RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 ZFYVE9O95405 1425 aa19.24■□□□□ 0.67
CHRNA4-216ENST00000636652 RIMS2Q9UQ26 1411 aa19.24■□□□□ 0.67
CHRNA4-216ENST00000636652 ARHGAP23Q9P227 1491 aa19.23■□□□□ 0.67
CHRNA4-216ENST00000636652 DCAF11Q8TEB1 546 aa19.23■□□□□ 0.67
CHRNA4-216ENST00000636652 HDGFP51858 240 aaKnown RBP19.21■□□□□ 0.67
CHRNA4-216ENST00000636652 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.21■□□□□ 0.67
CHRNA4-216ENST00000636652 LMTK3Q96Q04 1460 aa19.21■□□□□ 0.67
CHRNA4-216ENST00000636652 MYO5BQ9ULV0 1848 aa19.21■□□□□ 0.67
CHRNA4-216ENST00000636652 IFT172Q9UG01 1749 aa19.2■□□□□ 0.66
CHRNA4-216ENST00000636652 VGFO15240 615 aaPredicted RBP19.2■□□□□ 0.66
CHRNA4-216ENST00000636652 NRXN1Q9ULB1 1477 aa19.19■□□□□ 0.66
CHRNA4-216ENST00000636652 PPLO60437 1756 aa19.19■□□□□ 0.66
CHRNA4-216ENST00000636652 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
CHRNA4-216ENST00000636652 KDM2AQ9Y2K7 1162 aa19.18■□□□□ 0.66
CHRNA4-216ENST00000636652 EID1Q9Y6B2 187 aa19.17■□□□□ 0.66
CHRNA4-216ENST00000636652 PRAG1Q86YV5 1406 aa19.17■□□□□ 0.66
CHRNA4-216ENST00000636652 SCAF11Q99590 1463 aaKnown RBP19.16■□□□□ 0.66
CHRNA4-216ENST00000636652 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
CHRNA4-216ENST00000636652 ADGRF5Q8IZF2 1346 aa19.15■□□□□ 0.66
CHRNA4-216ENST00000636652 PIK3C2GO75747 1445 aa19.15■□□□□ 0.66
CHRNA4-216ENST00000636652 NUTM2DQ5VT03 806 aaPredicted RBP19.14■□□□□ 0.65
CHRNA4-216ENST00000636652 LTKP29376 864 aa19.13■□□□□ 0.65
CHRNA4-216ENST00000636652 ANKLE2Q86XL3 938 aa19.13■□□□□ 0.65
CHRNA4-216ENST00000636652 PLEKHG1Q9ULL1 1385 aa19.13■□□□□ 0.65
CHRNA4-216ENST00000636652 NBPF8Q3BBV2 869 aa19.11■□□□□ 0.65
CHRNA4-216ENST00000636652 HSPA2P54652 639 aa19.1■□□□□ 0.65
CHRNA4-216ENST00000636652 SETBP1Q9Y6X0 1596 aa19.1■□□□□ 0.65
CHRNA4-216ENST00000636652 MED14O60244 1454 aa19.08■□□□□ 0.64
CHRNA4-216ENST00000636652 RALGAPBQ86X10 1494 aa19.08■□□□□ 0.64
CHRNA4-216ENST00000636652 C14orf93Q9H972 538 aaKnown RBP19.07■□□□□ 0.64
CHRNA4-216ENST00000636652 LAMC1P11047 1609 aa19.06■□□□□ 0.64
CHRNA4-216ENST00000636652 NPHP4O75161 1426 aaPredicted RBP19.06■□□□□ 0.64
CHRNA4-216ENST00000636652 KIAA1210Q9ULL0 1709 aa19.05■□□□□ 0.64
CHRNA4-216ENST00000636652 NRXN3Q9Y4C0 1643 aa19.05■□□□□ 0.64
CHRNA4-216ENST00000636652 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
CHRNA4-216ENST00000636652 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
CHRNA4-216ENST00000636652 NCKAP5LQ9HCH0 1330 aa19.04■□□□□ 0.64
CHRNA4-216ENST00000636652 TRPM1Q7Z4N2 1603 aa19.04■□□□□ 0.64
CHRNA4-216ENST00000636652 CFAP70Q5T0N1 1121 aa19.04■□□□□ 0.64
CHRNA4-216ENST00000636652 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
CHRNA4-216ENST00000636652 ALKQ9UM73 1620 aa19.03■□□□□ 0.64
CHRNA4-216ENST00000636652 DIP2AQ14689 1571 aa19.03■□□□□ 0.64
CHRNA4-216ENST00000636652 BCANQ96GW7 911 aa19.03■□□□□ 0.64
CHRNA4-216ENST00000636652 ROCK2O75116 1388 aaKnown RBP19.03■□□□□ 0.64
CHRNA4-216ENST00000636652 GPRASP1Q5JY77 1395 aa19.03■□□□□ 0.64
CHRNA4-216ENST00000636652 IQGAP1P46940 1657 aa19.02■□□□□ 0.64
CHRNA4-216ENST00000636652 TBX22Q9Y458 520 aa19.01■□□□□ 0.63
CHRNA4-216ENST00000636652 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
CHRNA4-216ENST00000636652 ADGRB1O14514 1584 aa19■□□□□ 0.63
CHRNA4-216ENST00000636652 NBPF1Q3BBV0 1214 aa18.99■□□□□ 0.63
CHRNA4-216ENST00000636652 SETD1AO15047 1707 aaKnown RBP18.98■□□□□ 0.63
CHRNA4-216ENST00000636652 SLC26A8Q96RN1 970 aa18.98■□□□□ 0.63
CHRNA4-216ENST00000636652 ASXL1Q8IXJ9 1541 aa18.98■□□□□ 0.63
CHRNA4-216ENST00000636652 STRCQ7RTU9 1775 aa18.96■□□□□ 0.63
CHRNA4-216ENST00000636652 METP08581 1390 aa18.96■□□□□ 0.63
CHRNA4-216ENST00000636652 PIK3R4Q99570 1358 aa18.96■□□□□ 0.63
CHRNA4-216ENST00000636652 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
CHRNA4-216ENST00000636652 TMEM132EQ6IEE7 984 aa18.94■□□□□ 0.62
CHRNA4-216ENST00000636652 LRPPRCP42704 1394 aaKnown RBP18.93■□□□□ 0.62
CHRNA4-216ENST00000636652 YTHDC2Q9H6S0 1430 aaKnown RBP18.93■□□□□ 0.62
CHRNA4-216ENST00000636652 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
CHRNA4-216ENST00000636652 ABCC11Q96J66 1382 aa18.91■□□□□ 0.62
CHRNA4-216ENST00000636652 TECPR2O15040 1411 aa18.91■□□□□ 0.62
CHRNA4-216ENST00000636652 EIF3AQ14152 1382 aaKnown RBP18.9■□□□□ 0.62
CHRNA4-216ENST00000636652 USP47Q96K76 1375 aa18.9■□□□□ 0.62
CHRNA4-216ENST00000636652 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
CHRNA4-216ENST00000636652 DLC1Q96QB1 1528 aa18.89■□□□□ 0.61
CHRNA4-216ENST00000636652 EIF4G2P78344 907 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHRNA4-216ENST00000636652 STK26Q9P289 416 aa18.87■□□□□ 0.61
CHRNA4-216ENST00000636652 TRAK1Q9UPV9 953 aa18.87■□□□□ 0.61
CHRNA4-216ENST00000636652 KNDC1Q76NI1 1749 aa18.86■□□□□ 0.61
CHRNA4-216ENST00000636652 XRN1Q8IZH2 1706 aaKnown RBP18.86■□□□□ 0.61
CHRNA4-216ENST00000636652 NWD1Q149M9 1564 aa18.86■□□□□ 0.61
CHRNA4-216ENST00000636652 CPS1P31327 1500 aa18.86■□□□□ 0.61
CHRNA4-216ENST00000636652 PTCH1Q13635 1447 aa18.86■□□□□ 0.61
CHRNA4-216ENST00000636652 KCNA6P17658 529 aa18.86■□□□□ 0.61
CHRNA4-216ENST00000636652 SIRT1Q96EB6 747 aa18.86■□□□□ 0.61
CHRNA4-216ENST00000636652 AMOTL2Q9Y2J4 779 aa18.86■□□□□ 0.61
CHRNA4-216ENST00000636652 FAM135BQ49AJ0 1406 aa18.85■□□□□ 0.61
CHRNA4-216ENST00000636652 HSPA5P11021 654 aaKnown RBP18.83■□□□□ 0.6
CHRNA4-216ENST00000636652 NKTRP30414 1462 aaKnown RBP18.83■□□□□ 0.6
CHRNA4-216ENST00000636652 ROBO2Q9HCK4 1378 aa18.82■□□□□ 0.6
CHRNA4-216ENST00000636652 ARHGEF28Q8N1W1 1705 aaKnown RBP18.82■□□□□ 0.6
CHRNA4-216ENST00000636652 CHD2O14647 1828 aaKnown RBP18.81■□□□□ 0.6
CHRNA4-216ENST00000636652 CENPJQ9HC77 1338 aaPredicted RBP18.81■□□□□ 0.6
CHRNA4-216ENST00000636652 ST20-MTHFSA0A0A6YYL1 179 aa18.8■□□□□ 0.6
CHRNA4-216ENST00000636652 PRAM1Q96QH2 718 aa18.8■□□□□ 0.6
CHRNA4-216ENST00000636652 SBNO2Q9Y2G9 1366 aa18.8■□□□□ 0.6
CHRNA4-216ENST00000636652 POGKQ9P215 609 aa18.79■□□□□ 0.6
CHRNA4-216ENST00000636652 PLEKHH1Q9ULM0 1364 aa18.77■□□□□ 0.6
CHRNA4-216ENST00000636652 ZNF335Q9H4Z2 1342 aaPredicted RBP18.76■□□□□ 0.59
CHRNA4-216ENST00000636652 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
CHRNA4-216ENST00000636652 WAPLQ7Z5K2 1190 aa18.76■□□□□ 0.59
CHRNA4-216ENST00000636652 TESK2Q96S53 571 aa18.76■□□□□ 0.59
CHRNA4-216ENST00000636652 QRICH2Q9H0J4 1663 aa18.73■□□□□ 0.59
CHRNA4-216ENST00000636652 HIRIP3Q9BW71 556 aaPredicted RBP18.73■□□□□ 0.59
CHRNA4-216ENST00000636652 NCOA3Q9Y6Q9 1424 aa18.73■□□□□ 0.59
CHRNA4-216ENST00000636652 STRCP1A6NGW2 1772 aa18.73■□□□□ 0.59
CHRNA4-216ENST00000636652 SAFB2Q14151 953 aaKnown RBP eCLIP18.72■□□□□ 0.59
CHRNA4-216ENST00000636652 PROSER2Q86WR7 435 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms