RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 SYNE3Q6ZMZ3 975 aa11.12□□□□□ -0.63
CSMD1-218ENST00000635120 EID1Q9Y6B2 187 aa11.12□□□□□ -0.63
CSMD1-218ENST00000635120 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.12□□□□□ -0.63
CSMD1-218ENST00000635120 CHMP4CQ96CF2 233 aa11.12□□□□□ -0.63
CSMD1-218ENST00000635120 FOSBP53539 338 aa11.12□□□□□ -0.63
CSMD1-218ENST00000635120 E9PSI1 815 aa11.11□□□□□ -0.63
CSMD1-218ENST00000635120 TRIM29Q14134 588 aa11.11□□□□□ -0.63
CSMD1-218ENST00000635120 ELL2O00472 640 aaPredicted RBP11.11□□□□□ -0.63
CSMD1-218ENST00000635120 BICD2Q8TD16 824 aa11.11□□□□□ -0.63
CSMD1-218ENST00000635120 RUFY2Q8WXA3 655 aa11.11□□□□□ -0.63
CSMD1-218ENST00000635120 C9orf78Q9NZ63 289 aaPredicted RBP11.11□□□□□ -0.63
CSMD1-218ENST00000635120 KIF3BO15066 747 aa11.11□□□□□ -0.63
CSMD1-218ENST00000635120 RAD21O60216 631 aa11.11□□□□□ -0.63
CSMD1-218ENST00000635120 HOOK1Q9UJC3 728 aaKnown RBP11.11□□□□□ -0.63
CSMD1-218ENST00000635120 COG6Q9Y2V7 657 aa11.11□□□□□ -0.63
CSMD1-218ENST00000635120 CPLX1O14810 134 aa11.11□□□□□ -0.63
CSMD1-218ENST00000635120 LRRFIP1Q32MZ4 808 aaKnown RBP11.11□□□□□ -0.63
CSMD1-218ENST00000635120 UACAQ9BZF9 1416 aa11.11□□□□□ -0.63
CSMD1-218ENST00000635120 APPP05067 770 aa11.1□□□□□ -0.63
CSMD1-218ENST00000635120 C1orf141Q5JVX7 400 aa11.1□□□□□ -0.63
CSMD1-218ENST00000635120 TRAK1Q9UPV9 953 aa11.1□□□□□ -0.63
CSMD1-218ENST00000635120 WASHC2CQ9Y4E1 1318 aa11.1□□□□□ -0.63
CSMD1-218ENST00000635120 ZKSCAN1P17029 563 aaPredicted RBP11.1□□□□□ -0.63
CSMD1-218ENST00000635120 EFCAB2Q5VUJ9 269 aa11.1□□□□□ -0.63
CSMD1-218ENST00000635120 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
CSMD1-218ENST00000635120 ST20-MTHFSA0A0A6YYL1 179 aa11.09□□□□□ -0.63
CSMD1-218ENST00000635120 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
CSMD1-218ENST00000635120 VPS37CA5D8V6 355 aaPredicted RBP11.09□□□□□ -0.63
CSMD1-218ENST00000635120 HNRNPMP52272 730 aaKnown RBP eCLIP11.09□□□□□ -0.63
CSMD1-218ENST00000635120 NOL10Q9BSC4 688 aaKnown RBP11.09□□□□□ -0.63
CSMD1-218ENST00000635120 ROCK1Q13464 1354 aa11.09□□□□□ -0.63
CSMD1-218ENST00000635120 IFT57Q9NWB7 429 aa11.09□□□□□ -0.63
CSMD1-218ENST00000635120 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
CSMD1-218ENST00000635120 MROH2BQ7Z745 1585 aa11.08□□□□□ -0.63
CSMD1-218ENST00000635120 RRP12Q5JTH9 1297 aaKnown RBP11.08□□□□□ -0.64
CSMD1-218ENST00000635120 NGEFQ8N5V2 710 aa11.08□□□□□ -0.64
CSMD1-218ENST00000635120 COG3Q96JB2 828 aa11.08□□□□□ -0.64
CSMD1-218ENST00000635120 RUFY1Q96T51 708 aa11.08□□□□□ -0.64
CSMD1-218ENST00000635120 CPLX2Q6PUV4 134 aaKnown RBP11.08□□□□□ -0.64
CSMD1-218ENST00000635120 NAP1L1P55209 391 aaKnown RBP11.08□□□□□ -0.64
CSMD1-218ENST00000635120 NEXNQ0ZGT2 675 aa11.08□□□□□ -0.64
CSMD1-218ENST00000635120 NECTIN2Q92692 538 aa11.08□□□□□ -0.64
CSMD1-218ENST00000635120 AK7Q96M32 723 aa11.08□□□□□ -0.64
CSMD1-218ENST00000635120 CALRP27797 417 aaKnown RBP11.08□□□□□ -0.64
CSMD1-218ENST00000635120 IFIT2P09913 472 aaKnown RBP11.08□□□□□ -0.64
CSMD1-218ENST00000635120 NFXL1Q6ZNB6 911 aa11.07□□□□□ -0.64
CSMD1-218ENST00000635120 AMOTL1Q8IY63 956 aa11.07□□□□□ -0.64
CSMD1-218ENST00000635120 VPS37DQ86XT2 251 aa11.07□□□□□ -0.64
CSMD1-218ENST00000635120 DHX16O60231 1041 aaKnown RBP11.06□□□□□ -0.64
CSMD1-218ENST00000635120 FAM43AQ8N2R8 423 aa11.06□□□□□ -0.64
CSMD1-218ENST00000635120 DDX19BQ9UMR2 479 aa11.06□□□□□ -0.64
CSMD1-218ENST00000635120 FANCIQ9NVI1 1328 aa11.06□□□□□ -0.64
CSMD1-218ENST00000635120 EIF2S2P20042 333 aaKnown RBP11.06□□□□□ -0.64
CSMD1-218ENST00000635120 EVC2Q86UK5 1308 aa11.06□□□□□ -0.64
CSMD1-218ENST00000635120 RAPGEF2Q9Y4G8 1499 aa11.06□□□□□ -0.64
CSMD1-218ENST00000635120 TTC5Q8N0Z6 440 aa11.05□□□□□ -0.64
CSMD1-218ENST00000635120 RNF20Q5VTR2 975 aa11.05□□□□□ -0.64
CSMD1-218ENST00000635120 CCDC47Q96A33 483 aaKnown RBP11.05□□□□□ -0.64
CSMD1-218ENST00000635120 NASPP49321 788 aaPredicted RBP11.05□□□□□ -0.64
CSMD1-218ENST00000635120 TEFQ10587 303 aa11.05□□□□□ -0.64
CSMD1-218ENST00000635120 SASS6Q6UVJ0 657 aa11.05□□□□□ -0.64
CSMD1-218ENST00000635120 MNS1Q8NEH6 495 aa11.05□□□□□ -0.64
CSMD1-218ENST00000635120 TRDNQ13061 729 aa11.04□□□□□ -0.64
CSMD1-218ENST00000635120 NOM1Q5C9Z4 860 aaKnown RBP11.04□□□□□ -0.64
CSMD1-218ENST00000635120 CCDC73Q6ZRK6 1079 aa11.04□□□□□ -0.64
CSMD1-218ENST00000635120 CTDP1Q9Y5B0 961 aaPredicted RBP11.04□□□□□ -0.64
CSMD1-218ENST00000635120 CCDC43Q96MW1 224 aaKnown RBP11.04□□□□□ -0.64
CSMD1-218ENST00000635120 ARGLU1Q9NWB6 273 aaPredicted RBP11.04□□□□□ -0.64
CSMD1-218ENST00000635120 SMC3Q9UQE7 1217 aa11.04□□□□□ -0.64
CSMD1-218ENST00000635120 DZIP1LQ8IYY4 767 aaKnown RBP11.04□□□□□ -0.64
CSMD1-218ENST00000635120 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
CSMD1-218ENST00000635120 CNKSR2Q8WXI2 1034 aa11.03□□□□□ -0.64
CSMD1-218ENST00000635120 CFAP65Q6ZU64 1925 aaKnown RBP11.03□□□□□ -0.64
CSMD1-218ENST00000635120 CT47A1Q5JQC4 288 aaPredicted RBP11.03□□□□□ -0.64
CSMD1-218ENST00000635120 CHMP5Q9NZZ3 219 aa11.03□□□□□ -0.64
CSMD1-218ENST00000635120 ACBD3Q9H3P7 528 aa11.03□□□□□ -0.64
CSMD1-218ENST00000635120 EPS15P42566 896 aa11.03□□□□□ -0.64
CSMD1-218ENST00000635120 CAGE1Q8TC20 777 aa11.03□□□□□ -0.64
CSMD1-218ENST00000635120 HSP90B2PQ58FF3 399 aa11.02□□□□□ -0.64
CSMD1-218ENST00000635120 TDRD9Q8NDG6 1382 aaKnown RBP11.02□□□□□ -0.64
CSMD1-218ENST00000635120 MINK1Q8N4C8 1332 aaPredicted RBP11.02□□□□□ -0.64
CSMD1-218ENST00000635120 G3BP1Q13283 466 aaKnown RBP eCLIP11.02□□□□□ -0.64
CSMD1-218ENST00000635120 PRKRIP1Q9H875 184 aaPredicted RBP11.02□□□□□ -0.65
CSMD1-218ENST00000635120 APAF1O14727 1248 aa11.02□□□□□ -0.65
CSMD1-218ENST00000635120 INTS3Q68E01 1043 aaKnown RBP11.02□□□□□ -0.65
CSMD1-218ENST00000635120 C22orf23Q9BZE7 217 aa11.02□□□□□ -0.65
CSMD1-218ENST00000635120 NAT10Q9H0A0 1025 aaKnown RBP11.02□□□□□ -0.65
CSMD1-218ENST00000635120 PDS5BQ9NTI5 1447 aa11.02□□□□□ -0.65
CSMD1-218ENST00000635120 SAFBQ15424 915 aaKnown RBP eCLIP11.02□□□□□ -0.65
CSMD1-218ENST00000635120 NUCB2P80303 420 aa11.01□□□□□ -0.65
CSMD1-218ENST00000635120 PDILTQ8N807 584 aa11.01□□□□□ -0.65
CSMD1-218ENST00000635120 EVA1CP58658 441 aa11.01□□□□□ -0.65
CSMD1-218ENST00000635120 BRPF3Q9ULD4 1205 aa11.01□□□□□ -0.65
CSMD1-218ENST00000635120 CCDC39Q9UFE4 941 aa11.01□□□□□ -0.65
CSMD1-218ENST00000635120 CUX1P39880 1505 aa11.01□□□□□ -0.65
CSMD1-218ENST00000635120 MAPK8IP2Q13387 824 aaPredicted RBP11.01□□□□□ -0.65
CSMD1-218ENST00000635120 DHX57Q6P158 1386 aaKnown RBP11.01□□□□□ -0.65
CSMD1-218ENST00000635120 NINLQ9Y2I6 1382 aa11□□□□□ -0.65
CSMD1-218ENST00000635120 RIPK4P57078 832 aa11□□□□□ -0.65
CSMD1-218ENST00000635120 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms