RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 EIF3AQ14152 1382 aaKnown RBP21.35■■□□□ 1.01
CACNA1A-225ENST00000636389 GOLGA3Q08378 1498 aa21.35■■□□□ 1.01
CACNA1A-225ENST00000636389 PPP1R1BQ9UD71 204 aaPredicted RBP21.35■■□□□ 1.01
CACNA1A-225ENST00000636389 NEFHP12036 1026 aa21.34■■□□□ 1.01
CACNA1A-225ENST00000636389 BICD2Q8TD16 824 aa21.34■■□□□ 1.01
CACNA1A-225ENST00000636389 NEXNQ0ZGT2 675 aa21.34■■□□□ 1.01
CACNA1A-225ENST00000636389 CCDC27Q2M243 656 aa21.34■■□□□ 1.01
CACNA1A-225ENST00000636389 EIF2S2P20042 333 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-225ENST00000636389 FOXD1Q16676 465 aa21.34■■□□□ 1.01
CACNA1A-225ENST00000636389 NOM1Q5C9Z4 860 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-225ENST00000636389 ANKRD62A6NC57 917 aa21.33■■□□□ 1
CACNA1A-225ENST00000636389 KDM4AO75164 1064 aa21.32■■□□□ 1
CACNA1A-225ENST00000636389 ZRSR2Q15696 482 aaKnown RBP21.31■■□□□ 1
CACNA1A-225ENST00000636389 CENPJQ9HC77 1338 aaPredicted RBP21.31■■□□□ 1
CACNA1A-225ENST00000636389 DCTN1Q14203 1278 aa21.31■■□□□ 1
CACNA1A-225ENST00000636389 MYO6Q9UM54 1294 aa21.29■■□□□ 1
CACNA1A-225ENST00000636389 H0YHG0 523 aa21.29■■□□□ 1
CACNA1A-225ENST00000636389 PDILTQ8N807 584 aa21.29■■□□□ 1
CACNA1A-225ENST00000636389 ELL2O00472 640 aaPredicted RBP21.29■■□□□ 1
CACNA1A-225ENST00000636389 RRP7AQ9Y3A4 280 aaKnown RBP21.27■■□□□ 1
CACNA1A-225ENST00000636389 SASS6Q6UVJ0 657 aa21.27■■□□□ 1
CACNA1A-225ENST00000636389 TEFQ10587 303 aa21.26■□□□□ 0.99
CACNA1A-225ENST00000636389 RUFY2Q8WXA3 655 aa21.26■□□□□ 0.99
CACNA1A-225ENST00000636389 ACBD3Q9H3P7 528 aa21.26■□□□□ 0.99
CACNA1A-225ENST00000636389 IFIT2P09913 472 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-225ENST00000636389 SAFBQ15424 915 aaKnown RBP eCLIP21.26■□□□□ 0.99
CACNA1A-225ENST00000636389 SEPT7Q16181 437 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-225ENST00000636389 HSP90B2PQ58FF3 399 aa21.26■□□□□ 0.99
CACNA1A-225ENST00000636389 CEP162Q5TB80 1403 aa21.25■□□□□ 0.99
CACNA1A-225ENST00000636389 SYCP1Q15431 976 aa21.25■□□□□ 0.99
CACNA1A-225ENST00000636389 ZKSCAN1P17029 563 aaPredicted RBP21.25■□□□□ 0.99
CACNA1A-225ENST00000636389 DHX37Q8IY37 1157 aaKnown RBP21.25■□□□□ 0.99
CACNA1A-225ENST00000636389 BRMS1Q9HCU9 246 aa21.24■□□□□ 0.99
CACNA1A-225ENST00000636389 EEA1Q15075 1411 aa21.23■□□□□ 0.99
CACNA1A-225ENST00000636389 MNS1Q8NEH6 495 aa21.23■□□□□ 0.99
CACNA1A-225ENST00000636389 PLIN1O60240 522 aa21.23■□□□□ 0.99
CACNA1A-225ENST00000636389 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
CACNA1A-225ENST00000636389 IFT57Q9NWB7 429 aa21.22■□□□□ 0.99
CACNA1A-225ENST00000636389 FAM13BQ9NYF5 915 aa21.22■□□□□ 0.99
CACNA1A-225ENST00000636389 IBSPP21815 317 aaPredicted RBP21.22■□□□□ 0.99
CACNA1A-225ENST00000636389 OLFM4Q6UX06 510 aa21.21■□□□□ 0.99
CACNA1A-225ENST00000636389 BCL2L13Q9BXK5 485 aa21.21■□□□□ 0.99
CACNA1A-225ENST00000636389 PKD2Q13563 968 aa21.21■□□□□ 0.99
CACNA1A-225ENST00000636389 ENOX2Q16206 610 aaKnown RBP21.2■□□□□ 0.98
CACNA1A-225ENST00000636389 IPO9Q96P70 1041 aaKnown RBP21.2■□□□□ 0.98
CACNA1A-225ENST00000636389 RALBP1Q15311 655 aa21.2■□□□□ 0.98
CACNA1A-225ENST00000636389 VPS37CA5D8V6 355 aaPredicted RBP21.2■□□□□ 0.98
CACNA1A-225ENST00000636389 ARGLU1Q9NWB6 273 aaPredicted RBP21.2■□□□□ 0.98
CACNA1A-225ENST00000636389 RNF20Q5VTR2 975 aa21.18■□□□□ 0.98
CACNA1A-225ENST00000636389 CDK5RAP3Q96JB5 506 aa21.18■□□□□ 0.98
CACNA1A-225ENST00000636389 SKOR2Q2VWA4 1001 aaPredicted RBP21.18■□□□□ 0.98
CACNA1A-225ENST00000636389 CGNL1Q0VF96 1302 aa21.17■□□□□ 0.98
CACNA1A-225ENST00000636389 HSP90AB3PQ58FF7 597 aa21.16■□□□□ 0.98
CACNA1A-225ENST00000636389 RALYLQ86SE5 291 aaKnown RBP21.15■□□□□ 0.98
CACNA1A-225ENST00000636389 ATP2B2Q01814 1243 aa21.15■□□□□ 0.98
CACNA1A-225ENST00000636389 G3BP1Q13283 466 aaKnown RBP eCLIP21.15■□□□□ 0.98
CACNA1A-225ENST00000636389 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
CACNA1A-225ENST00000636389 BRPF1P55201 1214 aaPredicted RBP21.14■□□□□ 0.98
CACNA1A-225ENST00000636389 XBP1P17861 261 aa21.14■□□□□ 0.97
CACNA1A-225ENST00000636389 RSPH6AQ9H0K4 717 aa21.14■□□□□ 0.97
CACNA1A-225ENST00000636389 WASHC4Q2M389 1173 aa21.14■□□□□ 0.97
CACNA1A-225ENST00000636389 PSME1Q06323 249 aa21.13■□□□□ 0.97
CACNA1A-225ENST00000636389 COG3Q96JB2 828 aa21.13■□□□□ 0.97
CACNA1A-225ENST00000636389 DDX58O95786 925 aaKnown RBP21.13■□□□□ 0.97
CACNA1A-225ENST00000636389 ANKRD18AQ8IVF6 992 aa21.13■□□□□ 0.97
CACNA1A-225ENST00000636389 NEUROD6Q96NK8 337 aa21.13■□□□□ 0.97
CACNA1A-225ENST00000636389 KRT18P05783 430 aaKnown RBP21.12■□□□□ 0.97
CACNA1A-225ENST00000636389 WASHC2CQ9Y4E1 1318 aa21.12■□□□□ 0.97
CACNA1A-225ENST00000636389 TSPYL1Q9H0U9 437 aa21.12■□□□□ 0.97
CACNA1A-225ENST00000636389 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
CACNA1A-225ENST00000636389 SMC3Q9UQE7 1217 aa21.11■□□□□ 0.97
CACNA1A-225ENST00000636389 NEBLO76041 1014 aa21.11■□□□□ 0.97
CACNA1A-225ENST00000636389 MAGEC2Q9UBF1 373 aaPredicted RBP21.11■□□□□ 0.97
CACNA1A-225ENST00000636389 NAT10Q9H0A0 1025 aaKnown RBP21.11■□□□□ 0.97
CACNA1A-225ENST00000636389 MATR3P43243 847 aaKnown RBP eCLIP21.11■□□□□ 0.97
CACNA1A-225ENST00000636389 CCDC73Q6ZRK6 1079 aa21.1■□□□□ 0.97
CACNA1A-225ENST00000636389 TRAK1Q9UPV9 953 aa21.1■□□□□ 0.97
CACNA1A-225ENST00000636389 REC8O95072 547 aa21.1■□□□□ 0.97
CACNA1A-225ENST00000636389 WDR70Q9NW82 654 aa21.1■□□□□ 0.97
CACNA1A-225ENST00000636389 PDCL3Q9H2J4 239 aa21.1■□□□□ 0.97
CACNA1A-225ENST00000636389 ERLIN2O94905 339 aa21.09■□□□□ 0.97
CACNA1A-225ENST00000636389 AXDND1Q5T1B0 1012 aaPredicted RBP21.09■□□□□ 0.97
CACNA1A-225ENST00000636389 TIMELESSQ9UNS1 1208 aa21.09■□□□□ 0.97
CACNA1A-225ENST00000636389 CWC15Q9P013 229 aaKnown RBP21.08■□□□□ 0.97
CACNA1A-225ENST00000636389 KIF3BO15066 747 aa21.08■□□□□ 0.97
CACNA1A-225ENST00000636389 HSP90AB4PQ58FF6 505 aa21.08■□□□□ 0.97
CACNA1A-225ENST00000636389 FAM177BA6PVY3 158 aa21.08■□□□□ 0.96
CACNA1A-225ENST00000636389 ARHGAP35Q9NRY4 1499 aa21.08■□□□□ 0.96
CACNA1A-225ENST00000636389 AIMP1Q12904 312 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-225ENST00000636389 GBP2P32456 591 aaPredicted RBP21.06■□□□□ 0.96
CACNA1A-225ENST00000636389 ZHX3Q9H4I2 956 aa21.06■□□□□ 0.96
CACNA1A-225ENST00000636389 ERCC4Q92889 916 aaPredicted RBP21.05■□□□□ 0.96
CACNA1A-225ENST00000636389 CHMP5Q9NZZ3 219 aa21.05■□□□□ 0.96
CACNA1A-225ENST00000636389 GOLGA6L10A6NI86 522 aa21.05■□□□□ 0.96
CACNA1A-225ENST00000636389 CCER2I3L3R5 266 aa21.05■□□□□ 0.96
CACNA1A-225ENST00000636389 NUP155O75694 1391 aa21.05■□□□□ 0.96
CACNA1A-225ENST00000636389 SPDYE4A6NLX3 237 aa21.05■□□□□ 0.96
CACNA1A-225ENST00000636389 RIC3Q7Z5B4 369 aa21.05■□□□□ 0.96
CACNA1A-225ENST00000636389 HMGN5P82970 282 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-225ENST00000636389 CENPHQ9H3R5 247 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms