RNA–Protein interactions for RNA: ENST00000636473.1

CACNA1A-226, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-226ENST00000636473 NEXMIFQ5QGS0 1516 aa24.29■■□□□ 1.48
CACNA1A-226ENST00000636473 RPGRIP1LQ68CZ1 1315 aa24.29■■□□□ 1.48
CACNA1A-226ENST00000636473 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
CACNA1A-226ENST00000636473 L3MBTL2Q969R5 705 aa24.27■■□□□ 1.48
CACNA1A-226ENST00000636473 TXNDC2Q86VQ3 553 aa24.27■■□□□ 1.48
CACNA1A-226ENST00000636473 DCAF11Q8TEB1 546 aa24.27■■□□□ 1.48
CACNA1A-226ENST00000636473 PPLO60437 1756 aa24.27■■□□□ 1.48
CACNA1A-226ENST00000636473 IFT172Q9UG01 1749 aa24.26■■□□□ 1.47
CACNA1A-226ENST00000636473 LTKP29376 864 aa24.26■■□□□ 1.47
CACNA1A-226ENST00000636473 EID1Q9Y6B2 187 aa24.26■■□□□ 1.47
CACNA1A-226ENST00000636473 HDGFP51858 240 aaKnown RBP24.25■■□□□ 1.47
CACNA1A-226ENST00000636473 ANKLE2Q86XL3 938 aa24.25■■□□□ 1.47
CACNA1A-226ENST00000636473 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.25■■□□□ 1.47
CACNA1A-226ENST00000636473 PPP1R15AO75807 674 aaPredicted RBP24.24■■□□□ 1.47
CACNA1A-226ENST00000636473 KDM2AQ9Y2K7 1162 aa24.24■■□□□ 1.47
CACNA1A-226ENST00000636473 SCAF11Q99590 1463 aaKnown RBP24.23■■□□□ 1.47
CACNA1A-226ENST00000636473 NCKAP5LQ9HCH0 1330 aa24.22■■□□□ 1.47
CACNA1A-226ENST00000636473 VGFO15240 615 aaPredicted RBP24.21■■□□□ 1.47
CACNA1A-226ENST00000636473 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
CACNA1A-226ENST00000636473 ZEB1P37275 1124 aaPredicted RBP24.21■■□□□ 1.47
CACNA1A-226ENST00000636473 POLR1AO95602 1720 aaPredicted RBP24.2■■□□□ 1.47
CACNA1A-226ENST00000636473 ADGRF5Q8IZF2 1346 aa24.2■■□□□ 1.46
CACNA1A-226ENST00000636473 MYOM2P54296 1465 aa24.19■■□□□ 1.46
CACNA1A-226ENST00000636473 TIMELESSQ9UNS1 1208 aa24.18■■□□□ 1.46
CACNA1A-226ENST00000636473 STAC3Q96MF2 364 aa24.17■■□□□ 1.46
CACNA1A-226ENST00000636473 STRCQ7RTU9 1775 aa24.17■■□□□ 1.46
CACNA1A-226ENST00000636473 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
CACNA1A-226ENST00000636473 BCANQ96GW7 911 aa24.15■■□□□ 1.46
CACNA1A-226ENST00000636473 NPHP4O75161 1426 aaPredicted RBP24.14■■□□□ 1.45
CACNA1A-226ENST00000636473 MED14O60244 1454 aa24.13■■□□□ 1.45
CACNA1A-226ENST00000636473 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
CACNA1A-226ENST00000636473 PIK3C2GO75747 1445 aa24.12■■□□□ 1.45
CACNA1A-226ENST00000636473 IQGAP1P46940 1657 aa24.11■■□□□ 1.45
CACNA1A-226ENST00000636473 PRAG1Q86YV5 1406 aa24.1■■□□□ 1.45
CACNA1A-226ENST00000636473 SETBP1Q9Y6X0 1596 aa24.09■■□□□ 1.45
CACNA1A-226ENST00000636473 NRXN3Q9Y4C0 1643 aa24.09■■□□□ 1.45
CACNA1A-226ENST00000636473 SLC26A8Q96RN1 970 aa24.08■■□□□ 1.45
CACNA1A-226ENST00000636473 NBPF8Q3BBV2 869 aa24.07■■□□□ 1.44
CACNA1A-226ENST00000636473 ADAMTS13Q76LX8 1427 aa24.07■■□□□ 1.44
CACNA1A-226ENST00000636473 CFAP70Q5T0N1 1121 aa24.05■■□□□ 1.44
CACNA1A-226ENST00000636473 ALKQ9UM73 1620 aa24.05■■□□□ 1.44
CACNA1A-226ENST00000636473 C14orf93Q9H972 538 aaKnown RBP24.04■■□□□ 1.44
CACNA1A-226ENST00000636473 DMRT2Q9Y5R5 561 aa24.03■■□□□ 1.44
CACNA1A-226ENST00000636473 TBX22Q9Y458 520 aa24.02■■□□□ 1.44
CACNA1A-226ENST00000636473 DIP2AQ14689 1571 aa24.01■■□□□ 1.43
CACNA1A-226ENST00000636473 LAMC1P11047 1609 aa24.01■■□□□ 1.43
CACNA1A-226ENST00000636473 SETD1AO15047 1707 aaKnown RBP24.01■■□□□ 1.43
CACNA1A-226ENST00000636473 TRPM1Q7Z4N2 1603 aa23.99■■□□□ 1.43
CACNA1A-226ENST00000636473 KIAA1210Q9ULL0 1709 aa23.98■■□□□ 1.43
CACNA1A-226ENST00000636473 METP08581 1390 aa23.98■■□□□ 1.43
CACNA1A-226ENST00000636473 NBPF1Q3BBV0 1214 aa23.98■■□□□ 1.43
CACNA1A-226ENST00000636473 TMEM132EQ6IEE7 984 aa23.98■■□□□ 1.43
CACNA1A-226ENST00000636473 ASXL1Q8IXJ9 1541 aa23.96■■□□□ 1.43
CACNA1A-226ENST00000636473 RALGAPBQ86X10 1494 aa23.94■■□□□ 1.42
CACNA1A-226ENST00000636473 ROCK2O75116 1388 aaKnown RBP23.94■■□□□ 1.42
CACNA1A-226ENST00000636473 ADGRB1O14514 1584 aa23.93■■□□□ 1.42
CACNA1A-226ENST00000636473 PIK3R4Q99570 1358 aa23.92■■□□□ 1.42
CACNA1A-226ENST00000636473 PTPRUQ92729 1446 aa23.92■■□□□ 1.42
CACNA1A-226ENST00000636473 STK26Q9P289 416 aa23.9■■□□□ 1.42
CACNA1A-226ENST00000636473 CHD2O14647 1828 aaKnown RBP23.89■■□□□ 1.42
CACNA1A-226ENST00000636473 YTHDC2Q9H6S0 1430 aaKnown RBP23.89■■□□□ 1.42
CACNA1A-226ENST00000636473 AMOTL2Q9Y2J4 779 aa23.89■■□□□ 1.41
CACNA1A-226ENST00000636473 CARD11Q9BXL7 1154 aa23.88■■□□□ 1.41
CACNA1A-226ENST00000636473 ZNF335Q9H4Z2 1342 aaPredicted RBP23.88■■□□□ 1.41
CACNA1A-226ENST00000636473 GPRASP1Q5JY77 1395 aa23.88■■□□□ 1.41
CACNA1A-226ENST00000636473 LRPPRCP42704 1394 aaKnown RBP23.87■■□□□ 1.41
CACNA1A-226ENST00000636473 KCNA6P17658 529 aa23.87■■□□□ 1.41
CACNA1A-226ENST00000636473 XRN1Q8IZH2 1706 aaKnown RBP23.85■■□□□ 1.41
CACNA1A-226ENST00000636473 TRAK1Q9UPV9 953 aa23.85■■□□□ 1.41
CACNA1A-226ENST00000636473 NWD1Q149M9 1564 aa23.85■■□□□ 1.41
CACNA1A-226ENST00000636473 STRCP1A6NGW2 1772 aa23.84■■□□□ 1.41
CACNA1A-226ENST00000636473 ABCC11Q96J66 1382 aa23.83■■□□□ 1.41
CACNA1A-226ENST00000636473 KNDC1Q76NI1 1749 aa23.81■■□□□ 1.4
CACNA1A-226ENST00000636473 TECPR2O15040 1411 aa23.8■■□□□ 1.4
CACNA1A-226ENST00000636473 ROBO2Q9HCK4 1378 aa23.79■■□□□ 1.4
CACNA1A-226ENST00000636473 CPS1P31327 1500 aa23.79■■□□□ 1.4
CACNA1A-226ENST00000636473 NKTRP30414 1462 aaKnown RBP23.79■■□□□ 1.4
CACNA1A-226ENST00000636473 DLC1Q96QB1 1528 aa23.78■■□□□ 1.4
CACNA1A-226ENST00000636473 PTCH1Q13635 1447 aa23.78■■□□□ 1.4
CACNA1A-226ENST00000636473 ARHGEF28Q8N1W1 1705 aaKnown RBP23.77■■□□□ 1.4
CACNA1A-226ENST00000636473 WAPLQ7Z5K2 1190 aa23.76■■□□□ 1.39
CACNA1A-226ENST00000636473 PROSER2Q86WR7 435 aaPredicted RBP23.76■■□□□ 1.39
CACNA1A-226ENST00000636473 PRAM1Q96QH2 718 aa23.76■■□□□ 1.39
CACNA1A-226ENST00000636473 USP47Q96K76 1375 aa23.75■■□□□ 1.39
CACNA1A-226ENST00000636473 RBM33Q96EV2 1170 aaKnown RBP23.75■■□□□ 1.39
CACNA1A-226ENST00000636473 PLEKHH1Q9ULM0 1364 aa23.74■■□□□ 1.39
CACNA1A-226ENST00000636473 FAM135BQ49AJ0 1406 aa23.74■■□□□ 1.39
CACNA1A-226ENST00000636473 SIRT1Q96EB6 747 aa23.74■■□□□ 1.39
CACNA1A-226ENST00000636473 POGKQ9P215 609 aa23.74■■□□□ 1.39
CACNA1A-226ENST00000636473 LTBP4Q8N2S1 1624 aa23.74■■□□□ 1.39
CACNA1A-226ENST00000636473 EIF3AQ14152 1382 aaKnown RBP23.74■■□□□ 1.39
CACNA1A-226ENST00000636473 SAFB2Q14151 953 aaKnown RBP eCLIP23.73■■□□□ 1.39
CACNA1A-226ENST00000636473 LRRC7Q96NW7 1537 aa23.71■■□□□ 1.39
CACNA1A-226ENST00000636473 CENPJQ9HC77 1338 aaPredicted RBP23.7■■□□□ 1.38
CACNA1A-226ENST00000636473 TMEM94Q12767 1356 aa23.7■■□□□ 1.38
CACNA1A-226ENST00000636473 EIF4G2P78344 907 aaKnown RBP eCLIP23.69■■□□□ 1.38
CACNA1A-226ENST00000636473 ST20-MTHFSA0A0A6YYL1 179 aa23.68■■□□□ 1.38
CACNA1A-226ENST00000636473 HSPA5P11021 654 aaKnown RBP23.67■■□□□ 1.38
CACNA1A-226ENST00000636473 C14orf37Q86TY3 774 aa23.67■■□□□ 1.38
CACNA1A-226ENST00000636473 QRICH2Q9H0J4 1663 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms