RNA–Protein interactions for RNA: ENST00000635904.1

CACNB4-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 2,444 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-217ENST00000635904 ZFYVE9O95405 1425 aa11.68□□□□□ -0.54
CACNB4-217ENST00000635904 ZNF326Q5BKZ1 582 aaKnown RBP11.68□□□□□ -0.54
CACNB4-217ENST00000635904 RPGRIP1LQ68CZ1 1315 aa11.68□□□□□ -0.54
CACNB4-217ENST00000635904 PRAG1Q86YV5 1406 aa11.68□□□□□ -0.54
CACNB4-217ENST00000635904 NRXN1Q9ULB1 1477 aa11.68□□□□□ -0.54
CACNB4-217ENST00000635904 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
CACNB4-217ENST00000635904 STAG3Q9UJ98 1225 aa11.67□□□□□ -0.54
CACNB4-217ENST00000635904 KDM2AQ9Y2K7 1162 aa11.67□□□□□ -0.54
CACNB4-217ENST00000635904 SLIT1O75093 1534 aa11.66□□□□□ -0.54
CACNB4-217ENST00000635904 ARHGAP23Q9P227 1491 aa11.66□□□□□ -0.54
CACNB4-217ENST00000635904 TMEM2Q9UHN6 1383 aa11.66□□□□□ -0.54
CACNB4-217ENST00000635904 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
CACNB4-217ENST00000635904 RIMS2Q9UQ26 1411 aa11.65□□□□□ -0.54
CACNB4-217ENST00000635904 ADGRF5Q8IZF2 1346 aa11.65□□□□□ -0.54
CACNB4-217ENST00000635904 PIK3C2GO75747 1445 aa11.65□□□□□ -0.54
CACNB4-217ENST00000635904 STAC3Q96MF2 364 aa11.65□□□□□ -0.55
CACNB4-217ENST00000635904 NUTM2DQ5VT03 806 aaPredicted RBP11.64□□□□□ -0.55
CACNB4-217ENST00000635904 TRPM1Q7Z4N2 1603 aa11.64□□□□□ -0.55
CACNB4-217ENST00000635904 RALGAPBQ86X10 1494 aa11.63□□□□□ -0.55
CACNB4-217ENST00000635904 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
CACNB4-217ENST00000635904 LMTK3Q96Q04 1460 aa11.62□□□□□ -0.55
CACNB4-217ENST00000635904 NRXN3Q9Y4C0 1643 aa11.62□□□□□ -0.55
CACNB4-217ENST00000635904 KIAA1210Q9ULL0 1709 aa11.62□□□□□ -0.55
CACNB4-217ENST00000635904 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
CACNB4-217ENST00000635904 LTKP29376 864 aa11.61□□□□□ -0.55
CACNB4-217ENST00000635904 SCAF11Q99590 1463 aaKnown RBP11.6□□□□□ -0.55
CACNB4-217ENST00000635904 SETBP1Q9Y6X0 1596 aa11.6□□□□□ -0.55
CACNB4-217ENST00000635904 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.59□□□□□ -0.55
CACNB4-217ENST00000635904 SETD1AO15047 1707 aaKnown RBP11.59□□□□□ -0.55
CACNB4-217ENST00000635904 IQGAP1P46940 1657 aa11.59□□□□□ -0.55
CACNB4-217ENST00000635904 GPRASP1Q5JY77 1395 aa11.59□□□□□ -0.55
CACNB4-217ENST00000635904 LAMC1P11047 1609 aa11.59□□□□□ -0.55
CACNB4-217ENST00000635904 NBPF1Q3BBV0 1214 aa11.58□□□□□ -0.56
CACNB4-217ENST00000635904 TXNDC2Q86VQ3 553 aa11.58□□□□□ -0.56
CACNB4-217ENST00000635904 ADGRB1O14514 1584 aa11.58□□□□□ -0.56
CACNB4-217ENST00000635904 PLEKHG1Q9ULL1 1385 aa11.58□□□□□ -0.56
CACNB4-217ENST00000635904 CFAP70Q5T0N1 1121 aa11.58□□□□□ -0.56
CACNB4-217ENST00000635904 POLR1AO95602 1720 aaPredicted RBP11.58□□□□□ -0.56
CACNB4-217ENST00000635904 ASXL1Q8IXJ9 1541 aa11.57□□□□□ -0.56
CACNB4-217ENST00000635904 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
CACNB4-217ENST00000635904 C14orf93Q9H972 538 aaKnown RBP11.57□□□□□ -0.56
CACNB4-217ENST00000635904 ALKQ9UM73 1620 aa11.57□□□□□ -0.56
CACNB4-217ENST00000635904 ROCK2O75116 1388 aaKnown RBP11.57□□□□□ -0.56
CACNB4-217ENST00000635904 ADAMTS13Q76LX8 1427 aa11.57□□□□□ -0.56
CACNB4-217ENST00000635904 EID1Q9Y6B2 187 aa11.57□□□□□ -0.56
CACNB4-217ENST00000635904 MED14O60244 1454 aa11.55□□□□□ -0.56
CACNB4-217ENST00000635904 HSPA2P54652 639 aa11.55□□□□□ -0.56
CACNB4-217ENST00000635904 ANKLE2Q86XL3 938 aa11.55□□□□□ -0.56
CACNB4-217ENST00000635904 STRCQ7RTU9 1775 aa11.53□□□□□ -0.56
CACNB4-217ENST00000635904 CARD11Q9BXL7 1154 aa11.53□□□□□ -0.56
CACNB4-217ENST00000635904 DIP2AQ14689 1571 aa11.52□□□□□ -0.57
CACNB4-217ENST00000635904 METP08581 1390 aa11.52□□□□□ -0.57
CACNB4-217ENST00000635904 USP47Q96K76 1375 aa11.52□□□□□ -0.57
CACNB4-217ENST00000635904 TMEM132EQ6IEE7 984 aa11.52□□□□□ -0.57
CACNB4-217ENST00000635904 NPHP4O75161 1426 aaPredicted RBP11.52□□□□□ -0.57
CACNB4-217ENST00000635904 NCKAP5LQ9HCH0 1330 aa11.52□□□□□ -0.57
CACNB4-217ENST00000635904 SLC26A8Q96RN1 970 aa11.51□□□□□ -0.57
CACNB4-217ENST00000635904 YTHDC2Q9H6S0 1430 aaKnown RBP11.5□□□□□ -0.57
CACNB4-217ENST00000635904 ARHGEF28Q8N1W1 1705 aaKnown RBP11.5□□□□□ -0.57
CACNB4-217ENST00000635904 BCANQ96GW7 911 aa11.49□□□□□ -0.57
CACNB4-217ENST00000635904 TBX22Q9Y458 520 aa11.49□□□□□ -0.57
CACNB4-217ENST00000635904 EIF4G2P78344 907 aaKnown RBP eCLIP11.49□□□□□ -0.57
CACNB4-217ENST00000635904 HSPA5P11021 654 aaKnown RBP11.48□□□□□ -0.57
CACNB4-217ENST00000635904 KNDC1Q76NI1 1749 aa11.48□□□□□ -0.57
CACNB4-217ENST00000635904 TECPR2O15040 1411 aa11.48□□□□□ -0.57
CACNB4-217ENST00000635904 PTPRUQ92729 1446 aa11.48□□□□□ -0.57
CACNB4-217ENST00000635904 HIRIP3Q9BW71 556 aaPredicted RBP11.48□□□□□ -0.57
CACNB4-217ENST00000635904 LRPPRCP42704 1394 aaKnown RBP11.48□□□□□ -0.57
CACNB4-217ENST00000635904 XRN1Q8IZH2 1706 aaKnown RBP11.47□□□□□ -0.57
CACNB4-217ENST00000635904 ABCC11Q96J66 1382 aa11.47□□□□□ -0.57
CACNB4-217ENST00000635904 PIK3R4Q99570 1358 aa11.46□□□□□ -0.57
CACNB4-217ENST00000635904 ST20-MTHFSA0A0A6YYL1 179 aa11.46□□□□□ -0.57
CACNB4-217ENST00000635904 TRAK1Q9UPV9 953 aa11.46□□□□□ -0.57
CACNB4-217ENST00000635904 CHD2O14647 1828 aaKnown RBP11.46□□□□□ -0.57
CACNB4-217ENST00000635904 CPS1P31327 1500 aa11.46□□□□□ -0.57
CACNB4-217ENST00000635904 DLC1Q96QB1 1528 aa11.46□□□□□ -0.57
CACNB4-217ENST00000635904 EIF3AQ14152 1382 aaKnown RBP11.45□□□□□ -0.58
CACNB4-217ENST00000635904 TESK2Q96S53 571 aa11.45□□□□□ -0.58
CACNB4-217ENST00000635904 STK26Q9P289 416 aa11.45□□□□□ -0.58
CACNB4-217ENST00000635904 QRICH2Q9H0J4 1663 aa11.44□□□□□ -0.58
CACNB4-217ENST00000635904 NWD1Q149M9 1564 aa11.44□□□□□ -0.58
CACNB4-217ENST00000635904 ROBO2Q9HCK4 1378 aa11.43□□□□□ -0.58
CACNB4-217ENST00000635904 PTCH1Q13635 1447 aa11.43□□□□□ -0.58
CACNB4-217ENST00000635904 SBNO2Q9Y2G9 1366 aa11.43□□□□□ -0.58
CACNB4-217ENST00000635904 CENPJQ9HC77 1338 aaPredicted RBP11.42□□□□□ -0.58
CACNB4-217ENST00000635904 PLEKHH1Q9ULM0 1364 aa11.42□□□□□ -0.58
CACNB4-217ENST00000635904 FAM135BQ49AJ0 1406 aa11.42□□□□□ -0.58
CACNB4-217ENST00000635904 AMOTL2Q9Y2J4 779 aa11.42□□□□□ -0.58
CACNB4-217ENST00000635904 STRCP1A6NGW2 1772 aa11.42□□□□□ -0.58
CACNB4-217ENST00000635904 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
CACNB4-217ENST00000635904 KCNA6P17658 529 aa11.41□□□□□ -0.58
CACNB4-217ENST00000635904 PRAM1Q96QH2 718 aa11.41□□□□□ -0.58
CACNB4-217ENST00000635904 C11orf95C9JLR9 678 aaPredicted RBP11.4□□□□□ -0.58
CACNB4-217ENST00000635904 SIRT1Q96EB6 747 aa11.4□□□□□ -0.58
CACNB4-217ENST00000635904 WAPLQ7Z5K2 1190 aa11.4□□□□□ -0.58
CACNB4-217ENST00000635904 DISP3Q9P2K9 1392 aa11.39□□□□□ -0.59
CACNB4-217ENST00000635904 SAFB2Q14151 953 aaKnown RBP eCLIP11.39□□□□□ -0.59
CACNB4-217ENST00000635904 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.39□□□□□ -0.59
CACNB4-217ENST00000635904 NKTRP30414 1462 aaKnown RBP11.38□□□□□ -0.59
CACNB4-217ENST00000635904 TULP4Q9NRJ4 1543 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms