RNA–Protein interactions for RNA: ENST00000637052.1

SYNGAP1-219, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-219ENST00000637052 LRP6O75581 1613 aa11.39□□□□□ -0.59
SYNGAP1-219ENST00000637052 DAPK1P53355 1430 aa11.39□□□□□ -0.59
SYNGAP1-219ENST00000637052 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
SYNGAP1-219ENST00000637052 LMTK2Q8IWU2 1503 aa11.39□□□□□ -0.59
SYNGAP1-219ENST00000637052 TRIM52Q96A61 297 aa11.38□□□□□ -0.59
SYNGAP1-219ENST00000637052 ADGRB3O60242 1522 aa11.38□□□□□ -0.59
SYNGAP1-219ENST00000637052 COL16A1Q07092 1604 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-219ENST00000637052 NKTRP30414 1462 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-219ENST00000637052 NUTM2DQ5VT03 806 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-219ENST00000637052 SLC52A1Q9NWF4 448 aa11.36□□□□□ -0.59
SYNGAP1-219ENST00000637052 ZFYVE9O95405 1425 aa11.35□□□□□ -0.59
SYNGAP1-219ENST00000637052 MEX3CQ5U5Q3 659 aaKnown RBP11.35□□□□□ -0.59
SYNGAP1-219ENST00000637052 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
SYNGAP1-219ENST00000637052 ANKRD30AQ9BXX3 1397 aa11.34□□□□□ -0.59
SYNGAP1-219ENST00000637052 PLEKHG1Q9ULL1 1385 aa11.34□□□□□ -0.59
SYNGAP1-219ENST00000637052 TBX22Q9Y458 520 aa11.34□□□□□ -0.59
SYNGAP1-219ENST00000637052 GCC2Q8IWJ2 1684 aa11.33□□□□□ -0.6
SYNGAP1-219ENST00000637052 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.33□□□□□ -0.6
SYNGAP1-219ENST00000637052 PPP1R15AO75807 674 aaPredicted RBP11.33□□□□□ -0.6
SYNGAP1-219ENST00000637052 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
SYNGAP1-219ENST00000637052 C14orf37Q86TY3 774 aa11.33□□□□□ -0.6
SYNGAP1-219ENST00000637052 FGD6Q6ZV73 1430 aa11.33□□□□□ -0.6
SYNGAP1-219ENST00000637052 TMEM131LA2VDJ0 1609 aa11.32□□□□□ -0.6
SYNGAP1-219ENST00000637052 NUTM2BA6NNL0 878 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-219ENST00000637052 NUTM2EB1AL46 878 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-219ENST00000637052 ZNF772Q68DY9 489 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-219ENST00000637052 NUTM2AQ8IVF1 878 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-219ENST00000637052 SPATA31A6Q5VVP1 1343 aa11.32□□□□□ -0.6
SYNGAP1-219ENST00000637052 RXRBP28702 533 aa11.31□□□□□ -0.6
SYNGAP1-219ENST00000637052 ADAMTS13Q76LX8 1427 aa11.31□□□□□ -0.6
SYNGAP1-219ENST00000637052 BRINP3Q76B58 766 aa11.3□□□□□ -0.6
SYNGAP1-219ENST00000637052 C19orf44Q9H6X5 657 aa11.3□□□□□ -0.6
SYNGAP1-219ENST00000637052 AHDC1Q5TGY3 1603 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-219ENST00000637052 SHPRHQ149N8 1683 aa11.3□□□□□ -0.6
SYNGAP1-219ENST00000637052 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
SYNGAP1-219ENST00000637052 NCOA3Q9Y6Q9 1424 aa11.29□□□□□ -0.6
SYNGAP1-219ENST00000637052 ATF3P18847 181 aa11.29□□□□□ -0.6
SYNGAP1-219ENST00000637052 HDGFP51858 240 aaKnown RBP11.29□□□□□ -0.6
SYNGAP1-219ENST00000637052 CADPS2Q86UW7 1296 aa11.29□□□□□ -0.6
SYNGAP1-219ENST00000637052 AMOTL2Q9Y2J4 779 aa11.29□□□□□ -0.6
SYNGAP1-219ENST00000637052 DIP2AQ14689 1571 aa11.28□□□□□ -0.6
SYNGAP1-219ENST00000637052 DDX17Q92841 729 aaKnown RBP11.28□□□□□ -0.6
SYNGAP1-219ENST00000637052 AFF2P51816 1311 aa11.28□□□□□ -0.6
SYNGAP1-219ENST00000637052 ANKRD50Q9ULJ7 1429 aa11.27□□□□□ -0.6
SYNGAP1-219ENST00000637052 ADGRL2O95490 1459 aa11.27□□□□□ -0.6
SYNGAP1-219ENST00000637052 RPRD2Q5VT52 1461 aaKnown RBP11.27□□□□□ -0.6
SYNGAP1-219ENST00000637052 APLP2Q06481 763 aa11.27□□□□□ -0.61
SYNGAP1-219ENST00000637052 FAM50AQ14320 339 aaKnown RBP11.27□□□□□ -0.61
SYNGAP1-219ENST00000637052 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.27□□□□□ -0.61
SYNGAP1-219ENST00000637052 E9PCH4 1651 aa11.25□□□□□ -0.61
SYNGAP1-219ENST00000637052 QTRT2Q9H974 415 aaKnown RBP11.24□□□□□ -0.61
SYNGAP1-219ENST00000637052 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
SYNGAP1-219ENST00000637052 C8orf37Q96NL8 207 aa11.23□□□□□ -0.61
SYNGAP1-219ENST00000637052 SRCAPQ6ZRS2 3230 aa11.23□□□□□ -0.61
SYNGAP1-219ENST00000637052 UNC13BO14795 1591 aa11.22□□□□□ -0.61
SYNGAP1-219ENST00000637052 RGS12O14924 1447 aa11.22□□□□□ -0.61
SYNGAP1-219ENST00000637052 MST1RQ04912 1400 aa11.22□□□□□ -0.61
SYNGAP1-219ENST00000637052 ASXL1Q8IXJ9 1541 aa11.22□□□□□ -0.61
SYNGAP1-219ENST00000637052 SETD5Q9C0A6 1442 aa11.22□□□□□ -0.61
SYNGAP1-219ENST00000637052 CDK12Q9NYV4 1490 aaPredicted RBP11.22□□□□□ -0.61
SYNGAP1-219ENST00000637052 NHSL1Q5SYE7 1610 aa11.21□□□□□ -0.61
SYNGAP1-219ENST00000637052 NRXN3Q9Y4C0 1643 aa11.21□□□□□ -0.61
SYNGAP1-219ENST00000637052 TRPM2O94759 1503 aa11.21□□□□□ -0.61
SYNGAP1-219ENST00000637052 METP08581 1390 aa11.2□□□□□ -0.62
SYNGAP1-219ENST00000637052 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
SYNGAP1-219ENST00000637052 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
SYNGAP1-219ENST00000637052 PNPLA6Q8IY17 1366 aa11.19□□□□□ -0.62
SYNGAP1-219ENST00000637052 XRN1Q8IZH2 1706 aaKnown RBP11.19□□□□□ -0.62
SYNGAP1-219ENST00000637052 ADAMTS2O95450 1211 aa11.19□□□□□ -0.62
SYNGAP1-219ENST00000637052 NGLY1Q96IV0 654 aa11.18□□□□□ -0.62
SYNGAP1-219ENST00000637052 DCCP43146 1447 aa11.18□□□□□ -0.62
SYNGAP1-219ENST00000637052 IQGAP3Q86VI3 1631 aa11.17□□□□□ -0.62
SYNGAP1-219ENST00000637052 NUP155O75694 1391 aa11.16□□□□□ -0.62
SYNGAP1-219ENST00000637052 ZNF326Q5BKZ1 582 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-219ENST00000637052 ORAI2Q96SN7 254 aa11.16□□□□□ -0.62
SYNGAP1-219ENST00000637052 SETBP1Q9Y6X0 1596 aa11.16□□□□□ -0.62
SYNGAP1-219ENST00000637052 NALCNQ8IZF0 1738 aa11.15□□□□□ -0.62
SYNGAP1-219ENST00000637052 ITGAEP38570 1179 aa11.15□□□□□ -0.62
SYNGAP1-219ENST00000637052 C1orf167Q5SNV9 1468 aa11.14□□□□□ -0.63
SYNGAP1-219ENST00000637052 USP21Q9UK80 565 aa11.14□□□□□ -0.63
SYNGAP1-219ENST00000637052 ADGRL3Q9HAR2 1447 aa11.14□□□□□ -0.63
SYNGAP1-219ENST00000637052 ROCK1Q13464 1354 aa11.12□□□□□ -0.63
SYNGAP1-219ENST00000637052 SPHKAPQ2M3C7 1700 aa11.12□□□□□ -0.63
SYNGAP1-219ENST00000637052 SOS2Q07890 1332 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-219ENST00000637052 FNBP4Q8N3X1 1017 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-219ENST00000637052 TRPC5Q9UL62 973 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-219ENST00000637052 ATAD2Q6PL18 1390 aa11.11□□□□□ -0.63
SYNGAP1-219ENST00000637052 EP400Q96L91 3159 aa11.11□□□□□ -0.63
SYNGAP1-219ENST00000637052 NEXMIFQ5QGS0 1516 aa11.1□□□□□ -0.63
SYNGAP1-219ENST00000637052 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
SYNGAP1-219ENST00000637052 ATRNO75882 1429 aa11.09□□□□□ -0.63
SYNGAP1-219ENST00000637052 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
SYNGAP1-219ENST00000637052 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
SYNGAP1-219ENST00000637052 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
SYNGAP1-219ENST00000637052 LAMC1P11047 1609 aa11.09□□□□□ -0.63
SYNGAP1-219ENST00000637052 XPCQ01831 940 aaPredicted RBP11.07□□□□□ -0.64
SYNGAP1-219ENST00000637052 PTCH1Q13635 1447 aa11.07□□□□□ -0.64
SYNGAP1-219ENST00000637052 BCL9LQ86UU0 1499 aa11.06□□□□□ -0.64
SYNGAP1-219ENST00000637052 KIF1BO60333 1816 aa11.05□□□□□ -0.64
SYNGAP1-219ENST00000637052 ESCO1Q5FWF5 840 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms