RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 XIRP1Q702N8 1843 aaKnown RBP34.74■■■■□ 3.15
CHRNA7-229ENST00000637552 ZFYVE9O95405 1425 aa34.72■■■■□ 3.15
CHRNA7-229ENST00000637552 PPP1R15AO75807 674 aaPredicted RBP34.72■■■■□ 3.15
CHRNA7-229ENST00000637552 CHGAP10645 457 aaKnown RBP34.72■■■■□ 3.15
CHRNA7-229ENST00000637552 KCNA6P17658 529 aa34.72■■■■□ 3.15
CHRNA7-229ENST00000637552 RIMS2Q9UQ26 1411 aa34.72■■■■□ 3.15
CHRNA7-229ENST00000637552 HDGFP51858 240 aaKnown RBP34.71■■■■□ 3.15
CHRNA7-229ENST00000637552 RRBP1Q9P2E9 1410 aaKnown RBP34.68■■■■□ 3.14
CHRNA7-229ENST00000637552 PLEKHG1Q9ULL1 1385 aa34.68■■■■□ 3.14
CHRNA7-229ENST00000637552 TMEM94Q12767 1356 aa34.67■■■■□ 3.14
CHRNA7-229ENST00000637552 SENP3Q9H4L4 574 aaPredicted RBP34.67■■■■□ 3.14
CHRNA7-229ENST00000637552 NWD1Q149M9 1564 aa34.65■■■■□ 3.14
CHRNA7-229ENST00000637552 NKTRP30414 1462 aaKnown RBP34.65■■■■□ 3.14
CHRNA7-229ENST00000637552 MED1Q15648 1581 aaPredicted RBP34.63■■■■□ 3.13
CHRNA7-229ENST00000637552 PROSER2Q86WR7 435 aaPredicted RBP34.63■■■■□ 3.13
CHRNA7-229ENST00000637552 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.63■■■■□ 3.13
CHRNA7-229ENST00000637552 SOCS7O14512 581 aa34.57■■■■□ 3.12
CHRNA7-229ENST00000637552 SPHKAPQ2M3C7 1700 aa34.57■■■■□ 3.12
CHRNA7-229ENST00000637552 NUTM2DQ5VT03 806 aaPredicted RBP34.55■■■■□ 3.12
CHRNA7-229ENST00000637552 RBM33Q96EV2 1170 aaKnown RBP34.55■■■■□ 3.12
CHRNA7-229ENST00000637552 CHD2O14647 1828 aaKnown RBP34.55■■■■□ 3.12
CHRNA7-229ENST00000637552 TBX22Q9Y458 520 aa34.52■■■■□ 3.12
CHRNA7-229ENST00000637552 NAIPQ13075 1403 aa34.52■■■■□ 3.12
CHRNA7-229ENST00000637552 DIP2AQ14689 1571 aa34.5■■■■□ 3.11
CHRNA7-229ENST00000637552 MSH6P52701 1360 aa34.49■■■■□ 3.11
CHRNA7-229ENST00000637552 FAM135BQ49AJ0 1406 aa34.49■■■■□ 3.11
CHRNA7-229ENST00000637552 ADAMTS13Q76LX8 1427 aa34.47■■■■□ 3.11
CHRNA7-229ENST00000637552 PHF23Q9BUL5 403 aaPredicted RBP34.44■■■■□ 3.1
CHRNA7-229ENST00000637552 ROBO1Q9Y6N7 1651 aa34.44■■■■□ 3.1
CHRNA7-229ENST00000637552 HFM1A2PYH4 1435 aa34.41■■■■□ 3.1
CHRNA7-229ENST00000637552 PIK3R4Q99570 1358 aa34.41■■■■□ 3.1
CHRNA7-229ENST00000637552 ZNF326Q5BKZ1 582 aaKnown RBP34.41■■■■□ 3.1
CHRNA7-229ENST00000637552 TRPM2O94759 1503 aa34.4■■■■□ 3.1
CHRNA7-229ENST00000637552 CLTCL1P53675 1640 aa34.38■■■■□ 3.09
CHRNA7-229ENST00000637552 C14orf37Q86TY3 774 aa34.37■■■■□ 3.09
CHRNA7-229ENST00000637552 TRIM52Q96A61 297 aa34.37■■■■□ 3.09
CHRNA7-229ENST00000637552 NCOA3Q9Y6Q9 1424 aa34.36■■■■□ 3.09
CHRNA7-229ENST00000637552 SLAIN2Q9P270 581 aa34.34■■■■□ 3.09
CHRNA7-229ENST00000637552 SETBP1Q9Y6X0 1596 aa34.32■■■■□ 3.09
CHRNA7-229ENST00000637552 KIF1BO60333 1816 aa34.32■■■■□ 3.08
CHRNA7-229ENST00000637552 NRXN3Q9Y4C0 1643 aa34.31■■■■□ 3.08
CHRNA7-229ENST00000637552 AMOTL2Q9Y2J4 779 aa34.3■■■■□ 3.08
CHRNA7-229ENST00000637552 NEXMIFQ5QGS0 1516 aa34.27■■■■□ 3.08
CHRNA7-229ENST00000637552 PTPRUQ92729 1446 aa34.27■■■■□ 3.08
CHRNA7-229ENST00000637552 SLC4A1APQ9BWU0 796 aaKnown RBP34.26■■■■□ 3.08
CHRNA7-229ENST00000637552 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.24■■■■□ 3.07
CHRNA7-229ENST00000637552 C19orf44Q9H6X5 657 aa34.24■■■■□ 3.07
CHRNA7-229ENST00000637552 PHLPP1O60346 1717 aa34.24■■■■□ 3.07
CHRNA7-229ENST00000637552 CADPS2Q86UW7 1296 aa34.23■■■■□ 3.07
CHRNA7-229ENST00000637552 XRN1Q8IZH2 1706 aaKnown RBP34.23■■■■□ 3.07
CHRNA7-229ENST00000637552 ATF3P18847 181 aa34.22■■■■□ 3.07
CHRNA7-229ENST00000637552 METP08581 1390 aa34.18■■■■□ 3.06
CHRNA7-229ENST00000637552 DCCP43146 1447 aa34.13■■■■□ 3.05
CHRNA7-229ENST00000637552 JCADQ9P266 1359 aa34.12■■■■□ 3.05
CHRNA7-229ENST00000637552 VGFO15240 615 aaPredicted RBP34.11■■■■□ 3.05
CHRNA7-229ENST00000637552 COL16A1Q07092 1604 aaPredicted RBP34.11■■■■□ 3.05
CHRNA7-229ENST00000637552 RPGRIP1LQ68CZ1 1315 aa34.08■■■■□ 3.05
CHRNA7-229ENST00000637552 FOXD1Q16676 465 aa34.07■■■■□ 3.04
CHRNA7-229ENST00000637552 RGS17Q9UGC6 210 aaPredicted RBP34.07■■■■□ 3.04
CHRNA7-229ENST00000637552 AHDC1Q5TGY3 1603 aaPredicted RBP34.07■■■■□ 3.04
CHRNA7-229ENST00000637552 PPLO60437 1756 aa34.05■■■■□ 3.04
CHRNA7-229ENST00000637552 CCDC144AA2RUR9 1427 aa34.03■■■■□ 3.04
CHRNA7-229ENST00000637552 ADGRL3Q9HAR2 1447 aa34.03■■■■□ 3.04
CHRNA7-229ENST00000637552 BRINP3Q76B58 766 aa34.02■■■■□ 3.04
CHRNA7-229ENST00000637552 SETD1AO15047 1707 aaKnown RBP34.01■■■■□ 3.04
CHRNA7-229ENST00000637552 NALCNQ8IZF0 1738 aa33.99■■■■□ 3.03
CHRNA7-229ENST00000637552 MST1RQ04912 1400 aa33.99■■■■□ 3.03
CHRNA7-229ENST00000637552 MPHOSPH9Q99550 1183 aa33.98■■■■□ 3.03
CHRNA7-229ENST00000637552 ASXL1Q8IXJ9 1541 aa33.98■■■■□ 3.03
CHRNA7-229ENST00000637552 PTCH1Q13635 1447 aa33.97■■■■□ 3.03
CHRNA7-229ENST00000637552 SPATA31A6Q5VVP1 1343 aa33.95■■■■□ 3.03
CHRNA7-229ENST00000637552 SHPRHQ149N8 1683 aa33.94■■■■□ 3.02
CHRNA7-229ENST00000637552 ACIN1Q9UKV3 1341 aaKnown RBP33.92■■■■□ 3.02
CHRNA7-229ENST00000637552 ROBO2Q9HCK4 1378 aa33.91■■■■□ 3.02
CHRNA7-229ENST00000637552 POTEAQ6S8J7 498 aa33.91■■■■□ 3.02
CHRNA7-229ENST00000637552 RGL3Q3MIN7 710 aa33.9■■■■□ 3.02
CHRNA7-229ENST00000637552 NHSL1Q5SYE7 1610 aa33.9■■■■□ 3.02
CHRNA7-229ENST00000637552 SETD5Q9C0A6 1442 aa33.89■■■■□ 3.02
CHRNA7-229ENST00000637552 SPATA31E1Q6ZUB1 1445 aa33.88■■■■□ 3.01
CHRNA7-229ENST00000637552 PRAG1Q86YV5 1406 aa33.88■■■■□ 3.01
CHRNA7-229ENST00000637552 MEX3CQ5U5Q3 659 aaKnown RBP33.88■■■■□ 3.01
CHRNA7-229ENST00000637552 LRP6O75581 1613 aa33.88■■■■□ 3.01
CHRNA7-229ENST00000637552 ANKRD30BQ9BXX2 1392 aa33.85■■■■□ 3.01
CHRNA7-229ENST00000637552 IFT172Q9UG01 1749 aa33.84■■■■□ 3.01
CHRNA7-229ENST00000637552 ADGRF5Q8IZF2 1346 aa33.84■■■■□ 3.01
CHRNA7-229ENST00000637552 C1orf167Q5SNV9 1468 aa33.82■■■■□ 3
CHRNA7-229ENST00000637552 LRRC59Q96AG4 307 aaKnown RBP33.78■■■■□ 3
CHRNA7-229ENST00000637552 NUTM2BA6NNL0 878 aaPredicted RBP33.77■■■■□ 3
CHRNA7-229ENST00000637552 NUTM2EB1AL46 878 aaPredicted RBP33.77■■■■□ 3
CHRNA7-229ENST00000637552 NUTM2AQ8IVF1 878 aaPredicted RBP33.77■■■■□ 3
CHRNA7-229ENST00000637552 DDX17Q92841 729 aaKnown RBP33.77■■■■□ 3
CHRNA7-229ENST00000637552 RAB3GAP2Q9H2M9 1393 aa33.76■■■■□ 3
CHRNA7-229ENST00000637552 PIK3C2GO75747 1445 aa33.73■■■□□ 2.99
CHRNA7-229ENST00000637552 ZNF772Q68DY9 489 aaPredicted RBP33.73■■■□□ 2.99
CHRNA7-229ENST00000637552 STK26Q9P289 416 aa33.72■■■□□ 2.99
CHRNA7-229ENST00000637552 CDC42BPGQ6DT37 1551 aa33.71■■■□□ 2.99
CHRNA7-229ENST00000637552 LRPPRCP42704 1394 aaKnown RBP33.71■■■□□ 2.99
CHRNA7-229ENST00000637552 ORAI2Q96SN7 254 aa33.7■■■□□ 2.99
CHRNA7-229ENST00000637552 TECPR2O15040 1411 aa33.7■■■□□ 2.98
CHRNA7-229ENST00000637552 LAMC1P11047 1609 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms