RNA–Protein interactions for RNA: ENST00000631315.1

SPTAN1-226, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-226ENST00000631315 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
SPTAN1-226ENST00000631315 MED14O60244 1454 aa19.27■□□□□ 0.67
SPTAN1-226ENST00000631315 NEURL4Q96JN8 1562 aa19.27■□□□□ 0.67
SPTAN1-226ENST00000631315 CLTCL1P53675 1640 aa19.26■□□□□ 0.67
SPTAN1-226ENST00000631315 POLR1AO95602 1720 aaPredicted RBP19.26■□□□□ 0.67
SPTAN1-226ENST00000631315 ZFYVE9O95405 1425 aa19.24■□□□□ 0.67
SPTAN1-226ENST00000631315 ZNF335Q9H4Z2 1342 aaPredicted RBP19.24■□□□□ 0.67
SPTAN1-226ENST00000631315 RGL3Q3MIN7 710 aa19.23■□□□□ 0.67
SPTAN1-226ENST00000631315 SLC26A8Q96RN1 970 aa19.23■□□□□ 0.67
SPTAN1-226ENST00000631315 FBXO41Q8TF61 875 aa19.22■□□□□ 0.67
SPTAN1-226ENST00000631315 PCGF6Q9BYE7 350 aa19.22■□□□□ 0.67
SPTAN1-226ENST00000631315 ANKRD30BQ9BXX2 1392 aa19.21■□□□□ 0.67
SPTAN1-226ENST00000631315 IQGAP1P46940 1657 aa19.21■□□□□ 0.67
SPTAN1-226ENST00000631315 MYO5BQ9ULV0 1848 aa19.21■□□□□ 0.67
SPTAN1-226ENST00000631315 RPGRIP1LQ68CZ1 1315 aa19.2■□□□□ 0.66
SPTAN1-226ENST00000631315 PLEKHG1Q9ULL1 1385 aa19.19■□□□□ 0.66
SPTAN1-226ENST00000631315 VGFO15240 615 aaPredicted RBP19.19■□□□□ 0.66
SPTAN1-226ENST00000631315 CERKQ8TCT0 537 aa19.18■□□□□ 0.66
SPTAN1-226ENST00000631315 KIF1BO60333 1816 aa19.18■□□□□ 0.66
SPTAN1-226ENST00000631315 SPATA31E1Q6ZUB1 1445 aa19.15■□□□□ 0.66
SPTAN1-226ENST00000631315 TBX22Q9Y458 520 aa19.14■□□□□ 0.65
SPTAN1-226ENST00000631315 NEXMIFQ5QGS0 1516 aa19.12■□□□□ 0.65
SPTAN1-226ENST00000631315 LTBP4Q8N2S1 1624 aa19.11■□□□□ 0.65
SPTAN1-226ENST00000631315 KCNA6P17658 529 aa19.1■□□□□ 0.65
SPTAN1-226ENST00000631315 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
SPTAN1-226ENST00000631315 ADAMTS13Q76LX8 1427 aa19.08■□□□□ 0.65
SPTAN1-226ENST00000631315 ADGRF5Q8IZF2 1346 aa19.07■□□□□ 0.64
SPTAN1-226ENST00000631315 CPS1P31327 1500 aa19.07■□□□□ 0.64
SPTAN1-226ENST00000631315 DCAF11Q8TEB1 546 aa19.06■□□□□ 0.64
SPTAN1-226ENST00000631315 KDM2AQ9Y2K7 1162 aa19.06■□□□□ 0.64
SPTAN1-226ENST00000631315 NEUROD1Q13562 356 aa19.05■□□□□ 0.64
SPTAN1-226ENST00000631315 PROSER2Q86WR7 435 aaPredicted RBP19.05■□□□□ 0.64
SPTAN1-226ENST00000631315 SIN3AQ96ST3 1273 aa19.04■□□□□ 0.64
SPTAN1-226ENST00000631315 SETBP1Q9Y6X0 1596 aa19.04■□□□□ 0.64
SPTAN1-226ENST00000631315 AMOTL2Q9Y2J4 779 aa19.03■□□□□ 0.64
SPTAN1-226ENST00000631315 PIK3R4Q99570 1358 aa19.03■□□□□ 0.64
SPTAN1-226ENST00000631315 DIP2AQ14689 1571 aa19.02■□□□□ 0.64
SPTAN1-226ENST00000631315 PPLO60437 1756 aa19.02■□□□□ 0.64
SPTAN1-226ENST00000631315 METP08581 1390 aa19.02■□□□□ 0.64
SPTAN1-226ENST00000631315 RBM33Q96EV2 1170 aaKnown RBP19.01■□□□□ 0.63
SPTAN1-226ENST00000631315 STAC3Q96MF2 364 aa19.01■□□□□ 0.63
SPTAN1-226ENST00000631315 LRRC7Q96NW7 1537 aa19■□□□□ 0.63
SPTAN1-226ENST00000631315 NRXN3Q9Y4C0 1643 aa18.99■□□□□ 0.63
SPTAN1-226ENST00000631315 STRCP1A6NGW2 1772 aa18.98■□□□□ 0.63
SPTAN1-226ENST00000631315 IQSEC2Q5JU85 1478 aa18.98■□□□□ 0.63
SPTAN1-226ENST00000631315 UBAP1LF5GYI3 381 aa18.98■□□□□ 0.63
SPTAN1-226ENST00000631315 TMEM94Q12767 1356 aa18.97■□□□□ 0.63
SPTAN1-226ENST00000631315 C14orf37Q86TY3 774 aa18.97■□□□□ 0.63
SPTAN1-226ENST00000631315 PIK3C2GO75747 1445 aa18.97■□□□□ 0.63
SPTAN1-226ENST00000631315 NKTRP30414 1462 aaKnown RBP18.97■□□□□ 0.63
SPTAN1-226ENST00000631315 MYOM2P54296 1465 aa18.97■□□□□ 0.63
SPTAN1-226ENST00000631315 ALKQ9UM73 1620 aa18.96■□□□□ 0.63
SPTAN1-226ENST00000631315 CFAP70Q5T0N1 1121 aa18.96■□□□□ 0.63
SPTAN1-226ENST00000631315 C14orf93Q9H972 538 aaKnown RBP18.96■□□□□ 0.63
SPTAN1-226ENST00000631315 PTPRUQ92729 1446 aa18.96■□□□□ 0.63
SPTAN1-226ENST00000631315 TOM1O60784 492 aa18.95■□□□□ 0.62
SPTAN1-226ENST00000631315 TMEM132EQ6IEE7 984 aa18.95■□□□□ 0.62
SPTAN1-226ENST00000631315 IFT172Q9UG01 1749 aa18.94■□□□□ 0.62
SPTAN1-226ENST00000631315 NWD1Q149M9 1564 aa18.94■□□□□ 0.62
SPTAN1-226ENST00000631315 L3MBTL2Q969R5 705 aa18.94■□□□□ 0.62
SPTAN1-226ENST00000631315 STK26Q9P289 416 aa18.94■□□□□ 0.62
SPTAN1-226ENST00000631315 CHD2O14647 1828 aaKnown RBP18.93■□□□□ 0.62
SPTAN1-226ENST00000631315 NRXN1Q9ULB1 1477 aa18.93■□□□□ 0.62
SPTAN1-226ENST00000631315 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
SPTAN1-226ENST00000631315 PIP4K2BP78356 416 aa18.9■□□□□ 0.62
SPTAN1-226ENST00000631315 MSH6P52701 1360 aa18.9■□□□□ 0.62
SPTAN1-226ENST00000631315 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
SPTAN1-226ENST00000631315 C19orf44Q9H6X5 657 aa18.88■□□□□ 0.61
SPTAN1-226ENST00000631315 TONSLQ96HA7 1378 aa18.88■□□□□ 0.61
SPTAN1-226ENST00000631315 LRPPRCP42704 1394 aaKnown RBP18.87■□□□□ 0.61
SPTAN1-226ENST00000631315 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
SPTAN1-226ENST00000631315 ROBO2Q9HCK4 1378 aa18.86■□□□□ 0.61
SPTAN1-226ENST00000631315 ATF3P18847 181 aa18.86■□□□□ 0.61
SPTAN1-226ENST00000631315 SETD1AO15047 1707 aaKnown RBP18.86■□□□□ 0.61
SPTAN1-226ENST00000631315 XRN1Q8IZH2 1706 aaKnown RBP18.86■□□□□ 0.61
SPTAN1-226ENST00000631315 YTHDC2Q9H6S0 1430 aaKnown RBP18.85■□□□□ 0.61
SPTAN1-226ENST00000631315 ABCC11Q96J66 1382 aa18.85■□□□□ 0.61
SPTAN1-226ENST00000631315 PTCH1Q13635 1447 aa18.83■□□□□ 0.61
SPTAN1-226ENST00000631315 CLSPNQ9HAW4 1339 aa18.83■□□□□ 0.61
SPTAN1-226ENST00000631315 WAPLQ7Z5K2 1190 aa18.83■□□□□ 0.6
SPTAN1-226ENST00000631315 CADPS2Q86UW7 1296 aa18.83■□□□□ 0.6
SPTAN1-226ENST00000631315 PRAG1Q86YV5 1406 aa18.83■□□□□ 0.6
SPTAN1-226ENST00000631315 LAMC1P11047 1609 aa18.82■□□□□ 0.6
SPTAN1-226ENST00000631315 SLAIN2Q9P270 581 aa18.82■□□□□ 0.6
SPTAN1-226ENST00000631315 TRAK1Q9UPV9 953 aa18.82■□□□□ 0.6
SPTAN1-226ENST00000631315 XIRP1Q702N8 1843 aaKnown RBP18.81■□□□□ 0.6
SPTAN1-226ENST00000631315 ASXL1Q8IXJ9 1541 aa18.81■□□□□ 0.6
SPTAN1-226ENST00000631315 POGKQ9P215 609 aa18.8■□□□□ 0.6
SPTAN1-226ENST00000631315 TECPR2O15040 1411 aa18.8■□□□□ 0.6
SPTAN1-226ENST00000631315 NBPF1Q3BBV0 1214 aa18.79■□□□□ 0.6
SPTAN1-226ENST00000631315 SIRT1Q96EB6 747 aa18.79■□□□□ 0.6
SPTAN1-226ENST00000631315 PRAM1Q96QH2 718 aa18.79■□□□□ 0.6
SPTAN1-226ENST00000631315 ADGRL3Q9HAR2 1447 aa18.78■□□□□ 0.6
SPTAN1-226ENST00000631315 SAFB2Q14151 953 aaKnown RBP eCLIP18.78■□□□□ 0.6
SPTAN1-226ENST00000631315 ADGRB1O14514 1584 aa18.76■□□□□ 0.59
SPTAN1-226ENST00000631315 FAM135BQ49AJ0 1406 aa18.76■□□□□ 0.59
SPTAN1-226ENST00000631315 PLEKHH1Q9ULM0 1364 aa18.76■□□□□ 0.59
SPTAN1-226ENST00000631315 NBPF8Q3BBV2 869 aa18.75■□□□□ 0.59
SPTAN1-226ENST00000631315 DCCP43146 1447 aa18.74■□□□□ 0.59
SPTAN1-226ENST00000631315 TIMELESSQ9UNS1 1208 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms