RNA–Protein interactions for RNA: ENST00000635722.1

CHRNA7-204, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-204ENST00000635722 RPRD2Q5VT52 1461 aaKnown RBP32.44■■■□□ 2.78
CHRNA7-204ENST00000635722 KCNA6P17658 529 aa32.44■■■□□ 2.78
CHRNA7-204ENST00000635722 FAM135BQ49AJ0 1406 aa32.43■■■□□ 2.78
CHRNA7-204ENST00000635722 NKTRP30414 1462 aaKnown RBP32.43■■■□□ 2.78
CHRNA7-204ENST00000635722 TMEM131LA2VDJ0 1609 aa32.43■■■□□ 2.78
CHRNA7-204ENST00000635722 RGS17Q9UGC6 210 aaPredicted RBP32.42■■■□□ 2.78
CHRNA7-204ENST00000635722 PROSER2Q86WR7 435 aaPredicted RBP32.4■■■□□ 2.78
CHRNA7-204ENST00000635722 E9PCH4 1651 aa32.39■■■□□ 2.78
CHRNA7-204ENST00000635722 SLC52A1Q9NWF4 448 aa32.38■■■□□ 2.77
CHRNA7-204ENST00000635722 RIMS2Q9UQ26 1411 aa32.37■■■□□ 2.77
CHRNA7-204ENST00000635722 CHD2O14647 1828 aaKnown RBP32.36■■■□□ 2.77
CHRNA7-204ENST00000635722 BCANQ96GW7 911 aa32.35■■■□□ 2.77
CHRNA7-204ENST00000635722 PLEKHG1Q9ULL1 1385 aa32.33■■■□□ 2.77
CHRNA7-204ENST00000635722 IQGAP3Q86VI3 1631 aa32.3■■■□□ 2.76
CHRNA7-204ENST00000635722 PHLPP1O60346 1717 aa32.29■■■□□ 2.76
CHRNA7-204ENST00000635722 MSH6P52701 1360 aa32.28■■■□□ 2.76
CHRNA7-204ENST00000635722 PPP1R15AO75807 674 aaPredicted RBP32.27■■■□□ 2.76
CHRNA7-204ENST00000635722 NUTM2DQ5VT03 806 aaPredicted RBP32.25■■■□□ 2.75
CHRNA7-204ENST00000635722 ADAMTS13Q76LX8 1427 aa32.24■■■□□ 2.75
CHRNA7-204ENST00000635722 CHGAP10645 457 aaKnown RBP32.23■■■□□ 2.75
CHRNA7-204ENST00000635722 POTEAQ6S8J7 498 aa32.21■■■□□ 2.75
CHRNA7-204ENST00000635722 COL16A1Q07092 1604 aaPredicted RBP32.2■■■□□ 2.75
CHRNA7-204ENST00000635722 ROCK1Q13464 1354 aa32.19■■■□□ 2.74
CHRNA7-204ENST00000635722 SLAIN2Q9P270 581 aa32.18■■■□□ 2.74
CHRNA7-204ENST00000635722 DIP2AQ14689 1571 aa32.18■■■□□ 2.74
CHRNA7-204ENST00000635722 SETD1AO15047 1707 aaKnown RBP32.17■■■□□ 2.74
CHRNA7-204ENST00000635722 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.16■■■□□ 2.74
CHRNA7-204ENST00000635722 ITGAEP38570 1179 aa32.13■■■□□ 2.73
CHRNA7-204ENST00000635722 TBX22Q9Y458 520 aa32.13■■■□□ 2.73
CHRNA7-204ENST00000635722 NUP155O75694 1391 aa32.11■■■□□ 2.73
CHRNA7-204ENST00000635722 NRXN3Q9Y4C0 1643 aa32.11■■■□□ 2.73
CHRNA7-204ENST00000635722 PTPRUQ92729 1446 aa32.1■■■□□ 2.73
CHRNA7-204ENST00000635722 PPARGC1BQ86YN6 1023 aaKnown RBP32.1■■■□□ 2.73
CHRNA7-204ENST00000635722 SPHKAPQ2M3C7 1700 aa32.09■■■□□ 2.73
CHRNA7-204ENST00000635722 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.09■■■□□ 2.73
CHRNA7-204ENST00000635722 TRPM2O94759 1503 aa32.09■■■□□ 2.73
CHRNA7-204ENST00000635722 JCADQ9P266 1359 aa32.08■■■□□ 2.73
CHRNA7-204ENST00000635722 LRP6O75581 1613 aa32.08■■■□□ 2.73
CHRNA7-204ENST00000635722 HDGFP51858 240 aaKnown RBP32.08■■■□□ 2.73
CHRNA7-204ENST00000635722 C14orf37Q86TY3 774 aa32.07■■■□□ 2.72
CHRNA7-204ENST00000635722 NCOA3Q9Y6Q9 1424 aa32.05■■■□□ 2.72
CHRNA7-204ENST00000635722 XRN1Q8IZH2 1706 aaKnown RBP32.05■■■□□ 2.72
CHRNA7-204ENST00000635722 AHDC1Q5TGY3 1603 aaPredicted RBP32.04■■■□□ 2.72
CHRNA7-204ENST00000635722 PIK3R4Q99570 1358 aa32.03■■■□□ 2.72
CHRNA7-204ENST00000635722 SETBP1Q9Y6X0 1596 aa32■■■□□ 2.71
CHRNA7-204ENST00000635722 SHPRHQ149N8 1683 aa31.99■■■□□ 2.71
CHRNA7-204ENST00000635722 CLTCL1P53675 1640 aa31.97■■■□□ 2.71
CHRNA7-204ENST00000635722 AMOTL2Q9Y2J4 779 aa31.97■■■□□ 2.71
CHRNA7-204ENST00000635722 C19orf44Q9H6X5 657 aa31.95■■■□□ 2.71
CHRNA7-204ENST00000635722 ATF3P18847 181 aa31.94■■■□□ 2.7
CHRNA7-204ENST00000635722 CADPS2Q86UW7 1296 aa31.94■■■□□ 2.7
CHRNA7-204ENST00000635722 ASXL1Q8IXJ9 1541 aa31.91■■■□□ 2.7
CHRNA7-204ENST00000635722 METP08581 1390 aa31.91■■■□□ 2.7
CHRNA7-204ENST00000635722 NEXMIFQ5QGS0 1516 aa31.9■■■□□ 2.7
CHRNA7-204ENST00000635722 BRINP3Q76B58 766 aa31.9■■■□□ 2.7
CHRNA7-204ENST00000635722 NALCNQ8IZF0 1738 aa31.89■■■□□ 2.69
CHRNA7-204ENST00000635722 NHSL1Q5SYE7 1610 aa31.87■■■□□ 2.69
CHRNA7-204ENST00000635722 DCCP43146 1447 aa31.87■■■□□ 2.69
CHRNA7-204ENST00000635722 SPATA31A6Q5VVP1 1343 aa31.87■■■□□ 2.69
CHRNA7-204ENST00000635722 MST1RQ04912 1400 aa31.86■■■□□ 2.69
CHRNA7-204ENST00000635722 ZNF326Q5BKZ1 582 aaKnown RBP31.86■■■□□ 2.69
CHRNA7-204ENST00000635722 MEX3CQ5U5Q3 659 aaKnown RBP31.84■■■□□ 2.69
CHRNA7-204ENST00000635722 KIF1BO60333 1816 aa31.8■■■□□ 2.68
CHRNA7-204ENST00000635722 NAIPQ13075 1403 aa31.79■■■□□ 2.68
CHRNA7-204ENST00000635722 ADGRL3Q9HAR2 1447 aa31.79■■■□□ 2.68
CHRNA7-204ENST00000635722 RRBP1Q9P2E9 1410 aaKnown RBP31.77■■■□□ 2.68
CHRNA7-204ENST00000635722 NUTM2BA6NNL0 878 aaPredicted RBP31.77■■■□□ 2.68
CHRNA7-204ENST00000635722 NUTM2EB1AL46 878 aaPredicted RBP31.77■■■□□ 2.68
CHRNA7-204ENST00000635722 NUTM2AQ8IVF1 878 aaPredicted RBP31.77■■■□□ 2.68
CHRNA7-204ENST00000635722 DDX17Q92841 729 aaKnown RBP31.76■■■□□ 2.67
CHRNA7-204ENST00000635722 TRIM52Q96A61 297 aa31.76■■■□□ 2.67
CHRNA7-204ENST00000635722 SETD5Q9C0A6 1442 aa31.74■■■□□ 2.67
CHRNA7-204ENST00000635722 ZNF772Q68DY9 489 aaPredicted RBP31.71■■■□□ 2.67
CHRNA7-204ENST00000635722 AFF2P51816 1311 aa31.66■■■□□ 2.66
CHRNA7-204ENST00000635722 PNPLA6Q8IY17 1366 aa31.66■■■□□ 2.66
CHRNA7-204ENST00000635722 ROBO2Q9HCK4 1378 aa31.65■■■□□ 2.66
CHRNA7-204ENST00000635722 PTCH1Q13635 1447 aa31.65■■■□□ 2.66
CHRNA7-204ENST00000635722 PPLO60437 1756 aa31.64■■■□□ 2.66
CHRNA7-204ENST00000635722 C1orf167Q5SNV9 1468 aa31.64■■■□□ 2.66
CHRNA7-204ENST00000635722 UPF1Q92900 1129 aaKnown RBP eCLIP31.62■■■□□ 2.65
CHRNA7-204ENST00000635722 LAMC1P11047 1609 aa31.61■■■□□ 2.65
CHRNA7-204ENST00000635722 HFM1A2PYH4 1435 aa31.6■■■□□ 2.65
CHRNA7-204ENST00000635722 RXRBP28702 533 aa31.59■■■□□ 2.65
CHRNA7-204ENST00000635722 LRRC59Q96AG4 307 aaKnown RBP31.57■■■□□ 2.64
CHRNA7-204ENST00000635722 C8orf37Q96NL8 207 aa31.57■■■□□ 2.64
CHRNA7-204ENST00000635722 CDK12Q9NYV4 1490 aaPredicted RBP31.57■■■□□ 2.64
CHRNA7-204ENST00000635722 RGS12O14924 1447 aa31.56■■■□□ 2.64
CHRNA7-204ENST00000635722 PRAG1Q86YV5 1406 aa31.55■■■□□ 2.64
CHRNA7-204ENST00000635722 ORAI2Q96SN7 254 aa31.53■■■□□ 2.64
CHRNA7-204ENST00000635722 FOXD1Q16676 465 aa31.51■■■□□ 2.63
CHRNA7-204ENST00000635722 VGFO15240 615 aaPredicted RBP31.5■■■□□ 2.63
CHRNA7-204ENST00000635722 SLC4A1APQ9BWU0 796 aaKnown RBP31.5■■■□□ 2.63
CHRNA7-204ENST00000635722 ADAMTS2O95450 1211 aa31.49■■■□□ 2.63
CHRNA7-204ENST00000635722 CDC42BPGQ6DT37 1551 aa31.46■■■□□ 2.63
CHRNA7-204ENST00000635722 SOS2Q07890 1332 aaPredicted RBP31.46■■■□□ 2.63
CHRNA7-204ENST00000635722 IFT172Q9UG01 1749 aa31.44■■■□□ 2.62
CHRNA7-204ENST00000635722 COL22A1Q8NFW1 1626 aaPredicted RBP31.43■■■□□ 2.62
CHRNA7-204ENST00000635722 QTRT2Q9H974 415 aaKnown RBP31.43■■■□□ 2.62
CHRNA7-204ENST00000635722 RPGRIP1LQ68CZ1 1315 aa31.43■■■□□ 2.62
CHRNA7-204ENST00000635722 ADGRF5Q8IZF2 1346 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms