RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 DCAF11Q8TEB1 546 aa20.78■□□□□ 0.92
LINC00339-208ENST00000634934 SLIT1O75093 1534 aa20.77■□□□□ 0.92
LINC00339-208ENST00000634934 ARHGAP23Q9P227 1491 aa20.77■□□□□ 0.92
LINC00339-208ENST00000634934 TIMELESSQ9UNS1 1208 aa20.76■□□□□ 0.91
LINC00339-208ENST00000634934 KDM2AQ9Y2K7 1162 aa20.76■□□□□ 0.91
LINC00339-208ENST00000634934 TMEM2Q9UHN6 1383 aa20.75■□□□□ 0.91
LINC00339-208ENST00000634934 RPGRIP1LQ68CZ1 1315 aa20.75■□□□□ 0.91
LINC00339-208ENST00000634934 LTKP29376 864 aa20.74■□□□□ 0.91
LINC00339-208ENST00000634934 NUTM2DQ5VT03 806 aaPredicted RBP20.74■□□□□ 0.91
LINC00339-208ENST00000634934 ANKLE2Q86XL3 938 aa20.74■□□□□ 0.91
LINC00339-208ENST00000634934 IQGAP1P46940 1657 aa20.72■□□□□ 0.91
LINC00339-208ENST00000634934 RIMS2Q9UQ26 1411 aa20.72■□□□□ 0.91
LINC00339-208ENST00000634934 SCAF11Q99590 1463 aaKnown RBP20.72■□□□□ 0.91
LINC00339-208ENST00000634934 DMRT2Q9Y5R5 561 aa20.72■□□□□ 0.91
LINC00339-208ENST00000634934 HDGFP51858 240 aaKnown RBP20.71■□□□□ 0.91
LINC00339-208ENST00000634934 TXNDC2Q86VQ3 553 aa20.71■□□□□ 0.91
LINC00339-208ENST00000634934 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
LINC00339-208ENST00000634934 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
LINC00339-208ENST00000634934 MED14O60244 1454 aa20.7■□□□□ 0.9
LINC00339-208ENST00000634934 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.69■□□□□ 0.9
LINC00339-208ENST00000634934 EID1Q9Y6B2 187 aa20.69■□□□□ 0.9
LINC00339-208ENST00000634934 ZFYVE9O95405 1425 aa20.69■□□□□ 0.9
LINC00339-208ENST00000634934 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
LINC00339-208ENST00000634934 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
LINC00339-208ENST00000634934 NEXMIFQ5QGS0 1516 aa20.68■□□□□ 0.9
LINC00339-208ENST00000634934 STAC3Q96MF2 364 aa20.67■□□□□ 0.9
LINC00339-208ENST00000634934 ADGRF5Q8IZF2 1346 aa20.66■□□□□ 0.9
LINC00339-208ENST00000634934 PPLO60437 1756 aa20.65■□□□□ 0.9
LINC00339-208ENST00000634934 MYOM2P54296 1465 aa20.64■□□□□ 0.89
LINC00339-208ENST00000634934 BCANQ96GW7 911 aa20.63■□□□□ 0.89
LINC00339-208ENST00000634934 ZNF335Q9H4Z2 1342 aaPredicted RBP20.63■□□□□ 0.89
LINC00339-208ENST00000634934 IFT172Q9UG01 1749 aa20.63■□□□□ 0.89
LINC00339-208ENST00000634934 NBPF8Q3BBV2 869 aa20.62■□□□□ 0.89
LINC00339-208ENST00000634934 PRAG1Q86YV5 1406 aa20.6■□□□□ 0.89
LINC00339-208ENST00000634934 LTBP4Q8N2S1 1624 aa20.59■□□□□ 0.89
LINC00339-208ENST00000634934 SLC26A8Q96RN1 970 aa20.58■□□□□ 0.88
LINC00339-208ENST00000634934 PLEKHG1Q9ULL1 1385 aa20.58■□□□□ 0.88
LINC00339-208ENST00000634934 NRXN1Q9ULB1 1477 aa20.58■□□□□ 0.88
LINC00339-208ENST00000634934 STRCP1A6NGW2 1772 aa20.58■□□□□ 0.88
LINC00339-208ENST00000634934 PIK3C2GO75747 1445 aa20.56■□□□□ 0.88
LINC00339-208ENST00000634934 CFAP70Q5T0N1 1121 aa20.56■□□□□ 0.88
LINC00339-208ENST00000634934 NRXN3Q9Y4C0 1643 aa20.55■□□□□ 0.88
LINC00339-208ENST00000634934 C14orf93Q9H972 538 aaKnown RBP20.53■□□□□ 0.88
LINC00339-208ENST00000634934 ADAMTS13Q76LX8 1427 aa20.52■□□□□ 0.88
LINC00339-208ENST00000634934 NBPF1Q3BBV0 1214 aa20.51■□□□□ 0.87
LINC00339-208ENST00000634934 SETBP1Q9Y6X0 1596 aa20.5■□□□□ 0.87
LINC00339-208ENST00000634934 ROCK2O75116 1388 aaKnown RBP20.5■□□□□ 0.87
LINC00339-208ENST00000634934 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
LINC00339-208ENST00000634934 TMEM132EQ6IEE7 984 aa20.48■□□□□ 0.87
LINC00339-208ENST00000634934 CERKQ8TCT0 537 aa20.48■□□□□ 0.87
LINC00339-208ENST00000634934 RALGAPBQ86X10 1494 aa20.48■□□□□ 0.87
LINC00339-208ENST00000634934 DIP2AQ14689 1571 aa20.47■□□□□ 0.87
LINC00339-208ENST00000634934 TRPM1Q7Z4N2 1603 aa20.47■□□□□ 0.87
LINC00339-208ENST00000634934 CARD11Q9BXL7 1154 aa20.47■□□□□ 0.87
LINC00339-208ENST00000634934 TBX22Q9Y458 520 aa20.47■□□□□ 0.87
LINC00339-208ENST00000634934 CHD2O14647 1828 aaKnown RBP20.46■□□□□ 0.87
LINC00339-208ENST00000634934 CPS1P31327 1500 aa20.45■□□□□ 0.86
LINC00339-208ENST00000634934 SETD1AO15047 1707 aaKnown RBP20.45■□□□□ 0.86
LINC00339-208ENST00000634934 METP08581 1390 aa20.44■□□□□ 0.86
LINC00339-208ENST00000634934 KIAA1210Q9ULL0 1709 aa20.44■□□□□ 0.86
LINC00339-208ENST00000634934 LAMC1P11047 1609 aa20.44■□□□□ 0.86
LINC00339-208ENST00000634934 NWD1Q149M9 1564 aa20.43■□□□□ 0.86
LINC00339-208ENST00000634934 STK26Q9P289 416 aa20.43■□□□□ 0.86
LINC00339-208ENST00000634934 LRRC7Q96NW7 1537 aa20.42■□□□□ 0.86
LINC00339-208ENST00000634934 XIRP1Q702N8 1843 aaKnown RBP20.41■□□□□ 0.86
LINC00339-208ENST00000634934 GPRASP1Q5JY77 1395 aa20.41■□□□□ 0.86
LINC00339-208ENST00000634934 KCNA6P17658 529 aa20.41■□□□□ 0.86
LINC00339-208ENST00000634934 PTPRUQ92729 1446 aa20.41■□□□□ 0.86
LINC00339-208ENST00000634934 ADGRB1O14514 1584 aa20.41■□□□□ 0.86
LINC00339-208ENST00000634934 ASXL1Q8IXJ9 1541 aa20.4■□□□□ 0.86
LINC00339-208ENST00000634934 RBM33Q96EV2 1170 aaKnown RBP20.39■□□□□ 0.85
LINC00339-208ENST00000634934 TRAK1Q9UPV9 953 aa20.39■□□□□ 0.85
LINC00339-208ENST00000634934 YTHDC2Q9H6S0 1430 aaKnown RBP20.38■□□□□ 0.85
LINC00339-208ENST00000634934 XRN1Q8IZH2 1706 aaKnown RBP20.37■□□□□ 0.85
LINC00339-208ENST00000634934 AMOTL2Q9Y2J4 779 aa20.37■□□□□ 0.85
LINC00339-208ENST00000634934 LRPPRCP42704 1394 aaKnown RBP20.37■□□□□ 0.85
LINC00339-208ENST00000634934 PIK3R4Q99570 1358 aa20.37■□□□□ 0.85
LINC00339-208ENST00000634934 NKTRP30414 1462 aaKnown RBP20.36■□□□□ 0.85
LINC00339-208ENST00000634934 IQSEC2Q5JU85 1478 aa20.35■□□□□ 0.85
LINC00339-208ENST00000634934 USP47Q96K76 1375 aa20.34■□□□□ 0.85
LINC00339-208ENST00000634934 EIF4G2P78344 907 aaKnown RBP eCLIP20.34■□□□□ 0.85
LINC00339-208ENST00000634934 ABCC11Q96J66 1382 aa20.34■□□□□ 0.85
LINC00339-208ENST00000634934 PROSER2Q86WR7 435 aaPredicted RBP20.33■□□□□ 0.85
LINC00339-208ENST00000634934 TMEM94Q12767 1356 aa20.33■□□□□ 0.84
LINC00339-208ENST00000634934 EIF3AQ14152 1382 aaKnown RBP20.32■□□□□ 0.84
LINC00339-208ENST00000634934 HSPA5P11021 654 aaKnown RBP20.31■□□□□ 0.84
LINC00339-208ENST00000634934 HIRIP3Q9BW71 556 aaPredicted RBP20.3■□□□□ 0.84
LINC00339-208ENST00000634934 POGKQ9P215 609 aa20.3■□□□□ 0.84
LINC00339-208ENST00000634934 ST20-MTHFSA0A0A6YYL1 179 aa20.29■□□□□ 0.84
LINC00339-208ENST00000634934 SAFB2Q14151 953 aaKnown RBP eCLIP20.29■□□□□ 0.84
LINC00339-208ENST00000634934 PRAM1Q96QH2 718 aa20.29■□□□□ 0.84
LINC00339-208ENST00000634934 ROBO2Q9HCK4 1378 aa20.29■□□□□ 0.84
LINC00339-208ENST00000634934 WAPLQ7Z5K2 1190 aa20.28■□□□□ 0.84
LINC00339-208ENST00000634934 FBXO41Q8TF61 875 aa20.28■□□□□ 0.84
LINC00339-208ENST00000634934 TECPR2O15040 1411 aa20.28■□□□□ 0.84
LINC00339-208ENST00000634934 ILDR1Q86SU0 546 aaPredicted RBP20.27■□□□□ 0.84
LINC00339-208ENST00000634934 CENPJQ9HC77 1338 aaPredicted RBP20.27■□□□□ 0.84
LINC00339-208ENST00000634934 UBAP1LF5GYI3 381 aa20.27■□□□□ 0.83
LINC00339-208ENST00000634934 DLC1Q96QB1 1528 aa20.26■□□□□ 0.83
LINC00339-208ENST00000634934 SIRT1Q96EB6 747 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms