RNA–Protein interactions for RNA: ENST00000637078.1

CACNA1D-221, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 4

Gene CACNA1D, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-221ENST00000637078 FGD6Q6ZV73 1430 aa13.96□□□□□ -0.18
CACNA1D-221ENST00000637078 JCADQ9P266 1359 aa13.96□□□□□ -0.18
CACNA1D-221ENST00000637078 RPRD2Q5VT52 1461 aaKnown RBP13.95□□□□□ -0.18
CACNA1D-221ENST00000637078 COL16A1Q07092 1604 aaPredicted RBP13.95□□□□□ -0.18
CACNA1D-221ENST00000637078 RBM33Q96EV2 1170 aaKnown RBP13.95□□□□□ -0.18
CACNA1D-221ENST00000637078 BCANQ96GW7 911 aa13.94□□□□□ -0.18
CACNA1D-221ENST00000637078 SLC52A1Q9NWF4 448 aa13.94□□□□□ -0.18
CACNA1D-221ENST00000637078 APLP2Q06481 763 aa13.93□□□□□ -0.18
CACNA1D-221ENST00000637078 PLEKHG1Q9ULL1 1385 aa13.93□□□□□ -0.18
CACNA1D-221ENST00000637078 ADGRL2O95490 1459 aa13.93□□□□□ -0.18
CACNA1D-221ENST00000637078 ZFYVE9O95405 1425 aa13.92□□□□□ -0.18
CACNA1D-221ENST00000637078 CHIC2Q9UKJ5 165 aa13.92□□□□□ -0.18
CACNA1D-221ENST00000637078 TMEM131LA2VDJ0 1609 aa13.91□□□□□ -0.18
CACNA1D-221ENST00000637078 SLAIN2Q9P270 581 aa13.91□□□□□ -0.18
CACNA1D-221ENST00000637078 DIP2AQ14689 1571 aa13.91□□□□□ -0.18
CACNA1D-221ENST00000637078 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
CACNA1D-221ENST00000637078 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.18
CACNA1D-221ENST00000637078 NCOA3Q9Y6Q9 1424 aa13.9□□□□□ -0.18
CACNA1D-221ENST00000637078 PPP1R15AO75807 674 aaPredicted RBP13.9□□□□□ -0.18
CACNA1D-221ENST00000637078 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.9□□□□□ -0.18
CACNA1D-221ENST00000637078 AHDC1Q5TGY3 1603 aaPredicted RBP13.9□□□□□ -0.19
CACNA1D-221ENST00000637078 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
CACNA1D-221ENST00000637078 HDGFP51858 240 aaKnown RBP13.89□□□□□ -0.19
CACNA1D-221ENST00000637078 SPATA31A6Q5VVP1 1343 aa13.89□□□□□ -0.19
CACNA1D-221ENST00000637078 LRP6O75581 1613 aa13.88□□□□□ -0.19
CACNA1D-221ENST00000637078 ANKRD50Q9ULJ7 1429 aa13.88□□□□□ -0.19
CACNA1D-221ENST00000637078 UNC13BO14795 1591 aa13.87□□□□□ -0.19
CACNA1D-221ENST00000637078 MEX3CQ5U5Q3 659 aaKnown RBP13.86□□□□□ -0.19
CACNA1D-221ENST00000637078 C14orf37Q86TY3 774 aa13.86□□□□□ -0.19
CACNA1D-221ENST00000637078 E9PCH4 1651 aa13.85□□□□□ -0.19
CACNA1D-221ENST00000637078 ZNF772Q68DY9 489 aaPredicted RBP13.85□□□□□ -0.19
CACNA1D-221ENST00000637078 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.85□□□□□ -0.19
CACNA1D-221ENST00000637078 TBX22Q9Y458 520 aa13.85□□□□□ -0.19
CACNA1D-221ENST00000637078 TRPM2O94759 1503 aa13.85□□□□□ -0.19
CACNA1D-221ENST00000637078 PIK3R4Q99570 1358 aa13.84□□□□□ -0.19
CACNA1D-221ENST00000637078 CADPS2Q86UW7 1296 aa13.84□□□□□ -0.19
CACNA1D-221ENST00000637078 ADAMTS13Q76LX8 1427 aa13.83□□□□□ -0.2
CACNA1D-221ENST00000637078 CHGAP10645 457 aaKnown RBP13.82□□□□□ -0.2
CACNA1D-221ENST00000637078 ATF3P18847 181 aa13.82□□□□□ -0.2
CACNA1D-221ENST00000637078 IQGAP3Q86VI3 1631 aa13.82□□□□□ -0.2
CACNA1D-221ENST00000637078 C19orf44Q9H6X5 657 aa13.81□□□□□ -0.2
CACNA1D-221ENST00000637078 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
CACNA1D-221ENST00000637078 FAM50AQ14320 339 aaKnown RBP13.8□□□□□ -0.2
CACNA1D-221ENST00000637078 UPF1Q92900 1129 aaKnown RBP eCLIP13.8□□□□□ -0.2
CACNA1D-221ENST00000637078 TRIM52Q96A61 297 aa13.8□□□□□ -0.2
CACNA1D-221ENST00000637078 DCCP43146 1447 aa13.8□□□□□ -0.2
CACNA1D-221ENST00000637078 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
CACNA1D-221ENST00000637078 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
CACNA1D-221ENST00000637078 ASXL1Q8IXJ9 1541 aa13.78□□□□□ -0.2
CACNA1D-221ENST00000637078 RXRBP28702 533 aa13.77□□□□□ -0.21
CACNA1D-221ENST00000637078 NUTM2DQ5VT03 806 aaPredicted RBP13.77□□□□□ -0.21
CACNA1D-221ENST00000637078 NRXN3Q9Y4C0 1643 aa13.76□□□□□ -0.21
CACNA1D-221ENST00000637078 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
CACNA1D-221ENST00000637078 BRINP3Q76B58 766 aa13.76□□□□□ -0.21
CACNA1D-221ENST00000637078 SPHKAPQ2M3C7 1700 aa13.76□□□□□ -0.21
CACNA1D-221ENST00000637078 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
CACNA1D-221ENST00000637078 SETD5Q9C0A6 1442 aa13.75□□□□□ -0.21
CACNA1D-221ENST00000637078 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
CACNA1D-221ENST00000637078 NUTM2BA6NNL0 878 aaPredicted RBP13.74□□□□□ -0.21
CACNA1D-221ENST00000637078 NUTM2EB1AL46 878 aaPredicted RBP13.74□□□□□ -0.21
CACNA1D-221ENST00000637078 NUTM2AQ8IVF1 878 aaPredicted RBP13.74□□□□□ -0.21
CACNA1D-221ENST00000637078 MST1RQ04912 1400 aa13.73□□□□□ -0.21
CACNA1D-221ENST00000637078 AFF2P51816 1311 aa13.73□□□□□ -0.21
CACNA1D-221ENST00000637078 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
CACNA1D-221ENST00000637078 ROCK1Q13464 1354 aa13.72□□□□□ -0.21
CACNA1D-221ENST00000637078 RGS12O14924 1447 aa13.71□□□□□ -0.22
CACNA1D-221ENST00000637078 ADGRL3Q9HAR2 1447 aa13.7□□□□□ -0.22
CACNA1D-221ENST00000637078 LRRC59Q96AG4 307 aaKnown RBP13.69□□□□□ -0.22
CACNA1D-221ENST00000637078 NUP155O75694 1391 aa13.69□□□□□ -0.22
CACNA1D-221ENST00000637078 PNPLA6Q8IY17 1366 aa13.68□□□□□ -0.22
CACNA1D-221ENST00000637078 KIF1BO60333 1816 aa13.67□□□□□ -0.22
CACNA1D-221ENST00000637078 RBM6P78332 1123 aaKnown RBP13.67□□□□□ -0.22
CACNA1D-221ENST00000637078 C8orf37Q96NL8 207 aa13.67□□□□□ -0.22
CACNA1D-221ENST00000637078 LAMC1P11047 1609 aa13.67□□□□□ -0.22
CACNA1D-221ENST00000637078 NEXMIFQ5QGS0 1516 aa13.66□□□□□ -0.22
CACNA1D-221ENST00000637078 ZNF326Q5BKZ1 582 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-221ENST00000637078 METP08581 1390 aa13.66□□□□□ -0.22
CACNA1D-221ENST00000637078 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
CACNA1D-221ENST00000637078 QTRT2Q9H974 415 aaKnown RBP13.64□□□□□ -0.23
CACNA1D-221ENST00000637078 C1orf167Q5SNV9 1468 aa13.63□□□□□ -0.23
CACNA1D-221ENST00000637078 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
CACNA1D-221ENST00000637078 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
CACNA1D-221ENST00000637078 NGLY1Q96IV0 654 aa13.62□□□□□ -0.23
CACNA1D-221ENST00000637078 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
CACNA1D-221ENST00000637078 COL22A1Q8NFW1 1626 aaPredicted RBP13.61□□□□□ -0.23
CACNA1D-221ENST00000637078 ADAMTS2O95450 1211 aa13.6□□□□□ -0.23
CACNA1D-221ENST00000637078 MARF1Q9Y4F3 1742 aaKnown RBP13.6□□□□□ -0.23
CACNA1D-221ENST00000637078 FOXD1Q16676 465 aa13.59□□□□□ -0.23
CACNA1D-221ENST00000637078 ITGAEP38570 1179 aa13.58□□□□□ -0.24
CACNA1D-221ENST00000637078 USP21Q9UK80 565 aa13.58□□□□□ -0.24
CACNA1D-221ENST00000637078 TRPC5Q9UL62 973 aaPredicted RBP13.58□□□□□ -0.24
CACNA1D-221ENST00000637078 SOS2Q07890 1332 aaPredicted RBP13.58□□□□□ -0.24
CACNA1D-221ENST00000637078 PRAG1Q86YV5 1406 aa13.57□□□□□ -0.24
CACNA1D-221ENST00000637078 ATRNO75882 1429 aa13.56□□□□□ -0.24
CACNA1D-221ENST00000637078 PPLO60437 1756 aa13.55□□□□□ -0.24
CACNA1D-221ENST00000637078 CDC42BPGQ6DT37 1551 aa13.55□□□□□ -0.24
CACNA1D-221ENST00000637078 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
CACNA1D-221ENST00000637078 HFM1A2PYH4 1435 aa13.55□□□□□ -0.24
CACNA1D-221ENST00000637078 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.54□□□□□ -0.24
CACNA1D-221ENST00000637078 ORAI2Q96SN7 254 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms