RNA–Protein interactions for RNA: ENST00000636400.2

TCF4-278, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,343 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-278ENST00000636400 TRAK1Q9UPV9 953 aa8.41□□□□□ -1.06
TCF4-278ENST00000636400 SNAPC4Q5SXM2 1469 aa8.41□□□□□ -1.06
TCF4-278ENST00000636400 REC8O95072 547 aa8.41□□□□□ -1.06
TCF4-278ENST00000636400 NAP1L5Q96NT1 182 aaPredicted RBP8.41□□□□□ -1.06
TCF4-278ENST00000636400 SMG6Q86US8 1419 aaKnown RBP8.41□□□□□ -1.06
TCF4-278ENST00000636400 PRG4Q92954 1404 aaPredicted RBP8.41□□□□□ -1.06
TCF4-278ENST00000636400 ARAP1Q96P48 1450 aa8.41□□□□□ -1.06
TCF4-278ENST00000636400 ZKSCAN2Q63HK3 967 aa8.41□□□□□ -1.06
TCF4-278ENST00000636400 DDX58O95786 925 aaKnown RBP8.41□□□□□ -1.06
TCF4-278ENST00000636400 TEFQ10587 303 aa8.41□□□□□ -1.06
TCF4-278ENST00000636400 RUFY2Q8WXA3 655 aa8.41□□□□□ -1.06
TCF4-278ENST00000636400 BRD4O60885 1362 aaPredicted RBP8.4□□□□□ -1.06
TCF4-278ENST00000636400 KIAA0586Q9BVV6 1533 aa8.4□□□□□ -1.06
TCF4-278ENST00000636400 POGZQ7Z3K3 1410 aa8.4□□□□□ -1.06
TCF4-278ENST00000636400 RAPGEF6Q8TEU7 1601 aa8.4□□□□□ -1.06
TCF4-278ENST00000636400 PRKRIP1Q9H875 184 aaPredicted RBP8.4□□□□□ -1.06
TCF4-278ENST00000636400 G3V3G9 751 aa8.4□□□□□ -1.07
TCF4-278ENST00000636400 DCAF8Q5TAQ9 597 aa8.4□□□□□ -1.07
TCF4-278ENST00000636400 TTC5Q8N0Z6 440 aa8.4□□□□□ -1.07
TCF4-278ENST00000636400 ISY1Q9ULR0 285 aaKnown RBP8.4□□□□□ -1.07
TCF4-278ENST00000636400 KIF1BO60333 1816 aa8.4□□□□□ -1.07
TCF4-278ENST00000636400 RBM19Q9Y4C8 960 aaKnown RBP8.39□□□□□ -1.07
TCF4-278ENST00000636400 HSP90B1P14625 803 aaKnown RBP8.39□□□□□ -1.07
TCF4-278ENST00000636400 AMOTL1Q8IY63 956 aa8.39□□□□□ -1.07
TCF4-278ENST00000636400 KIAA1107Q9UPP5 1409 aa8.39□□□□□ -1.07
TCF4-278ENST00000636400 IPO9Q96P70 1041 aaKnown RBP8.39□□□□□ -1.07
TCF4-278ENST00000636400 EIF2AK4Q9P2K8 1649 aaKnown RBP8.39□□□□□ -1.07
TCF4-278ENST00000636400 GTF2E1P29083 439 aaPredicted RBP8.39□□□□□ -1.07
TCF4-278ENST00000636400 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
TCF4-278ENST00000636400 EVA1CP58658 441 aa8.38□□□□□ -1.07
TCF4-278ENST00000636400 SKOR2Q2VWA4 1001 aaPredicted RBP8.38□□□□□ -1.07
TCF4-278ENST00000636400 HMGB2P26583 209 aaKnown RBP8.38□□□□□ -1.07
TCF4-278ENST00000636400 SLC4A10Q6U841 1118 aa8.38□□□□□ -1.07
TCF4-278ENST00000636400 AEBP2Q6ZN18 517 aaPredicted RBP8.38□□□□□ -1.07
TCF4-278ENST00000636400 PSME1Q06323 249 aa8.38□□□□□ -1.07
TCF4-278ENST00000636400 ZNF330Q9Y3S2 320 aaPredicted RBP8.38□□□□□ -1.07
TCF4-278ENST00000636400 SENP3-EIF4A1A0A087X0R7 540 aa8.38□□□□□ -1.07
TCF4-278ENST00000636400 CCDC7Q96M83 1385 aa8.38□□□□□ -1.07
TCF4-278ENST00000636400 TPRNQ4KMQ1 711 aa8.38□□□□□ -1.07
TCF4-278ENST00000636400 RUNDC1Q96C34 613 aa8.38□□□□□ -1.07
TCF4-278ENST00000636400 APBB1O00213 710 aa8.37□□□□□ -1.07
TCF4-278ENST00000636400 DIAPH1O60610 1272 aaKnown RBP8.37□□□□□ -1.07
TCF4-278ENST00000636400 CPLX2Q6PUV4 134 aaKnown RBP8.37□□□□□ -1.07
TCF4-278ENST00000636400 WDR97A6NE52 1622 aa8.37□□□□□ -1.07
TCF4-278ENST00000636400 API5Q9BZZ5 524 aaKnown RBP8.37□□□□□ -1.07
TCF4-278ENST00000636400 FAM161AQ3B820 660 aa8.37□□□□□ -1.07
TCF4-278ENST00000636400 HSP90AB4PQ58FF6 505 aa8.37□□□□□ -1.07
TCF4-278ENST00000636400 C9orf78Q9NZ63 289 aaPredicted RBP8.37□□□□□ -1.07
TCF4-278ENST00000636400 CCDC9Q9Y3X0 531 aaKnown RBP8.37□□□□□ -1.07
TCF4-278ENST00000636400 MYO5CQ9NQX4 1742 aa8.37□□□□□ -1.07
TCF4-278ENST00000636400 TULP1O00294 542 aaPredicted RBP8.37□□□□□ -1.07
TCF4-278ENST00000636400 CLSTN1O94985 981 aa8.36□□□□□ -1.07
TCF4-278ENST00000636400 NOL10Q9BSC4 688 aaKnown RBP8.36□□□□□ -1.07
TCF4-278ENST00000636400 CYB5RLQ6IPT4 315 aa8.36□□□□□ -1.07
TCF4-278ENST00000636400 RNF20Q5VTR2 975 aa8.36□□□□□ -1.07
TCF4-278ENST00000636400 RRP1P56182 461 aaKnown RBP8.36□□□□□ -1.07
TCF4-278ENST00000636400 FRAT2O75474 233 aaPredicted RBP8.36□□□□□ -1.07
TCF4-278ENST00000636400 GNAI1P63096 354 aa8.36□□□□□ -1.07
TCF4-278ENST00000636400 SLC52A1Q9NWF4 448 aa8.36□□□□□ -1.07
TCF4-278ENST00000636400 GPRASP1Q5JY77 1395 aa8.36□□□□□ -1.07
TCF4-278ENST00000636400 FAM69CQ0P6D2 419 aa8.36□□□□□ -1.07
TCF4-278ENST00000636400 ZKSCAN1P17029 563 aaPredicted RBP8.35□□□□□ -1.07
TCF4-278ENST00000636400 ATF3P18847 181 aa8.35□□□□□ -1.07
TCF4-278ENST00000636400 CCDC146Q8IYE0 955 aa8.35□□□□□ -1.07
TCF4-278ENST00000636400 HOOK1Q9UJC3 728 aaKnown RBP8.35□□□□□ -1.07
TCF4-278ENST00000636400 ANKRD30BQ9BXX2 1392 aa8.35□□□□□ -1.07
TCF4-278ENST00000636400 MFAP1P55081 439 aaKnown RBP8.35□□□□□ -1.07
TCF4-278ENST00000636400 CAMSAP2Q08AD1 1489 aa8.35□□□□□ -1.07
TCF4-278ENST00000636400 TAOK2Q9UL54 1235 aa8.35□□□□□ -1.07
TCF4-278ENST00000636400 AKAP17AQ02040 695 aaKnown RBP8.35□□□□□ -1.07
TCF4-278ENST00000636400 DIAPH3Q9NSV4 1193 aa8.34□□□□□ -1.07
TCF4-278ENST00000636400 GOLGA6L3A6NEY3 463 aa8.34□□□□□ -1.07
TCF4-278ENST00000636400 NOC3LQ8WTT2 800 aaKnown RBP8.34□□□□□ -1.07
TCF4-278ENST00000636400 H3BQV1 296 aa8.34□□□□□ -1.07
TCF4-278ENST00000636400 IFFO2Q5TF58 517 aa8.34□□□□□ -1.07
TCF4-278ENST00000636400 SYNE3Q6ZMZ3 975 aa8.34□□□□□ -1.07
TCF4-278ENST00000636400 RASSF8Q8NHQ8 419 aa8.34□□□□□ -1.07
TCF4-278ENST00000636400 MINK1Q8N4C8 1332 aaPredicted RBP8.34□□□□□ -1.07
TCF4-278ENST00000636400 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
TCF4-278ENST00000636400 TSR1Q2NL82 804 aaKnown RBP8.33□□□□□ -1.08
TCF4-278ENST00000636400 RPGRIP1LQ68CZ1 1315 aa8.33□□□□□ -1.08
TCF4-278ENST00000636400 ERC2O15083 957 aa8.33□□□□□ -1.08
TCF4-278ENST00000636400 TPM3P06753 285 aa8.33□□□□□ -1.08
TCF4-278ENST00000636400 CFAP74Q9C0B2 1584 aa8.33□□□□□ -1.08
TCF4-278ENST00000636400 TPM2P07951 284 aa8.33□□□□□ -1.08
TCF4-278ENST00000636400 TPM1P09493 284 aa8.33□□□□□ -1.08
TCF4-278ENST00000636400 GRIN2AQ12879 1464 aa8.33□□□□□ -1.08
TCF4-278ENST00000636400 SF3A1Q15459 793 aaKnown RBP8.32□□□□□ -1.08
TCF4-278ENST00000636400 LTV1Q96GA3 475 aaPredicted RBP8.32□□□□□ -1.08
TCF4-278ENST00000636400 GOLGA6L1Q8N7Z2 621 aa8.32□□□□□ -1.08
TCF4-278ENST00000636400 DZIP1LQ8IYY4 767 aaKnown RBP8.32□□□□□ -1.08
TCF4-278ENST00000636400 FAM184AQ8NB25 1140 aa8.32□□□□□ -1.08
TCF4-278ENST00000636400 ANKRD45Q5TZF3 282 aa8.32□□□□□ -1.08
TCF4-278ENST00000636400 SLKQ9H2G2 1235 aaPredicted RBP8.31□□□□□ -1.08
TCF4-278ENST00000636400 TRDNQ13061 729 aa8.31□□□□□ -1.08
TCF4-278ENST00000636400 NUTM2DQ5VT03 806 aaPredicted RBP8.31□□□□□ -1.08
TCF4-278ENST00000636400 RIPK4P57078 832 aa8.31□□□□□ -1.08
TCF4-278ENST00000636400 CLUAP1Q96AJ1 413 aa8.31□□□□□ -1.08
TCF4-278ENST00000636400 GOLGA6L19H0YKK7 550 aa8.31□□□□□ -1.08
TCF4-278ENST00000636400 SPRYD3Q8NCJ5 442 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms