RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 WNT2BQ93097 391 aa14.36□□□□□ -0.11
LINC01108-202ENST00000635227 TMUB1Q9BVT8 246 aa14.36□□□□□ -0.11
LINC01108-202ENST00000635227 GPCPD1Q9NPB8 672 aa14.35□□□□□ -0.11
LINC01108-202ENST00000635227 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
LINC01108-202ENST00000635227 CLCN1P35523 988 aa14.34□□□□□ -0.11
LINC01108-202ENST00000635227 ANKK1Q8NFD2 765 aa14.34□□□□□ -0.11
LINC01108-202ENST00000635227 MYT1LQ9UL68 1186 aa14.34□□□□□ -0.11
LINC01108-202ENST00000635227 HDGFP51858 240 aaKnown RBP14.33□□□□□ -0.12
LINC01108-202ENST00000635227 GPBP1L1Q9HC44 474 aaPredicted RBP14.33□□□□□ -0.12
LINC01108-202ENST00000635227 BCAMP50895 628 aa14.32□□□□□ -0.12
LINC01108-202ENST00000635227 BRPF1P55201 1214 aaPredicted RBP14.32□□□□□ -0.12
LINC01108-202ENST00000635227 GIGYF2Q6Y7W6 1299 aaKnown RBP14.32□□□□□ -0.12
LINC01108-202ENST00000635227 KCTD12Q96CX2 325 aaKnown RBP14.32□□□□□ -0.12
LINC01108-202ENST00000635227 LRCH3Q96II8 777 aa14.31□□□□□ -0.12
LINC01108-202ENST00000635227 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.31□□□□□ -0.12
LINC01108-202ENST00000635227 SOWAHBA6NEL2 793 aa14.3□□□□□ -0.12
LINC01108-202ENST00000635227 NEUROD2Q15784 382 aa14.3□□□□□ -0.12
LINC01108-202ENST00000635227 RNF40O75150 1001 aa14.29□□□□□ -0.12
LINC01108-202ENST00000635227 FAM217BQ9NTX9 383 aaPredicted RBP14.28□□□□□ -0.12
LINC01108-202ENST00000635227 DDX11L8A8MPP1 907 aa14.27□□□□□ -0.13
LINC01108-202ENST00000635227 THSD4Q6ZMP0 1018 aa14.27□□□□□ -0.13
LINC01108-202ENST00000635227 KDM4CQ9H3R0 1056 aa14.27□□□□□ -0.13
LINC01108-202ENST00000635227 SSTR3P32745 418 aaPredicted RBP14.26□□□□□ -0.13
LINC01108-202ENST00000635227 SLF2Q8IX21 1173 aa14.26□□□□□ -0.13
LINC01108-202ENST00000635227 SLC10A3P09131 477 aa14.25□□□□□ -0.13
LINC01108-202ENST00000635227 MS4A1P11836 297 aa14.25□□□□□ -0.13
LINC01108-202ENST00000635227 HPS5Q9UPZ3 1129 aa14.24□□□□□ -0.13
LINC01108-202ENST00000635227 SULF1Q8IWU6 871 aa14.23□□□□□ -0.13
LINC01108-202ENST00000635227 RNF166Q96A37 237 aaPredicted RBP14.23□□□□□ -0.13
LINC01108-202ENST00000635227 SLC4A3P48751 1232 aa14.22□□□□□ -0.13
LINC01108-202ENST00000635227 MMRN1Q13201 1228 aa14.22□□□□□ -0.13
LINC01108-202ENST00000635227 RDH13Q8NBN7 331 aa14.22□□□□□ -0.13
LINC01108-202ENST00000635227 TSR3Q9UJK0 312 aaKnown RBP14.21□□□□□ -0.13
LINC01108-202ENST00000635227 CD46P15529 392 aa14.2□□□□□ -0.14
LINC01108-202ENST00000635227 WBP1LQ9NX94 342 aa14.2□□□□□ -0.14
LINC01108-202ENST00000635227 PTPN5P54829 565 aa14.19□□□□□ -0.14
LINC01108-202ENST00000635227 PPP4CP60510 307 aa14.19□□□□□ -0.14
LINC01108-202ENST00000635227 RSPH4AQ5TD94 716 aa14.16□□□□□ -0.14
LINC01108-202ENST00000635227 BEGAINQ9BUH8 593 aa14.16□□□□□ -0.14
LINC01108-202ENST00000635227 FAM117AQ9C073 453 aa14.16□□□□□ -0.14
LINC01108-202ENST00000635227 CFHP08603 1231 aa14.15□□□□□ -0.14
LINC01108-202ENST00000635227 GCGRP47871 477 aa14.13□□□□□ -0.15
LINC01108-202ENST00000635227 APLP1P51693 650 aa14.13□□□□□ -0.15
LINC01108-202ENST00000635227 NECTIN2Q92692 538 aa14.12□□□□□ -0.15
LINC01108-202ENST00000635227 PLEKHG3A1L390 1219 aa14.09□□□□□ -0.15
LINC01108-202ENST00000635227 IL27Q8NEV9 243 aa14.09□□□□□ -0.15
LINC01108-202ENST00000635227 KMT5BQ4FZB7 885 aa14.08□□□□□ -0.16
LINC01108-202ENST00000635227 DDRGK1Q96HY6 314 aa14.07□□□□□ -0.16
LINC01108-202ENST00000635227 HCSTQ9UBK5 93 aa14.07□□□□□ -0.16
LINC01108-202ENST00000635227 KDM4AO75164 1064 aa14.06□□□□□ -0.16
LINC01108-202ENST00000635227 SPIRE2Q8WWL2 714 aa14.06□□□□□ -0.16
LINC01108-202ENST00000635227 ACTN4O43707 911 aaKnown RBP14.05□□□□□ -0.16
LINC01108-202ENST00000635227 FUT2Q10981 343 aa14.05□□□□□ -0.16
LINC01108-202ENST00000635227 NYAP1Q6ZVC0 841 aa14.04□□□□□ -0.16
LINC01108-202ENST00000635227 NUTM1Q86Y26 1132 aa14.04□□□□□ -0.16
LINC01108-202ENST00000635227 PRR14Q9BWN1 585 aa14.04□□□□□ -0.16
LINC01108-202ENST00000635227 TBC1D2Q9BYX2 928 aa14.03□□□□□ -0.16
LINC01108-202ENST00000635227 PUS10Q3MIT2 529 aaKnown RBP14.01□□□□□ -0.17
LINC01108-202ENST00000635227 HLA-CQ95604 372 aa14□□□□□ -0.17
LINC01108-202ENST00000635227 HOXA2O43364 376 aa13.99□□□□□ -0.17
LINC01108-202ENST00000635227 PCDHB3Q9Y5E6 796 aa13.99□□□□□ -0.17
LINC01108-202ENST00000635227 ATP6V1AP38606 617 aa13.98□□□□□ -0.17
LINC01108-202ENST00000635227 USP46P62068 366 aa13.98□□□□□ -0.17
LINC01108-202ENST00000635227 MOXD2PA6NHM9 499 aa13.97□□□□□ -0.17
LINC01108-202ENST00000635227 NDUFV2P19404 249 aa13.97□□□□□ -0.17
LINC01108-202ENST00000635227 MYSM1Q5VVJ2 828 aa13.97□□□□□ -0.17
LINC01108-202ENST00000635227 BLOC1S3Q6QNY0 202 aa13.97□□□□□ -0.17
LINC01108-202ENST00000635227 GUCA2AQ02747 115 aa13.96□□□□□ -0.17
LINC01108-202ENST00000635227 DIXDC1Q155Q3 683 aa13.96□□□□□ -0.17
LINC01108-202ENST00000635227 PLSCR2Q9NRY7 297 aa13.96□□□□□ -0.17
LINC01108-202ENST00000635227 COPS2P61201 443 aa13.95□□□□□ -0.18
LINC01108-202ENST00000635227 MORN1Q5T089 497 aa13.95□□□□□ -0.18
LINC01108-202ENST00000635227 MTRQ99707 1265 aa13.94□□□□□ -0.18
LINC01108-202ENST00000635227 RSPH6AQ9H0K4 717 aa13.94□□□□□ -0.18
LINC01108-202ENST00000635227 GRIPAP1Q4V328 841 aa13.93□□□□□ -0.18
LINC01108-202ENST00000635227 POLR3EQ9NVU0 708 aa13.93□□□□□ -0.18
LINC01108-202ENST00000635227 SH3D19Q5HYK7 790 aa13.92□□□□□ -0.18
LINC01108-202ENST00000635227 TJAP1Q5JTD0 557 aa13.92□□□□□ -0.18
LINC01108-202ENST00000635227 RSBN1LQ6PCB5 846 aaPredicted RBP13.92□□□□□ -0.18
LINC01108-202ENST00000635227 SLC27A5Q9Y2P5 690 aa13.92□□□□□ -0.18
LINC01108-202ENST00000635227 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
LINC01108-202ENST00000635227 LIMD1Q9UGP4 676 aa13.91□□□□□ -0.18
LINC01108-202ENST00000635227 SCUBE3Q8IX30 993 aa13.9□□□□□ -0.18
LINC01108-202ENST00000635227 PCDHGC3Q9UN70 934 aa13.9□□□□□ -0.18
LINC01108-202ENST00000635227 SPTLC1O15269 473 aa13.89□□□□□ -0.19
LINC01108-202ENST00000635227 FDX1P10109 184 aa13.89□□□□□ -0.19
LINC01108-202ENST00000635227 SKIV2LQ15477 1246 aaKnown RBP13.89□□□□□ -0.19
LINC01108-202ENST00000635227 ZNF516Q92618 1163 aa13.89□□□□□ -0.19
LINC01108-202ENST00000635227 CLK2P49760 499 aaKnown RBP13.88□□□□□ -0.19
LINC01108-202ENST00000635227 PCDHB15Q9Y5E8 787 aa13.88□□□□□ -0.19
LINC01108-202ENST00000635227 NR1I2O75469 434 aa13.87□□□□□ -0.19
LINC01108-202ENST00000635227 PROCA1Q8NCQ7 364 aaPredicted RBP13.87□□□□□ -0.19
LINC01108-202ENST00000635227 IL21Q9HBE4 155 aa13.87□□□□□ -0.19
LINC01108-202ENST00000635227 GOPCQ9HD26 462 aa13.86□□□□□ -0.19
LINC01108-202ENST00000635227 ZPR1O75312 459 aa13.85□□□□□ -0.19
LINC01108-202ENST00000635227 GJA5P36382 358 aa13.85□□□□□ -0.19
LINC01108-202ENST00000635227 CSPP1Q1MSJ5 1256 aa13.85□□□□□ -0.19
LINC01108-202ENST00000635227 TMEM132AQ24JP5 1023 aa13.85□□□□□ -0.19
LINC01108-202ENST00000635227 ITGBL1O95965 494 aaPredicted RBP13.84□□□□□ -0.19
LINC01108-202ENST00000635227 RNF19BQ6ZMZ0 732 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms