RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 HDGFP51858 240 aaKnown RBP21.78■■□□□ 1.08
CDC42BPB-209ENST00000634889 RIMS2Q9UQ26 1411 aa21.78■■□□□ 1.08
CDC42BPB-209ENST00000634889 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.75■■□□□ 1.07
CDC42BPB-209ENST00000634889 PLEKHG1Q9ULL1 1385 aa21.72■■□□□ 1.07
CDC42BPB-209ENST00000634889 NEXMIFQ5QGS0 1516 aa21.7■■□□□ 1.07
CDC42BPB-209ENST00000634889 LTBP4Q8N2S1 1624 aa21.7■■□□□ 1.06
CDC42BPB-209ENST00000634889 PPP1R15AO75807 674 aaPredicted RBP21.7■■□□□ 1.06
CDC42BPB-209ENST00000634889 ZNF326Q5BKZ1 582 aaKnown RBP21.7■■□□□ 1.06
CDC42BPB-209ENST00000634889 ANKRD30BQ9BXX2 1392 aa21.7■■□□□ 1.06
CDC42BPB-209ENST00000634889 SPATA31E1Q6ZUB1 1445 aa21.68■■□□□ 1.06
CDC42BPB-209ENST00000634889 RPGRIP1LQ68CZ1 1315 aa21.67■■□□□ 1.06
CDC42BPB-209ENST00000634889 ZNF335Q9H4Z2 1342 aaPredicted RBP21.67■■□□□ 1.06
CDC42BPB-209ENST00000634889 PPLO60437 1756 aa21.66■■□□□ 1.06
CDC42BPB-209ENST00000634889 DIP2AQ14689 1571 aa21.65■■□□□ 1.06
CDC42BPB-209ENST00000634889 CPS1P31327 1500 aa21.65■■□□□ 1.06
CDC42BPB-209ENST00000634889 SETBP1Q9Y6X0 1596 aa21.64■■□□□ 1.05
CDC42BPB-209ENST00000634889 IFT172Q9UG01 1749 aa21.63■■□□□ 1.05
CDC42BPB-209ENST00000634889 NUTM2DQ5VT03 806 aaPredicted RBP21.62■■□□□ 1.05
CDC42BPB-209ENST00000634889 CERKQ8TCT0 537 aa21.61■■□□□ 1.05
CDC42BPB-209ENST00000634889 BCANQ96GW7 911 aa21.61■■□□□ 1.05
CDC42BPB-209ENST00000634889 NRXN3Q9Y4C0 1643 aa21.61■■□□□ 1.05
CDC42BPB-209ENST00000634889 IQSEC2Q5JU85 1478 aa21.6■■□□□ 1.05
CDC42BPB-209ENST00000634889 VGFO15240 615 aaPredicted RBP21.6■■□□□ 1.05
CDC42BPB-209ENST00000634889 SLC26A8Q96RN1 970 aa21.6■■□□□ 1.05
CDC42BPB-209ENST00000634889 ADAMTS13Q76LX8 1427 aa21.6■■□□□ 1.05
CDC42BPB-209ENST00000634889 STRCP1A6NGW2 1772 aa21.59■■□□□ 1.05
CDC42BPB-209ENST00000634889 NWD1Q149M9 1564 aa21.58■■□□□ 1.05
CDC42BPB-209ENST00000634889 TBX22Q9Y458 520 aa21.58■■□□□ 1.05
CDC42BPB-209ENST00000634889 RGL3Q3MIN7 710 aa21.57■■□□□ 1.04
CDC42BPB-209ENST00000634889 DHX57Q6P158 1386 aaKnown RBP21.56■■□□□ 1.04
CDC42BPB-209ENST00000634889 PIK3R4Q99570 1358 aa21.56■■□□□ 1.04
CDC42BPB-209ENST00000634889 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
CDC42BPB-209ENST00000634889 NKTRP30414 1462 aaKnown RBP21.53■■□□□ 1.04
CDC42BPB-209ENST00000634889 MYOM2P54296 1465 aa21.53■■□□□ 1.04
CDC42BPB-209ENST00000634889 KCNA6P17658 529 aa21.53■■□□□ 1.04
CDC42BPB-209ENST00000634889 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
CDC42BPB-209ENST00000634889 SETD1AO15047 1707 aaKnown RBP21.52■■□□□ 1.03
CDC42BPB-209ENST00000634889 LRRC7Q96NW7 1537 aa21.51■■□□□ 1.03
CDC42BPB-209ENST00000634889 PCGF6Q9BYE7 350 aa21.51■■□□□ 1.03
CDC42BPB-209ENST00000634889 ALKQ9UM73 1620 aa21.5■■□□□ 1.03
CDC42BPB-209ENST00000634889 PIK3C2GO75747 1445 aa21.49■■□□□ 1.03
CDC42BPB-209ENST00000634889 NRXN1Q9ULB1 1477 aa21.49■■□□□ 1.03
CDC42BPB-209ENST00000634889 STAC3Q96MF2 364 aa21.48■■□□□ 1.03
CDC42BPB-209ENST00000634889 ADGRF5Q8IZF2 1346 aa21.48■■□□□ 1.03
CDC42BPB-209ENST00000634889 XRN1Q8IZH2 1706 aaKnown RBP21.46■■□□□ 1.03
CDC42BPB-209ENST00000634889 LAMC1P11047 1609 aa21.46■■□□□ 1.03
CDC42BPB-209ENST00000634889 METP08581 1390 aa21.46■■□□□ 1.03
CDC42BPB-209ENST00000634889 XIRP1Q702N8 1843 aaKnown RBP21.45■■□□□ 1.02
CDC42BPB-209ENST00000634889 PTPRUQ92729 1446 aa21.45■■□□□ 1.02
CDC42BPB-209ENST00000634889 FBXO41Q8TF61 875 aa21.44■■□□□ 1.02
CDC42BPB-209ENST00000634889 PRAG1Q86YV5 1406 aa21.41■■□□□ 1.02
CDC42BPB-209ENST00000634889 DCAF11Q8TEB1 546 aa21.41■■□□□ 1.02
CDC42BPB-209ENST00000634889 AMOTL2Q9Y2J4 779 aa21.41■■□□□ 1.02
CDC42BPB-209ENST00000634889 NCOA3Q9Y6Q9 1424 aa21.4■■□□□ 1.02
CDC42BPB-209ENST00000634889 TMEM94Q12767 1356 aa21.4■■□□□ 1.02
CDC42BPB-209ENST00000634889 PROSER2Q86WR7 435 aaPredicted RBP21.4■■□□□ 1.02
CDC42BPB-209ENST00000634889 SIN3AQ96ST3 1273 aa21.37■■□□□ 1.01
CDC42BPB-209ENST00000634889 C14orf93Q9H972 538 aaKnown RBP21.37■■□□□ 1.01
CDC42BPB-209ENST00000634889 PTCH1Q13635 1447 aa21.37■■□□□ 1.01
CDC42BPB-209ENST00000634889 ASXL1Q8IXJ9 1541 aa21.36■■□□□ 1.01
CDC42BPB-209ENST00000634889 KDM2AQ9Y2K7 1162 aa21.35■■□□□ 1.01
CDC42BPB-209ENST00000634889 KNDC1Q76NI1 1749 aa21.35■■□□□ 1.01
CDC42BPB-209ENST00000634889 TECPR2O15040 1411 aa21.33■■□□□ 1.01
CDC42BPB-209ENST00000634889 TOM1O60784 492 aa21.33■■□□□ 1.01
CDC42BPB-209ENST00000634889 NEUROD1Q13562 356 aa21.33■■□□□ 1.01
CDC42BPB-209ENST00000634889 UBAP1LF5GYI3 381 aa21.32■■□□□ 1
CDC42BPB-209ENST00000634889 LRPPRCP42704 1394 aaKnown RBP21.32■■□□□ 1
CDC42BPB-209ENST00000634889 MSH6P52701 1360 aa21.32■■□□□ 1
CDC42BPB-209ENST00000634889 KIAA1210Q9ULL0 1709 aa21.32■■□□□ 1
CDC42BPB-209ENST00000634889 CFAP70Q5T0N1 1121 aa21.31■■□□□ 1
CDC42BPB-209ENST00000634889 ILDR1Q86SU0 546 aaPredicted RBP21.31■■□□□ 1
CDC42BPB-209ENST00000634889 ADGRB1O14514 1584 aa21.31■■□□□ 1
CDC42BPB-209ENST00000634889 L3MBTL2Q969R5 705 aa21.3■■□□□ 1
CDC42BPB-209ENST00000634889 RBM33Q96EV2 1170 aaKnown RBP21.3■■□□□ 1
CDC42BPB-209ENST00000634889 ABCC11Q96J66 1382 aa21.3■■□□□ 1
CDC42BPB-209ENST00000634889 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
CDC42BPB-209ENST00000634889 YTHDC2Q9H6S0 1430 aaKnown RBP21.29■■□□□ 1
CDC42BPB-209ENST00000634889 ROBO2Q9HCK4 1378 aa21.29■■□□□ 1
CDC42BPB-209ENST00000634889 TMEM132EQ6IEE7 984 aa21.28■■□□□ 1
CDC42BPB-209ENST00000634889 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.28■■□□□ 1
CDC42BPB-209ENST00000634889 DCCP43146 1447 aa21.28■■□□□ 1
CDC42BPB-209ENST00000634889 C14orf37Q86TY3 774 aa21.27■■□□□ 1
CDC42BPB-209ENST00000634889 NALCNQ8IZF0 1738 aa21.26■□□□□ 0.99
CDC42BPB-209ENST00000634889 C19orf44Q9H6X5 657 aa21.26■□□□□ 0.99
CDC42BPB-209ENST00000634889 ADGRL3Q9HAR2 1447 aa21.26■□□□□ 0.99
CDC42BPB-209ENST00000634889 TONSLQ96HA7 1378 aa21.25■□□□□ 0.99
CDC42BPB-209ENST00000634889 DLC1Q96QB1 1528 aa21.24■□□□□ 0.99
CDC42BPB-209ENST00000634889 FAM135BQ49AJ0 1406 aa21.24■□□□□ 0.99
CDC42BPB-209ENST00000634889 SIRT1Q96EB6 747 aa21.23■□□□□ 0.99
CDC42BPB-209ENST00000634889 STK26Q9P289 416 aa21.23■□□□□ 0.99
CDC42BPB-209ENST00000634889 CADPS2Q86UW7 1296 aa21.22■□□□□ 0.99
CDC42BPB-209ENST00000634889 TRPM1Q7Z4N2 1603 aa21.2■□□□□ 0.98
CDC42BPB-209ENST00000634889 ATF3P18847 181 aa21.2■□□□□ 0.98
CDC42BPB-209ENST00000634889 PIP4K2BP78356 416 aa21.2■□□□□ 0.98
CDC42BPB-209ENST00000634889 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
CDC42BPB-209ENST00000634889 CDC42BPGQ6DT37 1551 aa21.18■□□□□ 0.98
CDC42BPB-209ENST00000634889 SLAIN2Q9P270 581 aa21.17■□□□□ 0.98
CDC42BPB-209ENST00000634889 ARHGEF28Q8N1W1 1705 aaKnown RBP21.16■□□□□ 0.98
CDC42BPB-209ENST00000634889 ROBO1Q9Y6N7 1651 aa21.16■□□□□ 0.98
CDC42BPB-209ENST00000634889 WAPLQ7Z5K2 1190 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms