RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	IQGAP3	Q86VI3	1631 aa		11.24	□□□□□ -0.61
CACNA1A-222	ENST00000636022		E9PCH4	1651 aa		11.23	□□□□□ -0.61
CACNA1A-222	ENST00000636022	TMEM131L	A2VDJ0	1609 aa		11.22	□□□□□ -0.61
CACNA1A-222	ENST00000636022	ZFYVE9	O95405	1425 aa		11.22	□□□□□ -0.61
CACNA1A-222	ENST00000636022	ITGAE	P38570	1179 aa		11.22	□□□□□ -0.61
CACNA1A-222	ENST00000636022	SCAF1	Q9H7N4	1312 aa	Known RBP	11.22	□□□□□ -0.61
CACNA1A-222	ENST00000636022	KCNA6	P17658	529 aa		11.21	□□□□□ -0.61
CACNA1A-222	ENST00000636022	SLC26A8	Q96RN1	970 aa		11.21	□□□□□ -0.61
CACNA1A-222	ENST00000636022	NUP155	O75694	1391 aa		11.2	□□□□□ -0.62
CACNA1A-222	ENST00000636022	RRBP1	Q9P2E9	1410 aa	Known RBP	11.19	□□□□□ -0.62
CACNA1A-222	ENST00000636022	RIMS2	Q9UQ26	1411 aa		11.18	□□□□□ -0.62
CACNA1A-222	ENST00000636022	PLEKHG1	Q9ULL1	1385 aa		11.18	□□□□□ -0.62
CACNA1A-222	ENST00000636022	NWD1	Q149M9	1564 aa		11.18	□□□□□ -0.62
CACNA1A-222	ENST00000636022	TMEM94	Q12767	1356 aa		11.17	□□□□□ -0.62
CACNA1A-222	ENST00000636022	CHD2	O14647	1828 aa	Known RBP	11.16	□□□□□ -0.62
CACNA1A-222	ENST00000636022	HDGF	P51858	240 aa	Known RBP	11.16	□□□□□ -0.62
CACNA1A-222	ENST00000636022	MED1	Q15648	1581 aa	Predicted RBP	11.16	□□□□□ -0.62
CACNA1A-222	ENST00000636022	NKTR	P30414	1462 aa	Known RBP	11.15	□□□□□ -0.62
CACNA1A-222	ENST00000636022	SOCS7	O14512	581 aa		11.15	□□□□□ -0.62
CACNA1A-222	ENST00000636022	TBX22	Q9Y458	520 aa		11.15	□□□□□ -0.62
CACNA1A-222	ENST00000636022	NAIP	Q13075	1403 aa		11.15	□□□□□ -0.62
CACNA1A-222	ENST00000636022	PPP1R15A	O75807	674 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNA1A-222	ENST00000636022	CHGA	P10645	457 aa	Known RBP	11.14	□□□□□ -0.63
CACNA1A-222	ENST00000636022	PROSER2	Q86WR7	435 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNA1A-222	ENST00000636022	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
CACNA1A-222	ENST00000636022	RBM33	Q96EV2	1170 aa	Known RBP	11.14	□□□□□ -0.63
CACNA1A-222	ENST00000636022	BCAN	Q96GW7	911 aa		11.14	□□□□□ -0.63
CACNA1A-222	ENST00000636022	FAM135B	Q49AJ0	1406 aa		11.14	□□□□□ -0.63
CACNA1A-222	ENST00000636022	ADAMTS13	Q76LX8	1427 aa		11.14	□□□□□ -0.63
CACNA1A-222	ENST00000636022	SPHKAP	Q2M3C7	1700 aa		11.13	□□□□□ -0.63
CACNA1A-222	ENST00000636022	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.12	□□□□□ -0.63
CACNA1A-222	ENST00000636022	DIP2A	Q14689	1571 aa		11.11	□□□□□ -0.63
CACNA1A-222	ENST00000636022	HFM1	A2PYH4	1435 aa		11.1	□□□□□ -0.63
CACNA1A-222	ENST00000636022	PIK3R4	Q99570	1358 aa		11.1	□□□□□ -0.63
CACNA1A-222	ENST00000636022	ROBO1	Q9Y6N7	1651 aa		11.1	□□□□□ -0.63
CACNA1A-222	ENST00000636022	NCOA3	Q9Y6Q9	1424 aa		11.09	□□□□□ -0.63
CACNA1A-222	ENST00000636022	NRXN3	Q9Y4C0	1643 aa		11.09	□□□□□ -0.63
CACNA1A-222	ENST00000636022	CLTCL1	P53675	1640 aa		11.09	□□□□□ -0.63
CACNA1A-222	ENST00000636022	TRPM2	O94759	1503 aa		11.09	□□□□□ -0.63
CACNA1A-222	ENST00000636022	MSH6	P52701	1360 aa		11.08	□□□□□ -0.64
CACNA1A-222	ENST00000636022	SLAIN2	Q9P270	581 aa		11.08	□□□□□ -0.64
CACNA1A-222	ENST00000636022	PTPRU	Q92729	1446 aa		11.08	□□□□□ -0.64
CACNA1A-222	ENST00000636022	SETBP1	Q9Y6X0	1596 aa		11.07	□□□□□ -0.64
CACNA1A-222	ENST00000636022	NEXMIF	Q5QGS0	1516 aa		11.06	□□□□□ -0.64
CACNA1A-222	ENST00000636022	KIF1B	O60333	1816 aa		11.05	□□□□□ -0.64
CACNA1A-222	ENST00000636022	ZNF326	Q5BKZ1	582 aa	Known RBP	11.05	□□□□□ -0.64
CACNA1A-222	ENST00000636022	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.05	□□□□□ -0.64
CACNA1A-222	ENST00000636022	AMOTL2	Q9Y2J4	779 aa		11.05	□□□□□ -0.64
CACNA1A-222	ENST00000636022	XRN1	Q8IZH2	1706 aa	Known RBP	11.04	□□□□□ -0.64
CACNA1A-222	ENST00000636022	TRIM52	Q96A61	297 aa		11.04	□□□□□ -0.64
CACNA1A-222	ENST00000636022	C19orf44	Q9H6X5	657 aa		11.04	□□□□□ -0.64
CACNA1A-222	ENST00000636022	MET	P08581	1390 aa		11.03	□□□□□ -0.64
CACNA1A-222	ENST00000636022	RGS17	Q9UGC6	210 aa	Predicted RBP	11.03	□□□□□ -0.64
CACNA1A-222	ENST00000636022	PHLPP1	O60346	1717 aa		11.02	□□□□□ -0.65
CACNA1A-222	ENST00000636022	CADPS2	Q86UW7	1296 aa		11.02	□□□□□ -0.65
CACNA1A-222	ENST00000636022	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.02	□□□□□ -0.65
CACNA1A-222	ENST00000636022	C14orf37	Q86TY3	774 aa		11.01	□□□□□ -0.65
CACNA1A-222	ENST00000636022	COL16A1	Q07092	1604 aa	Predicted RBP	11	□□□□□ -0.65
CACNA1A-222	ENST00000636022	ATF3	P18847	181 aa		11	□□□□□ -0.65
CACNA1A-222	ENST00000636022	SETD1A	O15047	1707 aa	Known RBP	11	□□□□□ -0.65
CACNA1A-222	ENST00000636022	DCC	P43146	1447 aa		11	□□□□□ -0.65
CACNA1A-222	ENST00000636022	RPGRIP1L	Q68CZ1	1315 aa		10.99	□□□□□ -0.65
CACNA1A-222	ENST00000636022	JCAD	Q9P266	1359 aa		10.99	□□□□□ -0.65
CACNA1A-222	ENST00000636022	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.98	□□□□□ -0.65
CACNA1A-222	ENST00000636022	PPL	O60437	1756 aa		10.98	□□□□□ -0.65
CACNA1A-222	ENST00000636022	VGF	O15240	615 aa	Predicted RBP	10.98	□□□□□ -0.65
CACNA1A-222	ENST00000636022	BRINP3	Q76B58	766 aa		10.98	□□□□□ -0.65
CACNA1A-222	ENST00000636022	MPHOSPH9	Q99550	1183 aa		10.97	□□□□□ -0.65
CACNA1A-222	ENST00000636022	MST1R	Q04912	1400 aa		10.97	□□□□□ -0.65
CACNA1A-222	ENST00000636022	PRAG1	Q86YV5	1406 aa		10.96	□□□□□ -0.65
CACNA1A-222	ENST00000636022	ADGRL3	Q9HAR2	1447 aa		10.96	□□□□□ -0.65
CACNA1A-222	ENST00000636022	NALCN	Q8IZF0	1738 aa		10.95	□□□□□ -0.66
CACNA1A-222	ENST00000636022	PTCH1	Q13635	1447 aa		10.95	□□□□□ -0.66
CACNA1A-222	ENST00000636022	SPATA31E1	Q6ZUB1	1445 aa		10.95	□□□□□ -0.66
CACNA1A-222	ENST00000636022	POTEA	Q6S8J7	498 aa		10.95	□□□□□ -0.66
CACNA1A-222	ENST00000636022	ASXL1	Q8IXJ9	1541 aa		10.94	□□□□□ -0.66
CACNA1A-222	ENST00000636022	CCDC144A	A2RUR9	1427 aa		10.94	□□□□□ -0.66
CACNA1A-222	ENST00000636022	ROBO2	Q9HCK4	1378 aa		10.94	□□□□□ -0.66
CACNA1A-222	ENST00000636022	SHPRH	Q149N8	1683 aa		10.94	□□□□□ -0.66
CACNA1A-222	ENST00000636022	LRP6	O75581	1613 aa		10.94	□□□□□ -0.66
CACNA1A-222	ENST00000636022	SPATA31A6	Q5VVP1	1343 aa		10.93	□□□□□ -0.66
CACNA1A-222	ENST00000636022	NHSL1	Q5SYE7	1610 aa		10.93	□□□□□ -0.66
CACNA1A-222	ENST00000636022	SETD5	Q9C0A6	1442 aa		10.92	□□□□□ -0.66
CACNA1A-222	ENST00000636022	IFT172	Q9UG01	1749 aa		10.92	□□□□□ -0.66
CACNA1A-222	ENST00000636022	ADGRF5	Q8IZF2	1346 aa		10.92	□□□□□ -0.66
CACNA1A-222	ENST00000636022	ACIN1	Q9UKV3	1341 aa	Known RBP	10.91	□□□□□ -0.66
CACNA1A-222	ENST00000636022	C1orf167	Q5SNV9	1468 aa		10.91	□□□□□ -0.66
CACNA1A-222	ENST00000636022	ANKRD30B	Q9BXX2	1392 aa		10.9	□□□□□ -0.66
CACNA1A-222	ENST00000636022	RGL3	Q3MIN7	710 aa		10.9	□□□□□ -0.66
CACNA1A-222	ENST00000636022	LAMC1	P11047	1609 aa		10.9	□□□□□ -0.66
CACNA1A-222	ENST00000636022	DDX17	Q92841	729 aa	Known RBP	10.89	□□□□□ -0.67
CACNA1A-222	ENST00000636022	TECPR2	O15040	1411 aa		10.88	□□□□□ -0.67
CACNA1A-222	ENST00000636022	PIK3C2G	O75747	1445 aa		10.88	□□□□□ -0.67
CACNA1A-222	ENST00000636022	LRRC59	Q96AG4	307 aa	Known RBP	10.88	□□□□□ -0.67
CACNA1A-222	ENST00000636022	RAB3GAP2	Q9H2M9	1393 aa		10.88	□□□□□ -0.67
CACNA1A-222	ENST00000636022	ORAI2	Q96SN7	254 aa		10.87	□□□□□ -0.67
CACNA1A-222	ENST00000636022	LRPPRC	P42704	1394 aa	Known RBP	10.87	□□□□□ -0.67
CACNA1A-222	ENST00000636022	ABCC11	Q96J66	1382 aa		10.87	□□□□□ -0.67
CACNA1A-222	ENST00000636022	NRXN1	Q9ULB1	1477 aa		10.87	□□□□□ -0.67
CACNA1A-222	ENST00000636022	CDC42BPG	Q6DT37	1551 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms