RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 FOXD4L6Q3SYB3 417 aaPredicted RBP19.68■□□□□ 0.74
CLN5-218ENST00000637397 FOXD4L3Q6VB84 417 aaPredicted RBP19.68■□□□□ 0.74
CLN5-218ENST00000637397 SKAP1Q86WV1 359 aa19.68■□□□□ 0.74
CLN5-218ENST00000637397 TCP11L2Q8N4U5 519 aa19.67■□□□□ 0.74
CLN5-218ENST00000637397 VSIG10Q8N0Z9 540 aa19.66■□□□□ 0.74
CLN5-218ENST00000637397 MINK1Q8N4C8 1332 aaPredicted RBP19.65■□□□□ 0.74
CLN5-218ENST00000637397 VGFO15240 615 aaPredicted RBP19.64■□□□□ 0.73
CLN5-218ENST00000637397 DIAPH1O60610 1272 aaKnown RBP19.64■□□□□ 0.73
CLN5-218ENST00000637397 MTHFSP49914 203 aa19.63■□□□□ 0.73
CLN5-218ENST00000637397 PDZRN3Q9UPQ7 1066 aa19.63■□□□□ 0.73
CLN5-218ENST00000637397 NUTM2FA1L443 756 aa19.63■□□□□ 0.73
CLN5-218ENST00000637397 PCF11O94913 1555 aaKnown RBP19.63■□□□□ 0.73
CLN5-218ENST00000637397 RILPL2Q969X0 211 aa19.63■□□□□ 0.73
CLN5-218ENST00000637397 DAPK1P53355 1430 aa19.62■□□□□ 0.73
CLN5-218ENST00000637397 AAMPQ13685 434 aa19.62■□□□□ 0.73
CLN5-218ENST00000637397 PDE3AQ14432 1141 aa19.62■□□□□ 0.73
CLN5-218ENST00000637397 CFAP70Q5T0N1 1121 aa19.62■□□□□ 0.73
CLN5-218ENST00000637397 STAC3Q96MF2 364 aa19.61■□□□□ 0.73
CLN5-218ENST00000637397 ANKRD30BQ9BXX2 1392 aa19.61■□□□□ 0.73
CLN5-218ENST00000637397 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
CLN5-218ENST00000637397 PRG4Q92954 1404 aaPredicted RBP19.6■□□□□ 0.73
CLN5-218ENST00000637397 TRAK2O60296 914 aa19.6■□□□□ 0.73
CLN5-218ENST00000637397 KIF16BQ96L93 1317 aa19.59■□□□□ 0.73
CLN5-218ENST00000637397 GGNBP2Q9H3C7 697 aa19.59■□□□□ 0.73
CLN5-218ENST00000637397 MAPKBP1O60336 1514 aa19.59■□□□□ 0.73
CLN5-218ENST00000637397 PHF14O94880 888 aa19.59■□□□□ 0.73
CLN5-218ENST00000637397 TMEM132EQ6IEE7 984 aa19.58■□□□□ 0.73
CLN5-218ENST00000637397 MAP3K1Q13233 1512 aa19.58■□□□□ 0.73
CLN5-218ENST00000637397 NCOA1Q15788 1441 aa19.58■□□□□ 0.73
CLN5-218ENST00000637397 MRE11P49959 708 aa19.58■□□□□ 0.73
CLN5-218ENST00000637397 C20orf194Q5TEA3 1177 aa19.58■□□□□ 0.72
CLN5-218ENST00000637397 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
CLN5-218ENST00000637397 NESP48681 1621 aa19.57■□□□□ 0.72
CLN5-218ENST00000637397 CDK11BP21127 795 aaKnown RBP19.57■□□□□ 0.72
CLN5-218ENST00000637397 FAM43AQ8N2R8 423 aa19.57■□□□□ 0.72
CLN5-218ENST00000637397 C9orf84Q5VXU9 1444 aa19.57■□□□□ 0.72
CLN5-218ENST00000637397 REC8O95072 547 aa19.56■□□□□ 0.72
CLN5-218ENST00000637397 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
CLN5-218ENST00000637397 API5Q9BZZ5 524 aaKnown RBP19.55■□□□□ 0.72
CLN5-218ENST00000637397 COG3Q96JB2 828 aa19.54■□□□□ 0.72
CLN5-218ENST00000637397 AMPHP49418 695 aa19.54■□□□□ 0.72
CLN5-218ENST00000637397 EXOSC9Q06265 439 aaKnown RBP19.54■□□□□ 0.72
CLN5-218ENST00000637397 MCTP1Q6DN14 999 aa19.54■□□□□ 0.72
CLN5-218ENST00000637397 HMOX1P09601 288 aa19.54■□□□□ 0.72
CLN5-218ENST00000637397 AFAP1Q8N556 730 aa19.53■□□□□ 0.72
CLN5-218ENST00000637397 CSPP1Q1MSJ5 1256 aa19.53■□□□□ 0.72
CLN5-218ENST00000637397 LTV1Q96GA3 475 aaPredicted RBP19.53■□□□□ 0.72
CLN5-218ENST00000637397 CABP2Q9NPB3 220 aa19.53■□□□□ 0.72
CLN5-218ENST00000637397 CDK13Q14004 1512 aaKnown RBP19.53■□□□□ 0.72
CLN5-218ENST00000637397 HTATSF1O43719 755 aaKnown RBP19.52■□□□□ 0.72
CLN5-218ENST00000637397 TROQ12816 1431 aaPredicted RBP19.52■□□□□ 0.72
CLN5-218ENST00000637397 TSR2Q969E8 191 aaKnown RBP19.52■□□□□ 0.72
CLN5-218ENST00000637397 SLC12A5Q9H2X9 1139 aa19.52■□□□□ 0.71
CLN5-218ENST00000637397 GPATCH3Q96I76 525 aa19.51■□□□□ 0.71
CLN5-218ENST00000637397 FAM13BQ9NYF5 915 aa19.51■□□□□ 0.71
CLN5-218ENST00000637397 ROCK1Q13464 1354 aa19.51■□□□□ 0.71
CLN5-218ENST00000637397 ERBINQ96RT1 1412 aa19.51■□□□□ 0.71
CLN5-218ENST00000637397 NUCB2P80303 420 aa19.51■□□□□ 0.71
CLN5-218ENST00000637397 NGDNQ8NEJ9 315 aaKnown RBP19.51■□□□□ 0.71
CLN5-218ENST00000637397 GRIN2BQ13224 1484 aa19.51■□□□□ 0.71
CLN5-218ENST00000637397 HMGXB3Q12766 1538 aa19.5■□□□□ 0.71
CLN5-218ENST00000637397 EPRSP07814 1512 aaKnown RBP19.5■□□□□ 0.71
CLN5-218ENST00000637397 SLFN5Q08AF3 891 aa19.5■□□□□ 0.71
CLN5-218ENST00000637397 INTS3Q68E01 1043 aaKnown RBP19.49■□□□□ 0.71
CLN5-218ENST00000637397 CHMP4AQ9BY43 222 aa19.49■□□□□ 0.71
CLN5-218ENST00000637397 ANO2Q9NQ90 1003 aa19.49■□□□□ 0.71
CLN5-218ENST00000637397 NASPP49321 788 aaPredicted RBP19.48■□□□□ 0.71
CLN5-218ENST00000637397 GNAI1P63096 354 aa19.48■□□□□ 0.71
CLN5-218ENST00000637397 GNL2Q13823 731 aaKnown RBP19.48■□□□□ 0.71
CLN5-218ENST00000637397 AMER1Q5JTC6 1135 aaPredicted RBP19.48■□□□□ 0.71
CLN5-218ENST00000637397 HSP90B1P14625 803 aaKnown RBP19.48■□□□□ 0.71
CLN5-218ENST00000637397 HECW1Q76N89 1606 aa19.48■□□□□ 0.71
CLN5-218ENST00000637397 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
CLN5-218ENST00000637397 CDC45O75419 566 aa19.46■□□□□ 0.71
CLN5-218ENST00000637397 NECTIN2Q92692 538 aa19.46■□□□□ 0.71
CLN5-218ENST00000637397 ATP6V1DQ9Y5K8 247 aa19.46■□□□□ 0.71
CLN5-218ENST00000637397 C1orf115Q9H7X2 142 aa19.45■□□□□ 0.7
CLN5-218ENST00000637397 HDAC5Q9UQL6 1122 aa19.45■□□□□ 0.7
CLN5-218ENST00000637397 NOB1Q9ULX3 412 aaKnown RBP19.44■□□□□ 0.7
CLN5-218ENST00000637397 ABCC5O15440 1437 aa19.44■□□□□ 0.7
CLN5-218ENST00000637397 RPRD2Q5VT52 1461 aaKnown RBP19.44■□□□□ 0.7
CLN5-218ENST00000637397 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.44■□□□□ 0.7
CLN5-218ENST00000637397 ARHGAP5Q13017 1502 aa19.43■□□□□ 0.7
CLN5-218ENST00000637397 PTPRKQ15262 1439 aa19.43■□□□□ 0.7
CLN5-218ENST00000637397 WWC1Q8IX03 1113 aa19.43■□□□□ 0.7
CLN5-218ENST00000637397 MCM4P33991 863 aa19.42■□□□□ 0.7
CLN5-218ENST00000637397 MVPQ14764 893 aaKnown RBP19.42■□□□□ 0.7
CLN5-218ENST00000637397 CAVIN1Q6NZI2 390 aaKnown RBP19.42■□□□□ 0.7
CLN5-218ENST00000637397 CHMP3Q9Y3E7 222 aa19.42■□□□□ 0.7
CLN5-218ENST00000637397 RNF214Q8ND24 703 aa19.42■□□□□ 0.7
CLN5-218ENST00000637397 WDR63Q8IWG1 891 aa19.41■□□□□ 0.7
CLN5-218ENST00000637397 FKBP5Q13451 457 aaPredicted RBP19.41■□□□□ 0.7
CLN5-218ENST00000637397 DIAPH3Q9NSV4 1193 aa19.41■□□□□ 0.7
CLN5-218ENST00000637397 ABCA10Q8WWZ4 1543 aa19.4■□□□□ 0.7
CLN5-218ENST00000637397 PRKAR2BP31323 418 aa19.4■□□□□ 0.7
CLN5-218ENST00000637397 R3HCC1Q9Y3T6 440 aaKnown RBP19.4■□□□□ 0.7
CLN5-218ENST00000637397 ATF7IPQ6VMQ6 1270 aa19.4■□□□□ 0.7
CLN5-218ENST00000637397 ZNF330Q9Y3S2 320 aaPredicted RBP19.4■□□□□ 0.7
CLN5-218ENST00000637397 NINLQ9Y2I6 1382 aa19.39■□□□□ 0.69
CLN5-218ENST00000637397 EIF2S2P20042 333 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms