
CHD2-227ENST00000637572 RIOK3O14730 519 aaKnown RBP7.12□□□□□ -1.27
CHD2-227ENST00000637572 CSB-PGBD3P0DP91 1061 aa7.12□□□□□ -1.27
CHD2-227ENST00000637572 BRPF1P55201 1214 aaPredicted RBP7.12□□□□□ -1.27
CHD2-227ENST00000637572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.12□□□□□ -1.27
CHD2-227ENST00000637572 IDI1Q13907 227 aa7.12□□□□□ -1.27
CHD2-227ENST00000637572 KCNV2Q8TDN2 545 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms